RNA–Protein interactions for RNA: ENST00000435981.5

LINC01393-202, Transcript of long intergenic non-protein coding RNA 1393, humanhuman

TSL 1 (best) BASIC

Gene LINC01393, Length 1,187 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01393-202ENST00000435981 IGKV2-24A0A0C4DH68 120 aa4.54□□□□□ -1.68
LINC01393-202ENST00000435981 CIRBPQ14011 172 aaKnown RBP4.54□□□□□ -1.68
LINC01393-202ENST00000435981 KIAA0087Q14695 138 aa4.54□□□□□ -1.68
LINC01393-202ENST00000435981 LINC01620Q4KN68 170 aa4.54□□□□□ -1.68
LINC01393-202ENST00000435981 E9PLD3 99 aa4.53□□□□□ -1.68
LINC01393-202ENST00000435981 NDUFC2-KCTD14E9PQ53 114 aa4.53□□□□□ -1.68
LINC01393-202ENST00000435981 PFN2P35080 140 aa4.53□□□□□ -1.68
LINC01393-202ENST00000435981 LINC00158P58513 81 aa4.53□□□□□ -1.68
LINC01393-202ENST00000435981 MAJINQ3KP22 176 aa4.53□□□□□ -1.68
LINC01393-202ENST00000435981 GAGE2EQ4V326 116 aa4.53□□□□□ -1.68
LINC01393-202ENST00000435981 STPG4Q8N801 248 aa4.53□□□□□ -1.68
LINC01393-202ENST00000435981 ZNF625Q96I27 306 aaPredicted RBP4.53□□□□□ -1.68
LINC01393-202ENST00000435981 C6orf48Q9UBA6 75 aa4.53□□□□□ -1.68
LINC01393-202ENST00000435981 GAGE2DQ9UEU5 116 aa4.53□□□□□ -1.68
LINC01393-202ENST00000435981 ERG28Q9UKR5 140 aa4.53□□□□□ -1.68
LINC01393-202ENST00000435981 ZNF815PA8K554 130 aa4.52□□□□□ -1.69
LINC01393-202ENST00000435981 COX17Q14061 63 aa4.52□□□□□ -1.69
LINC01393-202ENST00000435981 SCGB1D4Q6XE38 83 aa4.52□□□□□ -1.69
LINC01393-202ENST00000435981 MIEN1Q9BRT3 115 aa4.52□□□□□ -1.69
LINC01393-202ENST00000435981 VAMP8Q9BV40 100 aa4.52□□□□□ -1.69
LINC01393-202ENST00000435981 FRAS1Q86XX4 4008 aa4.52□□□□□ -1.69
LINC01393-202ENST00000435981 RYR3Q15413 4870 aa4.51□□□□□ -1.69
LINC01393-202ENST00000435981 KRTAP10-1P60331 282 aa4.51□□□□□ -1.69
LINC01393-202ENST00000435981 S100A12P80511 92 aa4.51□□□□□ -1.69
LINC01393-202ENST00000435981 C9orf116Q5BN46 136 aaPredicted RBP4.51□□□□□ -1.69
LINC01393-202ENST00000435981 SDIM1Q6ZPB5 146 aa4.51□□□□□ -1.69
LINC01393-202ENST00000435981 A0A096LNI7 61 aa4.5□□□□□ -1.69
LINC01393-202ENST00000435981 A0A0U1RRA0 63 aa4.5□□□□□ -1.69
LINC01393-202ENST00000435981 TLX1NBP0CAT3 122 aa4.5□□□□□ -1.69
LINC01393-202ENST00000435981 KRTAP10-12P60413 245 aa4.5□□□□□ -1.69
LINC01393-202ENST00000435981 JOSD1Q15040 202 aaPredicted RBP4.5□□□□□ -1.69
LINC01393-202ENST00000435981 COPS9Q8WXC6 57 aa4.5□□□□□ -1.69
LINC01393-202ENST00000435981 TMEM238C9JI98 176 aa4.49□□□□□ -1.69
LINC01393-202ENST00000435981 CHTF8P0CG12 524 aa4.49□□□□□ -1.69
LINC01393-202ENST00000435981 SMIM13P0DJ93 91 aa4.49□□□□□ -1.69
LINC01393-202ENST00000435981 TSPEAR-AS2P59090 65 aa4.49□□□□□ -1.69
LINC01393-202ENST00000435981 Q6ZRP5 223 aa4.49□□□□□ -1.69
LINC01393-202ENST00000435981 NKAPP1Q8N9T2 125 aa4.49□□□□□ -1.69
LINC01393-202ENST00000435981 C7orf33Q8WU49 177 aa4.49□□□□□ -1.69
LINC01393-202ENST00000435981 PAM16Q9Y3D7 125 aa4.49□□□□□ -1.69
LINC01393-202ENST00000435981 DNAH17Q9UFH2 4485 aa4.48□□□□□ -1.69
LINC01393-202ENST00000435981 CDK2AP2O75956 126 aa4.48□□□□□ -1.69
LINC01393-202ENST00000435981 RPL24P83731 157 aaKnown RBP4.48□□□□□ -1.69
LINC01393-202ENST00000435981 SPATA45Q537H7 98 aa4.48□□□□□ -1.69
LINC01393-202ENST00000435981 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
LINC01393-202ENST00000435981 FAM19A5Q7Z5A7 132 aaPredicted RBP4.48□□□□□ -1.69
LINC01393-202ENST00000435981 SPACA4Q8TDM5 124 aa4.48□□□□□ -1.69
LINC01393-202ENST00000435981 XAGE1AQ9HD64 81 aa4.48□□□□□ -1.69
LINC01393-202ENST00000435981 DNAH10Q8IVF4 4471 aa4.48□□□□□ -1.69
LINC01393-202ENST00000435981 IGKV2D-26A0A0A0MRZ7 120 aa4.47□□□□□ -1.69
LINC01393-202ENST00000435981 A0A0J9YXY3 114 aa4.47□□□□□ -1.69
LINC01393-202ENST00000435981 UBE2BP63146 152 aa4.47□□□□□ -1.69
LINC01393-202ENST00000435981 SRSF9Q13242 221 aaKnown RBP eCLIP4.47□□□□□ -1.69
LINC01393-202ENST00000435981 LBHQ53QV2 105 aaPredicted RBP4.47□□□□□ -1.69
LINC01393-202ENST00000435981 Q6ZSA8 131 aa4.47□□□□□ -1.69
LINC01393-202ENST00000435981 SCXQ7RTU7 201 aa4.47□□□□□ -1.69
LINC01393-202ENST00000435981 MIR7-3HGQ8N6C7 128 aa4.47□□□□□ -1.69
LINC01393-202ENST00000435981 M0QXV9 152 aa4.46□□□□□ -1.7
LINC01393-202ENST00000435981 TIMM17BO60830 172 aa4.46□□□□□ -1.7
LINC01393-202ENST00000435981 PCP2Q8IVA1 136 aa4.46□□□□□ -1.7
LINC01393-202ENST00000435981 SND1-IT1Q9HBX3 110 aa4.46□□□□□ -1.7
LINC01393-202ENST00000435981 HECTD4Q9Y4D8 3996 aa4.45□□□□□ -1.7
LINC01393-202ENST00000435981 COX8AP10176 69 aa4.45□□□□□ -1.7
LINC01393-202ENST00000435981 NPC2P61916 151 aa4.45□□□□□ -1.7
LINC01393-202ENST00000435981 HAMPP81172 84 aa4.45□□□□□ -1.7
LINC01393-202ENST00000435981 PYY3Q5JQD4 70 aa4.45□□□□□ -1.7
LINC01393-202ENST00000435981 SLC25A34Q6PIV7 304 aa4.45□□□□□ -1.7
LINC01393-202ENST00000435981 Q6ZVH6 145 aa4.45□□□□□ -1.7
LINC01393-202ENST00000435981 BOD1L2Q8IYS8 172 aa4.45□□□□□ -1.7
LINC01393-202ENST00000435981 DAND5Q8N907 189 aa4.45□□□□□ -1.7
LINC01393-202ENST00000435981 CIRBP-AS1Q8TBR5 109 aa4.45□□□□□ -1.7
LINC01393-202ENST00000435981 TTTY13Q9BZ97 58 aa4.45□□□□□ -1.7
LINC01393-202ENST00000435981 PLAC8Q9NZF1 115 aa4.45□□□□□ -1.7
LINC01393-202ENST00000435981 DNAH2Q9P225 4427 aa4.45□□□□□ -1.7
LINC01393-202ENST00000435981 SMIM6P0DI80 62 aa4.44□□□□□ -1.7
LINC01393-202ENST00000435981 IFITM1P13164 125 aa4.44□□□□□ -1.7
LINC01393-202ENST00000435981 C9orf129Q5T035 196 aaKnown RBP4.44□□□□□ -1.7
LINC01393-202ENST00000435981 C14orf144Q96I85 54 aa4.44□□□□□ -1.7
LINC01393-202ENST00000435981 HIST1H4GQ99525 98 aa4.44□□□□□ -1.7
LINC01393-202ENST00000435981 FAM168BA1KXE4 195 aa4.43□□□□□ -1.7
LINC01393-202ENST00000435981 PANO1I0J062 215 aa4.43□□□□□ -1.7
LINC01393-202ENST00000435981 DLEU1O43261 78 aa4.43□□□□□ -1.7
LINC01393-202ENST00000435981 SMR3BP02814 79 aaPredicted RBP4.43□□□□□ -1.7
LINC01393-202ENST00000435981 S100A7L2Q5SY68 101 aa4.43□□□□□ -1.7
LINC01393-202ENST00000435981 MRPL55Q7Z7F7 128 aaKnown RBP4.43□□□□□ -1.7
LINC01393-202ENST00000435981 TP73-AS1Q9UF72 201 aa4.43□□□□□ -1.7
LINC01393-202ENST00000435981 CBY1Q9Y3M2 126 aa4.43□□□□□ -1.7
LINC01393-202ENST00000435981 A0A1W2PNN7 141 aa4.42□□□□□ -1.7
LINC01393-202ENST00000435981 GAGE10A6NGK3 116 aa4.42□□□□□ -1.7
LINC01393-202ENST00000435981 M0R378 163 aa4.42□□□□□ -1.7
LINC01393-202ENST00000435981 NCR3O14931 201 aa4.42□□□□□ -1.7
LINC01393-202ENST00000435981 XGP55808 180 aa4.42□□□□□ -1.7
LINC01393-202ENST00000435981 RPL37AP61513 92 aaKnown RBP4.42□□□□□ -1.7
LINC01393-202ENST00000435981 PHF5AQ7RTV0 110 aaKnown RBP4.42□□□□□ -1.7
LINC01393-202ENST00000435981 LINC00518Q8N0U6 118 aa4.42□□□□□ -1.7
LINC01393-202ENST00000435981 LINC00308Q8TCZ7 52 aa4.42□□□□□ -1.7
LINC01393-202ENST00000435981 SPANXDQ9BXN6 97 aa4.42□□□□□ -1.7
LINC01393-202ENST00000435981 SPANXB1Q9NS25 103 aaPredicted RBP4.42□□□□□ -1.7
LINC01393-202ENST00000435981 SPANXCQ9NY87 97 aa4.42□□□□□ -1.7
LINC01393-202ENST00000435981 UQCR10Q9UDW1 63 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms