RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 S100A6P06703 90 aa4.67□□□□□ -1.66
LINC01049-201ENST00000426840 KRTDAPP60985 99 aa4.67□□□□□ -1.66
LINC01049-201ENST00000426840 STPG4Q8N801 248 aa4.67□□□□□ -1.66
LINC01049-201ENST00000426840 ZNF625Q96I27 306 aaPredicted RBP4.67□□□□□ -1.66
LINC01049-201ENST00000426840 LINC00474Q9P2X8 69 aa4.67□□□□□ -1.66
LINC01049-201ENST00000426840 LEPROTO15243 131 aa4.66□□□□□ -1.66
LINC01049-201ENST00000426840 RPL18AQ02543 176 aaKnown RBP4.66□□□□□ -1.66
LINC01049-201ENST00000426840 S100A2P29034 98 aa4.65□□□□□ -1.67
LINC01049-201ENST00000426840 TSPEAR-AS2P59090 65 aa4.65□□□□□ -1.67
LINC01049-201ENST00000426840 GAGE2EQ4V326 116 aa4.65□□□□□ -1.67
LINC01049-201ENST00000426840 C9orf129Q5T035 196 aaKnown RBP4.65□□□□□ -1.67
LINC01049-201ENST00000426840 KRTAP7-1Q8IUC3 87 aa4.65□□□□□ -1.67
LINC01049-201ENST00000426840 GAGE2DQ9UEU5 116 aa4.65□□□□□ -1.67
LINC01049-201ENST00000426840 FAM168BA1KXE4 195 aa4.64□□□□□ -1.67
LINC01049-201ENST00000426840 E9PLD3 99 aa4.64□□□□□ -1.67
LINC01049-201ENST00000426840 PLEKHB2Q96CS7 222 aa4.64□□□□□ -1.67
LINC01049-201ENST00000426840 J3QQQ9 107 aa4.63□□□□□ -1.67
LINC01049-201ENST00000426840 PRYO14603 147 aa4.63□□□□□ -1.67
LINC01049-201ENST00000426840 PFN2P35080 140 aa4.63□□□□□ -1.67
LINC01049-201ENST00000426840 KRTAP10-4P60372 401 aaPredicted RBP4.63□□□□□ -1.67
LINC01049-201ENST00000426840 HERVK_113P61574 105 aa4.63□□□□□ -1.67
LINC01049-201ENST00000426840 SFTA2Q6UW10 78 aa4.63□□□□□ -1.67
LINC01049-201ENST00000426840 XAGE1AQ9HD64 81 aa4.63□□□□□ -1.67
LINC01049-201ENST00000426840 NDUFA12Q9UI09 145 aa4.63□□□□□ -1.67
LINC01049-201ENST00000426840 ERG28Q9UKR5 140 aa4.63□□□□□ -1.67
LINC01049-201ENST00000426840 ABCA13Q86UQ4 5058 aa4.63□□□□□ -1.67
LINC01049-201ENST00000426840 IGKV2D-26A0A0A0MRZ7 120 aa4.62□□□□□ -1.67
LINC01049-201ENST00000426840 MYMXA0A1B0GTQ4 84 aa4.62□□□□□ -1.67
LINC01049-201ENST00000426840 C20orf202A1L168 122 aa4.62□□□□□ -1.67
LINC01049-201ENST00000426840 HERV-K104P63124 156 aa4.62□□□□□ -1.67
LINC01049-201ENST00000426840 COX17Q14061 63 aa4.62□□□□□ -1.67
LINC01049-201ENST00000426840 Q5VSD8 79 aa4.62□□□□□ -1.67
LINC01049-201ENST00000426840 VPS13BQ7Z7G8 4022 aa4.61□□□□□ -1.67
LINC01049-201ENST00000426840 SMIM13P0DJ93 91 aa4.61□□□□□ -1.67
LINC01049-201ENST00000426840 LGALS3P17931 250 aaKnown RBP4.61□□□□□ -1.67
LINC01049-201ENST00000426840 LINC00158P58513 81 aa4.61□□□□□ -1.67
LINC01049-201ENST00000426840 SERTAD4-AS1Q5TG53 156 aa4.61□□□□□ -1.67
LINC01049-201ENST00000426840 PHF5AQ7RTV0 110 aaKnown RBP4.61□□□□□ -1.67
LINC01049-201ENST00000426840 KRTAP11-1Q8IUC1 163 aa4.61□□□□□ -1.67
LINC01049-201ENST00000426840 ATOH7Q8N100 152 aa4.61□□□□□ -1.67
LINC01049-201ENST00000426840 SND1-IT1Q9HBX3 110 aa4.61□□□□□ -1.67
LINC01049-201ENST00000426840 A0A0U1RRA0 63 aa4.6□□□□□ -1.67
LINC01049-201ENST00000426840 NMUP48645 174 aa4.6□□□□□ -1.67
LINC01049-201ENST00000426840 AKR1D1P51857 326 aa4.6□□□□□ -1.67
LINC01049-201ENST00000426840 FAM19A5Q7Z5A7 132 aaPredicted RBP4.6□□□□□ -1.67
LINC01049-201ENST00000426840 TTTY13Q9BZ97 58 aa4.6□□□□□ -1.67
LINC01049-201ENST00000426840 C22orf24Q9Y442 160 aa4.6□□□□□ -1.67
LINC01049-201ENST00000426840 IGLV5-37A0A075B6J1 123 aa4.59□□□□□ -1.67
LINC01049-201ENST00000426840 A0A0J9YXY3 114 aa4.59□□□□□ -1.67
LINC01049-201ENST00000426840 LINC00587B1AMM8 73 aa4.59□□□□□ -1.67
LINC01049-201ENST00000426840 PCP4P48539 62 aa4.59□□□□□ -1.67
LINC01049-201ENST00000426840 RPL37AP61513 92 aaKnown RBP4.59□□□□□ -1.67
LINC01049-201ENST00000426840 MEIG1Q5JSS6 88 aa4.59□□□□□ -1.67
LINC01049-201ENST00000426840 KRTAP5-3Q6L8H2 238 aa4.59□□□□□ -1.67
LINC01049-201ENST00000426840 MIR7-3HGQ8N6C7 128 aa4.59□□□□□ -1.67
LINC01049-201ENST00000426840 Q8NDZ9 215 aa4.59□□□□□ -1.67
LINC01049-201ENST00000426840 C7orf33Q8WU49 177 aa4.59□□□□□ -1.67
LINC01049-201ENST00000426840 LOC107984156A0A0G2JMH3 177 aa4.58□□□□□ -1.68
LINC01049-201ENST00000426840 M0QXV9 152 aa4.58□□□□□ -1.68
LINC01049-201ENST00000426840 SCGB1D1O95968 90 aa4.58□□□□□ -1.68
LINC01049-201ENST00000426840 VPREB1P12018 145 aa4.58□□□□□ -1.68
LINC01049-201ENST00000426840 ADAMTSL4-AS1Q5T5F5 129 aa4.58□□□□□ -1.68
LINC01049-201ENST00000426840 ARL17AQ8IVW1 177 aa4.58□□□□□ -1.68
LINC01049-201ENST00000426840 TP73-AS1Q9UF72 201 aa4.58□□□□□ -1.68
LINC01049-201ENST00000426840 ZNF815PA8K554 130 aa4.57□□□□□ -1.68
LINC01049-201ENST00000426840 INAFM2P0DMQ5 153 aa4.57□□□□□ -1.68
LINC01049-201ENST00000426840 HNRNPA3P51991 378 aaKnown RBP4.57□□□□□ -1.68
LINC01049-201ENST00000426840 PCP2Q8IVA1 136 aa4.57□□□□□ -1.68
LINC01049-201ENST00000426840 DAND5Q8N907 189 aa4.57□□□□□ -1.68
LINC01049-201ENST00000426840 LINC00167Q96N53 147 aa4.57□□□□□ -1.68
LINC01049-201ENST00000426840 LITAFQ99732 161 aa4.57□□□□□ -1.68
LINC01049-201ENST00000426840 PSORS1C2Q9UIG4 136 aa4.57□□□□□ -1.68
LINC01049-201ENST00000426840 GAGE10A6NGK3 116 aa4.56□□□□□ -1.68
LINC01049-201ENST00000426840 TIMM17BO60830 172 aa4.56□□□□□ -1.68
LINC01049-201ENST00000426840 PRR3P79522 188 aaKnown RBP4.56□□□□□ -1.68
LINC01049-201ENST00000426840 RPL24P83731 157 aaKnown RBP4.56□□□□□ -1.68
LINC01049-201ENST00000426840 SRSF9Q13242 221 aaKnown RBP eCLIP4.56□□□□□ -1.68
LINC01049-201ENST00000426840 JOSD1Q15040 202 aaPredicted RBP4.56□□□□□ -1.68
LINC01049-201ENST00000426840 LBHQ53QV2 105 aaPredicted RBP4.56□□□□□ -1.68
LINC01049-201ENST00000426840 MRPL55Q7Z7F7 128 aaKnown RBP4.56□□□□□ -1.68
LINC01049-201ENST00000426840 PCLOQ9Y6V0 5065 aa4.56□□□□□ -1.68
LINC01049-201ENST00000426840 PKHD1L1Q86WI1 4243 aa4.55□□□□□ -1.68
LINC01049-201ENST00000426840 SOSTDC1Q6X4U4 206 aa4.55□□□□□ -1.68
LINC01049-201ENST00000426840 BOD1L2Q8IYS8 172 aa4.55□□□□□ -1.68
LINC01049-201ENST00000426840 IGLV1-50A0A075B6I6 118 aa4.54□□□□□ -1.68
LINC01049-201ENST00000426840 RPL37AP8A6NKH3 93 aa4.54□□□□□ -1.68
LINC01049-201ENST00000426840 HSBP1L1C9JCN9 74 aa4.54□□□□□ -1.68
LINC01049-201ENST00000426840 UBE2BP63146 152 aa4.54□□□□□ -1.68
LINC01049-201ENST00000426840 NKAPP1Q8N9T2 125 aa4.54□□□□□ -1.68
LINC01049-201ENST00000426840 FLG2Q5D862 2391 aaPredicted RBP4.54□□□□□ -1.68
LINC01049-201ENST00000426840 M0R378 163 aa4.53□□□□□ -1.68
LINC01049-201ENST00000426840 PYY3Q5JQD4 70 aa4.53□□□□□ -1.68
LINC01049-201ENST00000426840 C1orf137Q5JT78 98 aa4.53□□□□□ -1.68
LINC01049-201ENST00000426840 LINC00308Q8TCZ7 52 aa4.53□□□□□ -1.68
LINC01049-201ENST00000426840 SRRM2Q9UQ35 2752 aaKnown RBP4.53□□□□□ -1.68
LINC01049-201ENST00000426840 NDUFC2O95298 119 aa4.52□□□□□ -1.69
LINC01049-201ENST00000426840 IGLV7-43P04211 117 aa4.52□□□□□ -1.69
LINC01049-201ENST00000426840 NPC2P61916 151 aa4.52□□□□□ -1.69
LINC01049-201ENST00000426840 SPANXDQ9BXN6 97 aa4.52□□□□□ -1.69
LINC01049-201ENST00000426840 SPANXCQ9NY87 97 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms