RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 SYS1-DBNDD2H3BUS1 97 aa3.57□□□□□ -1.84
VPS36-202ENST00000462289 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
VPS36-202ENST00000462289 PLNP26678 52 aa3.57□□□□□ -1.84
VPS36-202ENST00000462289 C9orf129Q5T035 196 aaKnown RBP3.57□□□□□ -1.84
VPS36-202ENST00000462289 SFTA2Q6UW10 78 aa3.57□□□□□ -1.84
VPS36-202ENST00000462289 FAT3Q8TDW7 4589 aa3.57□□□□□ -1.84
VPS36-202ENST00000462289 COX7B2Q8TF08 81 aa3.57□□□□□ -1.84
VPS36-202ENST00000462289 DMBT1Q9UGM3 2413 aaPredicted RBP3.57□□□□□ -1.84
VPS36-202ENST00000462289 IGLV5-37A0A075B6J1 123 aa3.56□□□□□ -1.84
VPS36-202ENST00000462289 LOC107984156A0A0G2JMH3 177 aa3.56□□□□□ -1.84
VPS36-202ENST00000462289 A0A1W2PNN7 141 aa3.56□□□□□ -1.84
VPS36-202ENST00000462289 PRSS2P07478 247 aa3.56□□□□□ -1.84
VPS36-202ENST00000462289 SPINK8P0C7L1 97 aa3.56□□□□□ -1.84
VPS36-202ENST00000462289 HAMPP81172 84 aa3.56□□□□□ -1.84
VPS36-202ENST00000462289 COX17Q14061 63 aa3.56□□□□□ -1.84
VPS36-202ENST00000462289 Q5VSD8 79 aa3.56□□□□□ -1.84
VPS36-202ENST00000462289 PET117Q6UWS5 81 aa3.56□□□□□ -1.84
VPS36-202ENST00000462289 ARL17AQ8IVW1 177 aa3.56□□□□□ -1.84
VPS36-202ENST00000462289 C5orf52A6NGY3 159 aa3.55□□□□□ -1.84
VPS36-202ENST00000462289 DPM2O94777 84 aa3.55□□□□□ -1.84
VPS36-202ENST00000462289 C3orf79P0CE67 100 aa3.55□□□□□ -1.84
VPS36-202ENST00000462289 TSPEAR-AS2P59090 65 aa3.55□□□□□ -1.84
VPS36-202ENST00000462289 C9orf116Q5BN46 136 aaPredicted RBP3.55□□□□□ -1.84
VPS36-202ENST00000462289 C6orf226Q5I0X4 101 aa3.55□□□□□ -1.84
VPS36-202ENST00000462289 HIST3H2BBQ8N257 126 aa3.55□□□□□ -1.84
VPS36-202ENST00000462289 TP73-AS1Q9UF72 201 aa3.55□□□□□ -1.84
VPS36-202ENST00000462289 E9PLD3 99 aa3.54□□□□□ -1.84
VPS36-202ENST00000462289 SMR3BP02814 79 aaPredicted RBP3.54□□□□□ -1.84
VPS36-202ENST00000462289 FABP4P15090 132 aa3.54□□□□□ -1.84
VPS36-202ENST00000462289 KRTAP10-5P60370 271 aa3.54□□□□□ -1.84
VPS36-202ENST00000462289 CKS1BP61024 79 aa3.54□□□□□ -1.84
VPS36-202ENST00000462289 KRTAP11-1Q8IUC1 163 aa3.54□□□□□ -1.84
VPS36-202ENST00000462289 STPG4Q8N801 248 aa3.54□□□□□ -1.84
VPS36-202ENST00000462289 HIST1H2BLQ99880 126 aa3.54□□□□□ -1.84
VPS36-202ENST00000462289 MAP1LC3CQ9BXW4 147 aa3.54□□□□□ -1.84
VPS36-202ENST00000462289 IGKV2-24A0A0C4DH68 120 aa3.53□□□□□ -1.84
VPS36-202ENST00000462289 LEPROTO15243 131 aa3.53□□□□□ -1.84
VPS36-202ENST00000462289 IGKCP01834 107 aa3.53□□□□□ -1.84
VPS36-202ENST00000462289 HNRNPA3P51991 378 aaKnown RBP3.53□□□□□ -1.84
VPS36-202ENST00000462289 NDUFA6P56556 154 aa3.53□□□□□ -1.84
VPS36-202ENST00000462289 PRR3P79522 188 aaKnown RBP3.53□□□□□ -1.84
VPS36-202ENST00000462289 SRSF9Q13242 221 aaKnown RBP eCLIP3.53□□□□□ -1.84
VPS36-202ENST00000462289 MAJINQ3KP22 176 aa3.53□□□□□ -1.84
VPS36-202ENST00000462289 TMEM170BQ5T4T1 132 aa3.53□□□□□ -1.84
VPS36-202ENST00000462289 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
VPS36-202ENST00000462289 TOMM7Q9P0U1 55 aa3.53□□□□□ -1.84
VPS36-202ENST00000462289 ERG28Q9UKR5 140 aa3.53□□□□□ -1.84
VPS36-202ENST00000462289 TNXBP22105 4242 aa3.52□□□□□ -1.85
VPS36-202ENST00000462289 FAM168BA1KXE4 195 aa3.52□□□□□ -1.85
VPS36-202ENST00000462289 NMUP48645 174 aa3.52□□□□□ -1.85
VPS36-202ENST00000462289 HERV-K104P63124 156 aa3.52□□□□□ -1.85
VPS36-202ENST00000462289 RPL18AQ02543 176 aaKnown RBP3.52□□□□□ -1.85
VPS36-202ENST00000462289 GAGE2BQ13066 116 aa3.52□□□□□ -1.85
VPS36-202ENST00000462289 SERTAD4-AS1Q5TG53 156 aa3.52□□□□□ -1.85
VPS36-202ENST00000462289 Q8NDZ9 215 aa3.52□□□□□ -1.85
VPS36-202ENST00000462289 PLEKHB2Q96CS7 222 aa3.52□□□□□ -1.85
VPS36-202ENST00000462289 LITAFQ99732 161 aa3.52□□□□□ -1.85
VPS36-202ENST00000462289 PMCHL2Q9BQD1 86 aa3.52□□□□□ -1.85
VPS36-202ENST00000462289 PPDPFQ9H3Y8 114 aa3.52□□□□□ -1.85
VPS36-202ENST00000462289 IGKV2D-26A0A0A0MRZ7 120 aa3.51□□□□□ -1.85
VPS36-202ENST00000462289 J3QQQ9 107 aa3.51□□□□□ -1.85
VPS36-202ENST00000462289 VPREB1P12018 145 aa3.51□□□□□ -1.85
VPS36-202ENST00000462289 AKR1D1P51857 326 aa3.51□□□□□ -1.85
VPS36-202ENST00000462289 SND1-IT1Q9HBX3 110 aa3.51□□□□□ -1.85
VPS36-202ENST00000462289 NDUFA12Q9UI09 145 aa3.51□□□□□ -1.85
VPS36-202ENST00000462289 TIMM17BO60830 172 aa3.5□□□□□ -1.85
VPS36-202ENST00000462289 RPL37AP61513 92 aaKnown RBP3.5□□□□□ -1.85
VPS36-202ENST00000462289 GAGE2EQ4V326 116 aa3.5□□□□□ -1.85
VPS36-202ENST00000462289 KRTAP13-1Q8IUC0 172 aa3.5□□□□□ -1.85
VPS36-202ENST00000462289 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
VPS36-202ENST00000462289 XAGE1AQ9HD64 81 aa3.5□□□□□ -1.85
VPS36-202ENST00000462289 GAGE2DQ9UEU5 116 aa3.5□□□□□ -1.85
VPS36-202ENST00000462289 PSORS1C2Q9UIG4 136 aa3.5□□□□□ -1.85
VPS36-202ENST00000462289 HERC1Q15751 4861 aa3.49□□□□□ -1.85
VPS36-202ENST00000462289 MYMXA0A1B0GTQ4 84 aa3.49□□□□□ -1.85
VPS36-202ENST00000462289 LINC00587B1AMM8 73 aa3.49□□□□□ -1.85
VPS36-202ENST00000462289 H0Y8G0 127 aa3.49□□□□□ -1.85
VPS36-202ENST00000462289 M0QXV9 152 aa3.49□□□□□ -1.85
VPS36-202ENST00000462289 HERVK_113P61574 105 aa3.49□□□□□ -1.85
VPS36-202ENST00000462289 SNRPEP62304 92 aaKnown RBP3.49□□□□□ -1.85
VPS36-202ENST00000462289 PHF5AQ7RTV0 110 aaKnown RBP3.49□□□□□ -1.85
VPS36-202ENST00000462289 C7orf33Q8WU49 177 aa3.49□□□□□ -1.85
VPS36-202ENST00000462289 C22orf24Q9Y442 160 aa3.49□□□□□ -1.85
VPS36-202ENST00000462289 A0A0J9YXY3 114 aa3.48□□□□□ -1.85
VPS36-202ENST00000462289 KRTAP4-16G5E9R7 235 aaPredicted RBP3.48□□□□□ -1.85
VPS36-202ENST00000462289 MT1HL1P0DM35 61 aa3.48□□□□□ -1.85
VPS36-202ENST00000462289 INAFM2P0DMQ5 153 aa3.48□□□□□ -1.85
VPS36-202ENST00000462289 SPRR1AP35321 89 aa3.48□□□□□ -1.85
VPS36-202ENST00000462289 KRTDAPP60985 99 aa3.48□□□□□ -1.85
VPS36-202ENST00000462289 ADAMTSL4-AS1Q5T5F5 129 aa3.48□□□□□ -1.85
VPS36-202ENST00000462289 SOSTDC1Q6X4U4 206 aa3.48□□□□□ -1.85
VPS36-202ENST00000462289 FAM19A5Q7Z5A7 132 aaPredicted RBP3.48□□□□□ -1.85
VPS36-202ENST00000462289 MRPL55Q7Z7F7 128 aaKnown RBP3.48□□□□□ -1.85
VPS36-202ENST00000462289 MIR7-3HGQ8N6C7 128 aa3.48□□□□□ -1.85
VPS36-202ENST00000462289 IGLV1-50A0A075B6I6 118 aa3.47□□□□□ -1.85
VPS36-202ENST00000462289 TRBV10-2A0A0K0K1G8 114 aa3.47□□□□□ -1.85
VPS36-202ENST00000462289 C20orf202A1L168 122 aa3.47□□□□□ -1.85
VPS36-202ENST00000462289 NDUFC2O95298 119 aa3.47□□□□□ -1.85
VPS36-202ENST00000462289 OXTP01178 125 aa3.47□□□□□ -1.85
VPS36-202ENST00000462289 IGLV7-43P04211 117 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms