RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 LINC00269Q8N2A0 174 aa6.71□□□□□ -1.34
PTPRD-207ENST00000463477 CHCHD10Q8WYQ3 142 aaPredicted RBP6.71□□□□□ -1.34
PTPRD-207ENST00000463477 A0A096LPF7 62 aa6.7□□□□□ -1.34
PTPRD-207ENST00000463477 NDUFC2O95298 119 aa6.7□□□□□ -1.34
PTPRD-207ENST00000463477 MT-ATP8P03928 68 aa6.7□□□□□ -1.34
PTPRD-207ENST00000463477 HTN3P15516 51 aa6.7□□□□□ -1.34
PTPRD-207ENST00000463477 PRR34Q9NV39 138 aa6.7□□□□□ -1.34
PTPRD-207ENST00000463477 ANGP03950 147 aaKnown RBP6.69□□□□□ -1.34
PTPRD-207ENST00000463477 CKS1BP61024 79 aa6.69□□□□□ -1.34
PTPRD-207ENST00000463477 ACYP1P07311 99 aa6.68□□□□□ -1.34
PTPRD-207ENST00000463477 PFN2P35080 140 aa6.68□□□□□ -1.34
PTPRD-207ENST00000463477 CFAP161Q6P656 301 aa6.68□□□□□ -1.34
PTPRD-207ENST00000463477 C15orf53Q8NAA6 179 aa6.68□□□□□ -1.34
PTPRD-207ENST00000463477 SMIM11BQ8TCY0 68 aa6.68□□□□□ -1.34
PTPRD-207ENST00000463477 Q6Q795 121 aa6.68□□□□□ -1.34
PTPRD-207ENST00000463477 CLPSL2Q6UWE3 100 aa6.68□□□□□ -1.34
PTPRD-207ENST00000463477 FAM218AQ96MZ4 157 aa6.68□□□□□ -1.34
PTPRD-207ENST00000463477 BAALC-AS2P0C853 105 aa6.67□□□□□ -1.34
PTPRD-207ENST00000463477 A0A1B0GX51 115 aa6.66□□□□□ -1.34
PTPRD-207ENST00000463477 MALP21145 153 aa6.66□□□□□ -1.34
PTPRD-207ENST00000463477 A0A1B0GV72 72 aa6.65□□□□□ -1.34
PTPRD-207ENST00000463477 INAFM2P0DMQ5 153 aa6.65□□□□□ -1.34
PTPRD-207ENST00000463477 LYPD5Q6UWN5 251 aa6.65□□□□□ -1.34
PTPRD-207ENST00000463477 C22orf24Q9Y442 160 aa6.65□□□□□ -1.34
PTPRD-207ENST00000463477 GVQW2A0A096LPI5 108 aaPredicted RBP6.65□□□□□ -1.35
PTPRD-207ENST00000463477 SNCGO76070 127 aa6.65□□□□□ -1.35
PTPRD-207ENST00000463477 DNAL4O96015 105 aa6.64□□□□□ -1.35
PTPRD-207ENST00000463477 Q8N3U1 123 aa6.64□□□□□ -1.35
PTPRD-207ENST00000463477 DNAH6Q9C0G6 4158 aa6.64□□□□□ -1.35
PTPRD-207ENST00000463477 IGLV10-54A0A075B6I4 117 aa6.63□□□□□ -1.35
PTPRD-207ENST00000463477 LINC00167Q96N53 147 aa6.63□□□□□ -1.35
PTPRD-207ENST00000463477 TMEM126AQ9H061 195 aa6.63□□□□□ -1.35
PTPRD-207ENST00000463477 SPAG11BQ08648 103 aa6.62□□□□□ -1.35
PTPRD-207ENST00000463477 ENHOQ6UWT2 76 aa6.62□□□□□ -1.35
PTPRD-207ENST00000463477 SDIM1Q6ZPB5 146 aa6.62□□□□□ -1.35
PTPRD-207ENST00000463477 OR13C6PQ8NH95 151 aa6.62□□□□□ -1.35
PTPRD-207ENST00000463477 OBSCN-AS1Q96MR7 158 aa6.62□□□□□ -1.35
PTPRD-207ENST00000463477 A0A087WYN8 130 aa6.61□□□□□ -1.35
PTPRD-207ENST00000463477 GAGE2BQ13066 116 aa6.61□□□□□ -1.35
PTPRD-207ENST00000463477 GAGE2EQ4V326 116 aa6.61□□□□□ -1.35
PTPRD-207ENST00000463477 UBE2DNLQ8IWF7 75 aa6.61□□□□□ -1.35
PTPRD-207ENST00000463477 GAGE2DQ9UEU5 116 aa6.61□□□□□ -1.35
PTPRD-207ENST00000463477 KLK12Q9UKR0 248 aa6.61□□□□□ -1.35
PTPRD-207ENST00000463477 TRBV7-7A0A0K0K1E9 115 aa6.6□□□□□ -1.35
PTPRD-207ENST00000463477 Q9HAA7 133 aa6.6□□□□□ -1.35
PTPRD-207ENST00000463477 DNAH10Q8IVF4 4471 aa6.6□□□□□ -1.35
PTPRD-207ENST00000463477 LECT2O14960 151 aa6.59□□□□□ -1.35
PTPRD-207ENST00000463477 IMUPQ9GZP8 106 aa6.59□□□□□ -1.35
PTPRD-207ENST00000463477 LINC00588Q9Y4M8 146 aa6.59□□□□□ -1.35
PTPRD-207ENST00000463477 F8WDY8 70 aa6.58□□□□□ -1.36
PTPRD-207ENST00000463477 ESRGQ1W209 222 aa6.58□□□□□ -1.36
PTPRD-207ENST00000463477 UNQ6190/PRO20217Q6UXQ8 127 aa6.58□□□□□ -1.36
PTPRD-207ENST00000463477 ORMDL1Q9P0S3 153 aa6.58□□□□□ -1.36
PTPRD-207ENST00000463477 DNAH2Q9P225 4427 aa6.58□□□□□ -1.36
PTPRD-207ENST00000463477 C9orf116Q5BN46 136 aaPredicted RBP6.58□□□□□ -1.36
PTPRD-207ENST00000463477 C10orf25Q5T742 122 aa6.58□□□□□ -1.36
PTPRD-207ENST00000463477 KRTAP26-1Q6PEX3 210 aa6.58□□□□□ -1.36
PTPRD-207ENST00000463477 Q6ZR54 194 aa6.58□□□□□ -1.36
PTPRD-207ENST00000463477 LINC00643Q86TS7 51 aa6.58□□□□□ -1.36
PTPRD-207ENST00000463477 UPK3BQ9BT76 320 aa6.58□□□□□ -1.36
PTPRD-207ENST00000463477 FRAS1Q86XX4 4008 aa6.58□□□□□ -1.36
PTPRD-207ENST00000463477 EPPK1P58107 5090 aaKnown RBP6.57□□□□□ -1.36
PTPRD-207ENST00000463477 C6orf223Q8N319 242 aa6.57□□□□□ -1.36
PTPRD-207ENST00000463477 M0R2N4 97 aa6.56□□□□□ -1.36
PTPRD-207ENST00000463477 IGLV6-57P01721 117 aa6.56□□□□□ -1.36
PTPRD-207ENST00000463477 WFDC10BQ8IUB3 73 aa6.56□□□□□ -1.36
PTPRD-207ENST00000463477 Q8N814 137 aa6.56□□□□□ -1.36
PTPRD-207ENST00000463477 C2orf48Q96LS8 159 aa6.56□□□□□ -1.36
PTPRD-207ENST00000463477 NDUFV3P56181 108 aaKnown RBP6.55□□□□□ -1.36
PTPRD-207ENST00000463477 TTC32Q5I0X7 151 aa6.55□□□□□ -1.36
PTPRD-207ENST00000463477 LINC01556Q5JQF7 62 aa6.55□□□□□ -1.36
PTPRD-207ENST00000463477 Q8NDZ9 215 aa6.55□□□□□ -1.36
PTPRD-207ENST00000463477 C6orf48Q9UBA6 75 aa6.55□□□□□ -1.36
PTPRD-207ENST00000463477 JMJD7-PLA2G4BH0Y9G9 81 aa6.55□□□□□ -1.36
PTPRD-207ENST00000463477 H3BQ85 93 aa6.55□□□□□ -1.36
PTPRD-207ENST00000463477 TMEM256-PLSCR3K7ERE1 68 aa6.55□□□□□ -1.36
PTPRD-207ENST00000463477 PRR3P79522 188 aaKnown RBP6.55□□□□□ -1.36
PTPRD-207ENST00000463477 S100A7L2Q5SY68 101 aa6.55□□□□□ -1.36
PTPRD-207ENST00000463477 ANAPC13Q9BS18 74 aa6.55□□□□□ -1.36
PTPRD-207ENST00000463477 NBDYA0A0U1RRE5 68 aa6.54□□□□□ -1.36
PTPRD-207ENST00000463477 LINC00336Q6ZUF6 198 aa6.54□□□□□ -1.36
PTPRD-207ENST00000463477 DNAH17Q9UFH2 4485 aa6.53□□□□□ -1.36
PTPRD-207ENST00000463477 ZNF561-AS1K7EIQ3 104 aa6.53□□□□□ -1.36
PTPRD-207ENST00000463477 NCR3O14931 201 aa6.53□□□□□ -1.36
PTPRD-207ENST00000463477 C6orf99Q4VX62 202 aa6.53□□□□□ -1.36
PTPRD-207ENST00000463477 LINC00575Q6W349 94 aa6.53□□□□□ -1.36
PTPRD-207ENST00000463477 SMCR5Q8TEV8 140 aa6.53□□□□□ -1.36
PTPRD-207ENST00000463477 FAT2Q9NYQ8 4349 aa6.53□□□□□ -1.36
PTPRD-207ENST00000463477 TRBV7-6A0A0J9YX20 115 aa6.52□□□□□ -1.37
PTPRD-207ENST00000463477 RTL8CO15255 209 aa6.52□□□□□ -1.37
PTPRD-207ENST00000463477 C1orf134Q5TEV5 83 aa6.52□□□□□ -1.37
PTPRD-207ENST00000463477 GAGE2AQ6NT46 116 aa6.52□□□□□ -1.37
PTPRD-207ENST00000463477 DNAH10OSP0CZ25 163 aa6.52□□□□□ -1.37
PTPRD-207ENST00000463477 C9orf129Q5T035 196 aaKnown RBP6.52□□□□□ -1.37
PTPRD-207ENST00000463477 C15orf56Q8N910 161 aa6.52□□□□□ -1.37
PTPRD-207ENST00000463477 SLPIP03973 132 aa6.51□□□□□ -1.37
PTPRD-207ENST00000463477 LINC00526Q96FQ7 95 aa6.51□□□□□ -1.37
PTPRD-207ENST00000463477 CAMK2N2Q96S95 79 aa6.51□□□□□ -1.37
PTPRD-207ENST00000463477 C1orf43Q9BWL3 253 aa6.51□□□□□ -1.37
PTPRD-207ENST00000463477 C14orf132Q9NPU4 83 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms