RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 INAFM2P0DMQ5 153 aa12.45□□□□□ -0.42
SIL1-202ENST00000394817 HUWE1Q7Z6Z7 4374 aaKnown RBP12.45□□□□□ -0.42
SIL1-202ENST00000394817 NCR3O14931 201 aa12.45□□□□□ -0.42
SIL1-202ENST00000394817 ACYP1P07311 99 aa12.45□□□□□ -0.42
SIL1-202ENST00000394817 LINC01556Q5JQF7 62 aa12.45□□□□□ -0.42
SIL1-202ENST00000394817 C6orf48Q9UBA6 75 aa12.45□□□□□ -0.42
SIL1-202ENST00000394817 A0A1B0GX51 115 aa12.44□□□□□ -0.42
SIL1-202ENST00000394817 C15orf53Q8NAA6 179 aa12.44□□□□□ -0.42
SIL1-202ENST00000394817 LINC00167Q96N53 147 aa12.43□□□□□ -0.42
SIL1-202ENST00000394817 TM2D3Q9BRN9 247 aa12.41□□□□□ -0.42
SIL1-202ENST00000394817 ZNF561-AS1K7EIQ3 104 aa12.41□□□□□ -0.42
SIL1-202ENST00000394817 S100A7L2Q5SY68 101 aa12.41□□□□□ -0.42
SIL1-202ENST00000394817 C15orf56Q8N910 161 aa12.4□□□□□ -0.42
SIL1-202ENST00000394817 OBSCN-AS1Q96MR7 158 aa12.4□□□□□ -0.42
SIL1-202ENST00000394817 ORMDL1Q9P0S3 153 aa12.4□□□□□ -0.42
SIL1-202ENST00000394817 HIGD2BQ4VC39 106 aa12.39□□□□□ -0.43
SIL1-202ENST00000394817 Q6Q795 121 aa12.39□□□□□ -0.43
SIL1-202ENST00000394817 C1orf43Q9BWL3 253 aa12.39□□□□□ -0.43
SIL1-202ENST00000394817 IGLV6-57P01721 117 aa12.38□□□□□ -0.43
SIL1-202ENST00000394817 C6orf99Q4VX62 202 aa12.38□□□□□ -0.43
SIL1-202ENST00000394817 TTC32Q5I0X7 151 aa12.38□□□□□ -0.43
SIL1-202ENST00000394817 Q8N814 137 aa12.38□□□□□ -0.43
SIL1-202ENST00000394817 CAMK2N2Q96S95 79 aa12.38□□□□□ -0.43
SIL1-202ENST00000394817 A0A1B0GV72 72 aa12.37□□□□□ -0.43
SIL1-202ENST00000394817 SLPIP03973 132 aa12.37□□□□□ -0.43
SIL1-202ENST00000394817 GAGE2BQ13066 116 aa12.37□□□□□ -0.43
SIL1-202ENST00000394817 GAGE2EQ4V326 116 aa12.37□□□□□ -0.43
SIL1-202ENST00000394817 C9orf129Q5T035 196 aaKnown RBP12.37□□□□□ -0.43
SIL1-202ENST00000394817 C2orf48Q96LS8 159 aa12.37□□□□□ -0.43
SIL1-202ENST00000394817 GAGE2DQ9UEU5 116 aa12.37□□□□□ -0.43
SIL1-202ENST00000394817 TRAV10A0A0B4J240 114 aa12.37□□□□□ -0.43
SIL1-202ENST00000394817 DNAH10OSP0CZ25 163 aa12.36□□□□□ -0.43
SIL1-202ENST00000394817 RPL18AQ02543 176 aaKnown RBP12.36□□□□□ -0.43
SIL1-202ENST00000394817 SDIM1Q6ZPB5 146 aa12.35□□□□□ -0.43
SIL1-202ENST00000394817 Q6ZRU5 148 aa12.34□□□□□ -0.43
SIL1-202ENST00000394817 XAGE1AQ9HD64 81 aa12.34□□□□□ -0.43
SIL1-202ENST00000394817 IGKV2D-24A0A075B6R9 120 aa12.33□□□□□ -0.44
SIL1-202ENST00000394817 F8WDY8 70 aa12.33□□□□□ -0.44
SIL1-202ENST00000394817 GAGE2AQ6NT46 116 aa12.33□□□□□ -0.44
SIL1-202ENST00000394817 SMCR5Q8TEV8 140 aa12.33□□□□□ -0.44
SIL1-202ENST00000394817 C14orf132Q9NPU4 83 aa12.33□□□□□ -0.44
SIL1-202ENST00000394817 LINC00575Q6W349 94 aa12.32□□□□□ -0.44
SIL1-202ENST00000394817 DNAH9Q9NYC9 4486 aa12.32□□□□□ -0.44
SIL1-202ENST00000394817 COL7A1Q02388 2944 aa12.31□□□□□ -0.44
SIL1-202ENST00000394817 TRBV7-7A0A0K0K1E9 115 aa12.31□□□□□ -0.44
SIL1-202ENST00000394817 NDUFC2-KCTD14E9PQ53 114 aa12.3□□□□□ -0.44
SIL1-202ENST00000394817 TMEM256-PLSCR3K7ERE1 68 aa12.3□□□□□ -0.44
SIL1-202ENST00000394817 LINC00643Q86TS7 51 aa12.3□□□□□ -0.44
SIL1-202ENST00000394817 TRBV10-3A0A0K0K1G6 114 aa12.29□□□□□ -0.44
SIL1-202ENST00000394817 VPREB1P12018 145 aa12.29□□□□□ -0.44
SIL1-202ENST00000394817 LINC00588Q9Y4M8 146 aa12.29□□□□□ -0.44
SIL1-202ENST00000394817 TRAV23DV6A0A075B6W5 121 aa12.27□□□□□ -0.44
SIL1-202ENST00000394817 DNHD1Q96M86 4753 aa12.27□□□□□ -0.45
SIL1-202ENST00000394817 hADV29S1A0JD25 119 aa12.26□□□□□ -0.45
SIL1-202ENST00000394817 JMJD7-PLA2G4BH0Y9G9 81 aa12.26□□□□□ -0.45
SIL1-202ENST00000394817 NDUFV3P56181 108 aaKnown RBP12.25□□□□□ -0.45
SIL1-202ENST00000394817 DIRC1Q969H9 104 aa12.25□□□□□ -0.45
SIL1-202ENST00000394817 IMUPQ9GZP8 106 aa12.25□□□□□ -0.45
SIL1-202ENST00000394817 SYCNQ0VAF6 134 aa12.25□□□□□ -0.45
SIL1-202ENST00000394817 ANAPC13Q9BS18 74 aa12.25□□□□□ -0.45
SIL1-202ENST00000394817 STAB2Q8WWQ8 2551 aa12.25□□□□□ -0.45
SIL1-202ENST00000394817 DNAH1Q9P2D7 4330 aa12.24□□□□□ -0.45
SIL1-202ENST00000394817 Q6ZRP5 223 aa12.23□□□□□ -0.45
SIL1-202ENST00000394817 M0R378 163 aa12.23□□□□□ -0.45
SIL1-202ENST00000394817 ZNF73O43830 326 aaPredicted RBP12.22□□□□□ -0.45
SIL1-202ENST00000394817 TRBV7-6A0A0J9YX20 115 aa12.21□□□□□ -0.46
SIL1-202ENST00000394817 CCKP06307 115 aa12.2□□□□□ -0.46
SIL1-202ENST00000394817 NHLRC4P0CG21 123 aaPredicted RBP12.2□□□□□ -0.46
SIL1-202ENST00000394817 UPK3BQ9BT76 320 aa12.2□□□□□ -0.46
SIL1-202ENST00000394817 ELOF1P60002 83 aaKnown RBP12.19□□□□□ -0.46
SIL1-202ENST00000394817 B9D2Q9BPU9 175 aa12.19□□□□□ -0.46
SIL1-202ENST00000394817 LINC00846Q9NV44 126 aa12.19□□□□□ -0.46
SIL1-202ENST00000394817 H3BQ85 93 aa12.18□□□□□ -0.46
SIL1-202ENST00000394817 COX7BP24311 80 aa12.18□□□□□ -0.46
SIL1-202ENST00000394817 TLX1NBP0CAT3 122 aa12.17□□□□□ -0.46
SIL1-202ENST00000394817 Q6ZQY7 126 aa12.17□□□□□ -0.46
SIL1-202ENST00000394817 RMI2Q96E14 147 aa12.17□□□□□ -0.46
SIL1-202ENST00000394817 USP17L23D6RBM5 183 aa12.16□□□□□ -0.46
SIL1-202ENST00000394817 PRKDCP78527 4128 aaKnown RBP12.16□□□□□ -0.46
SIL1-202ENST00000394817 CASC10Q5T4H9 136 aa12.14□□□□□ -0.47
SIL1-202ENST00000394817 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.14□□□□□ -0.47
SIL1-202ENST00000394817 Q6JHZ5 121 aa12.13□□□□□ -0.47
SIL1-202ENST00000394817 MEGF8Q7Z7M0 2845 aa12.12□□□□□ -0.47
SIL1-202ENST00000394817 RBM3P98179 157 aaKnown RBP12.11□□□□□ -0.47
SIL1-202ENST00000394817 LINC00528Q8N1L1 170 aa12.11□□□□□ -0.47
SIL1-202ENST00000394817 LOC110117498A0A087WWA1 95 aa12.11□□□□□ -0.47
SIL1-202ENST00000394817 FAM236AA0A1B0GUQ0 79 aa12.11□□□□□ -0.47
SIL1-202ENST00000394817 FAM236BA0A1B0GV22 79 aa12.11□□□□□ -0.47
SIL1-202ENST00000394817 LAMTOR3Q9UHA4 124 aa12.11□□□□□ -0.47
SIL1-202ENST00000394817 PLA2G2DQ9UNK4 145 aa12.11□□□□□ -0.47
SIL1-202ENST00000394817 DYNC2H1Q8NCM8 4307 aaKnown RBP12.1□□□□□ -0.47
SIL1-202ENST00000394817 SERTAD4-AS1Q5TG53 156 aa12.1□□□□□ -0.47
SIL1-202ENST00000394817 NKAPP1Q8N9T2 125 aa12.1□□□□□ -0.47
SIL1-202ENST00000394817 GHRHP01286 108 aa12.09□□□□□ -0.47
SIL1-202ENST00000394817 Q6ZQT0 140 aa12.09□□□□□ -0.47
SIL1-202ENST00000394817 LYSTQ99698 3801 aa12.08□□□□□ -0.48
SIL1-202ENST00000394817 KCNQ1DNQ9H478 68 aa12.08□□□□□ -0.48
SIL1-202ENST00000394817 CSMD3Q7Z407 3707 aa12.07□□□□□ -0.48
SIL1-202ENST00000394817 C7orf33Q8WU49 177 aa12.07□□□□□ -0.48
SIL1-202ENST00000394817 IGLV5-37A0A075B6J1 123 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms