RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 LINC00587B1AMM8 73 aa8.71□□□□□ -1.02
SEC13-205ENST00000397101 CNBPP62633 177 aaKnown RBP8.71□□□□□ -1.02
SEC13-205ENST00000397101 C9orf116Q5BN46 136 aaPredicted RBP8.71□□□□□ -1.02
SEC13-205ENST00000397101 SLC25A34Q6PIV7 304 aa8.71□□□□□ -1.02
SEC13-205ENST00000397101 ERG28Q9UKR5 140 aa8.71□□□□□ -1.02
SEC13-205ENST00000397101 A0A0J9YXY3 114 aa8.7□□□□□ -1.02
SEC13-205ENST00000397101 RNF151Q2KHN1 245 aa8.7□□□□□ -1.02
SEC13-205ENST00000397101 LINC00518Q8N0U6 118 aa8.7□□□□□ -1.02
SEC13-205ENST00000397101 PRO1933Q9H354 126 aa8.7□□□□□ -1.02
SEC13-205ENST00000397101 SMIM13P0DJ93 91 aa8.69□□□□□ -1.02
SEC13-205ENST00000397101 RPL18AQ02543 176 aaKnown RBP8.69□□□□□ -1.02
SEC13-205ENST00000397101 BOD1L2Q8IYS8 172 aa8.69□□□□□ -1.02
SEC13-205ENST00000397101 LOC107984640A0A0U1RRK4 108 aa8.68□□□□□ -1.02
SEC13-205ENST00000397101 PKIGQ9Y2B9 76 aa8.68□□□□□ -1.02
SEC13-205ENST00000397101 DLEU1O43261 78 aa8.67□□□□□ -1.02
SEC13-205ENST00000397101 GAGE2BQ13066 116 aa8.67□□□□□ -1.02
SEC13-205ENST00000397101 GAGE2EQ4V326 116 aa8.67□□□□□ -1.02
SEC13-205ENST00000397101 C9orf163Q8N9P6 203 aa8.67□□□□□ -1.02
SEC13-205ENST00000397101 UQCR10Q9UDW1 63 aa8.67□□□□□ -1.02
SEC13-205ENST00000397101 GAGE2DQ9UEU5 116 aa8.67□□□□□ -1.02
SEC13-205ENST00000397101 TP73-AS1Q9UF72 201 aa8.67□□□□□ -1.02
SEC13-205ENST00000397101 TMEM238C9JI98 176 aa8.66□□□□□ -1.02
SEC13-205ENST00000397101 TSTD3H0UI37 97 aa8.66□□□□□ -1.02
SEC13-205ENST00000397101 COX17Q14061 63 aa8.66□□□□□ -1.02
SEC13-205ENST00000397101 NDUFC2-KCTD14E9PQ53 114 aa8.65□□□□□ -1.02
SEC13-205ENST00000397101 SRSF9Q13242 221 aaKnown RBP eCLIP8.65□□□□□ -1.02
SEC13-205ENST00000397101 DPH3Q96FX2 82 aa8.65□□□□□ -1.02
SEC13-205ENST00000397101 IGKV2-24A0A0C4DH68 120 aa8.64□□□□□ -1.03
SEC13-205ENST00000397101 TIMM17BO60830 172 aa8.64□□□□□ -1.03
SEC13-205ENST00000397101 NPC2P61916 151 aa8.64□□□□□ -1.03
SEC13-205ENST00000397101 MIR7-3HGQ8N6C7 128 aa8.64□□□□□ -1.03
SEC13-205ENST00000397101 DAND5Q8N907 189 aa8.64□□□□□ -1.03
SEC13-205ENST00000397101 MIEN1Q9BRT3 115 aa8.63□□□□□ -1.03
SEC13-205ENST00000397101 TLX1NBP0CAT3 122 aa8.62□□□□□ -1.03
SEC13-205ENST00000397101 Q6ZRP5 223 aa8.62□□□□□ -1.03
SEC13-205ENST00000397101 HIST1H4GQ99525 98 aa8.62□□□□□ -1.03
SEC13-205ENST00000397101 XAGE1AQ9HD64 81 aa8.62□□□□□ -1.03
SEC13-205ENST00000397101 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.62□□□□□ -1.03
SEC13-205ENST00000397101 ADAMTSL4-AS1Q5T5F5 129 aa8.61□□□□□ -1.03
SEC13-205ENST00000397101 SDIM1Q6ZPB5 146 aa8.61□□□□□ -1.03
SEC13-205ENST00000397101 A0A096LNI7 61 aa8.6□□□□□ -1.03
SEC13-205ENST00000397101 PTTG1IPP53801 180 aa8.6□□□□□ -1.03
SEC13-205ENST00000397101 COPS9Q8WXC6 57 aa8.6□□□□□ -1.03
SEC13-205ENST00000397101 SPANXDQ9BXN6 97 aa8.6□□□□□ -1.03
SEC13-205ENST00000397101 SND1-IT1Q9HBX3 110 aa8.6□□□□□ -1.03
SEC13-205ENST00000397101 SPANXCQ9NY87 97 aa8.6□□□□□ -1.03
SEC13-205ENST00000397101 HIGD1BQ9P298 99 aa8.6□□□□□ -1.03
SEC13-205ENST00000397101 PANO1I0J062 215 aa8.59□□□□□ -1.03
SEC13-205ENST00000397101 C2orf91Q6ZV80 131 aa8.59□□□□□ -1.03
SEC13-205ENST00000397101 Q6ZVH6 145 aa8.59□□□□□ -1.03
SEC13-205ENST00000397101 LINC01600Q96MT4 127 aa8.59□□□□□ -1.03
SEC13-205ENST00000397101 LITAFQ99732 161 aa8.59□□□□□ -1.03
SEC13-205ENST00000397101 SPANXB1Q9NS25 103 aaPredicted RBP8.59□□□□□ -1.03
SEC13-205ENST00000397101 LINC00474Q9P2X8 69 aa8.59□□□□□ -1.03
SEC13-205ENST00000397101 CHTF8P0CG12 524 aa8.58□□□□□ -1.04
SEC13-205ENST00000397101 MUSTN1Q8IVN3 82 aa8.58□□□□□ -1.04
SEC13-205ENST00000397101 IFITM1P13164 125 aa8.57□□□□□ -1.04
SEC13-205ENST00000397101 LINC00308Q8TCZ7 52 aa8.57□□□□□ -1.04
SEC13-205ENST00000397101 LPAP08519 4548 aa8.57□□□□□ -1.04
SEC13-205ENST00000397101 C9orf129Q5T035 196 aaKnown RBP8.56□□□□□ -1.04
SEC13-205ENST00000397101 RPL24P83731 157 aaKnown RBP8.55□□□□□ -1.04
SEC13-205ENST00000397101 HSD52Q0P140 79 aa8.55□□□□□ -1.04
SEC13-205ENST00000397101 TAL2Q16559 108 aa8.55□□□□□ -1.04
SEC13-205ENST00000397101 FAM19A5Q7Z5A7 132 aaPredicted RBP8.55□□□□□ -1.04
SEC13-205ENST00000397101 PCP4L1A6NKN8 68 aa8.54□□□□□ -1.04
SEC13-205ENST00000397101 CTAG1AP78358 180 aa8.54□□□□□ -1.04
SEC13-205ENST00000397101 SOSTDC1Q6X4U4 206 aa8.54□□□□□ -1.04
SEC13-205ENST00000397101 NKAPP1Q8N9T2 125 aa8.54□□□□□ -1.04
SEC13-205ENST00000397101 DDTP30046 118 aa8.53□□□□□ -1.04
SEC13-205ENST00000397101 CEND1Q8N111 149 aa8.53□□□□□ -1.04
SEC13-205ENST00000397101 A0A087WYN8 130 aa8.52□□□□□ -1.05
SEC13-205ENST00000397101 FAM168BA1KXE4 195 aa8.52□□□□□ -1.05
SEC13-205ENST00000397101 NCR3O14931 201 aa8.52□□□□□ -1.05
SEC13-205ENST00000397101 SPACA4Q8TDM5 124 aa8.52□□□□□ -1.05
SEC13-205ENST00000397101 PLAC8Q9NZF1 115 aa8.52□□□□□ -1.05
SEC13-205ENST00000397101 EIF4EBP3O60516 100 aaPredicted RBP8.51□□□□□ -1.05
SEC13-205ENST00000397101 C7orf33Q8WU49 177 aa8.51□□□□□ -1.05
SEC13-205ENST00000397101 LOC107984156A0A0G2JMH3 177 aa8.5□□□□□ -1.05
SEC13-205ENST00000397101 TMEM238LA0A1B0GVL6 79 aa8.5□□□□□ -1.05
SEC13-205ENST00000397101 A0A1W2PNN7 141 aa8.5□□□□□ -1.05
SEC13-205ENST00000397101 A4D1N5 150 aa8.5□□□□□ -1.05
SEC13-205ENST00000397101 A6NJY4 79 aa8.5□□□□□ -1.05
SEC13-205ENST00000397101 KRTAP10-8P60410 259 aa8.5□□□□□ -1.05
SEC13-205ENST00000397101 ARL17AQ8IVW1 177 aa8.5□□□□□ -1.05
SEC13-205ENST00000397101 M0R143 59 aa8.49□□□□□ -1.05
SEC13-205ENST00000397101 NDUFC2O95298 119 aa8.49□□□□□ -1.05
SEC13-205ENST00000397101 HINT1P49773 126 aaPredicted RBP8.49□□□□□ -1.05
SEC13-205ENST00000397101 PRR3P79522 188 aaKnown RBP8.49□□□□□ -1.05
SEC13-205ENST00000397101 OR13C6PQ8NH95 151 aa8.49□□□□□ -1.05
SEC13-205ENST00000397101 C22orf24Q9Y442 160 aa8.49□□□□□ -1.05
SEC13-205ENST00000397101 GAGE10A6NGK3 116 aa8.48□□□□□ -1.05
SEC13-205ENST00000397101 M0QXV9 152 aa8.48□□□□□ -1.05
SEC13-205ENST00000397101 VPREB1P12018 145 aa8.48□□□□□ -1.05
SEC13-205ENST00000397101 BATFQ16520 125 aa8.48□□□□□ -1.05
SEC13-205ENST00000397101 S100A7L2Q5SY68 101 aa8.48□□□□□ -1.05
SEC13-205ENST00000397101 A6NDN8 102 aa8.47□□□□□ -1.05
SEC13-205ENST00000397101 M0R378 163 aa8.47□□□□□ -1.05
SEC13-205ENST00000397101 LBHQ53QV2 105 aaPredicted RBP8.47□□□□□ -1.05
SEC13-205ENST00000397101 RAB37Q96AX2 223 aa8.47□□□□□ -1.05
SEC13-205ENST00000397101 PPDPFQ9H3Y8 114 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms