RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 VCX2Q9H322 139 aa7.81□□□□□ -1.16
VAMP4-202ENST00000367740 OSTCQ9NRP0 149 aa7.81□□□□□ -1.16
VAMP4-202ENST00000367740 V9GYV3 84 aa7.81□□□□□ -1.16
VAMP4-202ENST00000367740 IGLV9-49A0A0B4J1Y8 123 aa7.79□□□□□ -1.16
VAMP4-202ENST00000367740 NAT8BQ9UHF3 227 aa7.79□□□□□ -1.16
VAMP4-202ENST00000367740 SEC11AP67812 179 aa7.78□□□□□ -1.16
VAMP4-202ENST00000367740 SSBP3-AS1Q7Z2R9 100 aa7.78□□□□□ -1.16
VAMP4-202ENST00000367740 S100A6P06703 90 aa7.77□□□□□ -1.17
VAMP4-202ENST00000367740 CEBPGP53567 150 aa7.77□□□□□ -1.17
VAMP4-202ENST00000367740 PDZD11Q5EBL8 140 aa7.77□□□□□ -1.17
VAMP4-202ENST00000367740 CYSLTR1Q9Y271 337 aa7.77□□□□□ -1.17
VAMP4-202ENST00000367740 IGIPA6NJ69 53 aa7.76□□□□□ -1.17
VAMP4-202ENST00000367740 FAM74A3Q4VXF1 159 aa7.76□□□□□ -1.17
VAMP4-202ENST00000367740 SMCR5Q8TEV8 140 aa7.76□□□□□ -1.17
VAMP4-202ENST00000367740 SND1-IT1Q9HBX3 110 aa7.76□□□□□ -1.17
VAMP4-202ENST00000367740 NPSP0C0P6 89 aa7.75□□□□□ -1.17
VAMP4-202ENST00000367740 PFN2P35080 140 aa7.75□□□□□ -1.17
VAMP4-202ENST00000367740 RPL24P83731 157 aaKnown RBP7.75□□□□□ -1.17
VAMP4-202ENST00000367740 SMIM7Q9BQ49 75 aa7.75□□□□□ -1.17
VAMP4-202ENST00000367740 A0A1B0GW15 77 aa7.74□□□□□ -1.17
VAMP4-202ENST00000367740 PPBPP02775 128 aa7.74□□□□□ -1.17
VAMP4-202ENST00000367740 RAB14P61106 215 aa7.74□□□□□ -1.17
VAMP4-202ENST00000367740 GAGE2AQ6NT46 116 aa7.74□□□□□ -1.17
VAMP4-202ENST00000367740 AKAP14Q86UN6 197 aa7.74□□□□□ -1.17
VAMP4-202ENST00000367740 LOC389332A0A1B0GUA5 103 aa7.72□□□□□ -1.17
VAMP4-202ENST00000367740 SMIM27A0A1W2PRY6 76 aa7.72□□□□□ -1.17
VAMP4-202ENST00000367740 ATP5LO75964 103 aa7.72□□□□□ -1.17
VAMP4-202ENST00000367740 ORMDL3Q8N138 153 aa7.72□□□□□ -1.17
VAMP4-202ENST00000367740 PRELID3AQ96N28 172 aa7.72□□□□□ -1.17
VAMP4-202ENST00000367740 LOC105371267A0A1B0GV96 52 aa7.71□□□□□ -1.18
VAMP4-202ENST00000367740 F8W036 122 aa7.71□□□□□ -1.18
VAMP4-202ENST00000367740 SLC51BQ86UW2 128 aa7.71□□□□□ -1.18
VAMP4-202ENST00000367740 IGLV5-45A0A087WSX0 123 aa7.7□□□□□ -1.18
VAMP4-202ENST00000367740 A0A1B0GXF2 115 aa7.7□□□□□ -1.18
VAMP4-202ENST00000367740 PRSS47A8MTI9 375 aa7.7□□□□□ -1.18
VAMP4-202ENST00000367740 SPINK8P0C7L1 97 aa7.7□□□□□ -1.18
VAMP4-202ENST00000367740 MRPL54Q6P161 138 aaKnown RBP7.7□□□□□ -1.18
VAMP4-202ENST00000367740 TMEM136Q6ZRR5 245 aa7.7□□□□□ -1.18
VAMP4-202ENST00000367740 NEBP20929 6669 aa7.69□□□□□ -1.18
VAMP4-202ENST00000367740 IGLV6-57P01721 117 aa7.69□□□□□ -1.18
VAMP4-202ENST00000367740 TIMM17AQ99595 171 aa7.69□□□□□ -1.18
VAMP4-202ENST00000367740 PRYO14603 147 aa7.68□□□□□ -1.18
VAMP4-202ENST00000367740 SPRR1AP35321 89 aa7.68□□□□□ -1.18
VAMP4-202ENST00000367740 RPL37P61927 97 aaKnown RBP7.68□□□□□ -1.18
VAMP4-202ENST00000367740 KRTAP6-3Q3LI67 103 aa7.68□□□□□ -1.18
VAMP4-202ENST00000367740 TINCRA0A1B0GVN0 87 aa7.67□□□□□ -1.18
VAMP4-202ENST00000367740 S100A8P05109 93 aa7.67□□□□□ -1.18
VAMP4-202ENST00000367740 PAPPA-AS1Q5QFB9 102 aa7.67□□□□□ -1.18
VAMP4-202ENST00000367740 Q8N8P6 123 aa7.67□□□□□ -1.18
VAMP4-202ENST00000367740 ERG28Q9UKR5 140 aa7.67□□□□□ -1.18
VAMP4-202ENST00000367740 ERC2-IT1O76042 136 aa7.66□□□□□ -1.18
VAMP4-202ENST00000367740 ORMDL2Q53FV1 153 aa7.66□□□□□ -1.18
VAMP4-202ENST00000367740 MAP1LC3AQ9H492 121 aa7.66□□□□□ -1.18
VAMP4-202ENST00000367740 ANKRD39Q53RE8 183 aa7.65□□□□□ -1.18
VAMP4-202ENST00000367740 Q6Q795 121 aa7.65□□□□□ -1.18
VAMP4-202ENST00000367740 S100A12P80511 92 aa7.64□□□□□ -1.19
VAMP4-202ENST00000367740 C9orf153Q5TBE3 101 aa7.64□□□□□ -1.19
VAMP4-202ENST00000367740 ETDCA0A1B0GVM5 59 aa7.63□□□□□ -1.19
VAMP4-202ENST00000367740 MT2AP02795 61 aa7.63□□□□□ -1.19
VAMP4-202ENST00000367740 LINC00310P59036 64 aa7.63□□□□□ -1.19
VAMP4-202ENST00000367740 RPL23P62829 140 aaKnown RBP7.63□□□□□ -1.19
VAMP4-202ENST00000367740 COX17Q14061 63 aa7.63□□□□□ -1.19
VAMP4-202ENST00000367740 LAMTOR2Q9Y2Q5 125 aa7.63□□□□□ -1.19
VAMP4-202ENST00000367740 LIMD2Q9BT23 127 aa7.62□□□□□ -1.19
VAMP4-202ENST00000367740 KCNQ1DNQ9H478 68 aa7.62□□□□□ -1.19
VAMP4-202ENST00000367740 ZNF625Q96I27 306 aaPredicted RBP7.61□□□□□ -1.19
VAMP4-202ENST00000367740 IGLV5-39A0A0G2JS06 123 aa7.6□□□□□ -1.19
VAMP4-202ENST00000367740 K7EMI3 77 aa7.6□□□□□ -1.19
VAMP4-202ENST00000367740 SRP19P09132 144 aaKnown RBP7.6□□□□□ -1.19
VAMP4-202ENST00000367740 ADIRFQ15847 76 aa7.6□□□□□ -1.19
VAMP4-202ENST00000367740 TOMM6Q96B49 74 aa7.6□□□□□ -1.19
VAMP4-202ENST00000367740 B5MCH6 92 aa7.58□□□□□ -1.2
VAMP4-202ENST00000367740 MT1FP04733 61 aa7.58□□□□□ -1.2
VAMP4-202ENST00000367740 ADCYAP1P18509 176 aa7.58□□□□□ -1.2
VAMP4-202ENST00000367740 KRTAP19-6Q3LI70 58 aa7.58□□□□□ -1.2
VAMP4-202ENST00000367740 ERASQ7Z444 233 aa7.58□□□□□ -1.2
VAMP4-202ENST00000367740 Q9BRP9 147 aa7.58□□□□□ -1.2
VAMP4-202ENST00000367740 H3BRM9 83 aa7.56□□□□□ -1.2
VAMP4-202ENST00000367740 NCR3O14931 201 aa7.56□□□□□ -1.2
VAMP4-202ENST00000367740 BLOC1S1P78537 153 aa7.56□□□□□ -1.2
VAMP4-202ENST00000367740 HRCT1Q6UXD1 115 aa7.56□□□□□ -1.2
VAMP4-202ENST00000367740 CST9LQ9H4G1 147 aa7.56□□□□□ -1.2
VAMP4-202ENST00000367740 LINC00846Q9NV44 126 aa7.56□□□□□ -1.2
VAMP4-202ENST00000367740 ATP5L2Q7Z4Y8 100 aa7.55□□□□□ -1.2
VAMP4-202ENST00000367740 SCGB3A1Q96QR1 104 aa7.55□□□□□ -1.2
VAMP4-202ENST00000367740 TRBV10-3A0A0K0K1G6 114 aa7.54□□□□□ -1.2
VAMP4-202ENST00000367740 RGS21Q2M5E4 152 aa7.54□□□□□ -1.2
VAMP4-202ENST00000367740 NXT2Q9NPJ8 142 aaKnown RBP7.54□□□□□ -1.2
VAMP4-202ENST00000367740 TRAV9-1A0A075B6T8 112 aa7.53□□□□□ -1.2
VAMP4-202ENST00000367740 G0S2P27469 103 aa7.53□□□□□ -1.2
VAMP4-202ENST00000367740 ALKAL2Q6UX46 152 aa7.52□□□□□ -1.21
VAMP4-202ENST00000367740 NAT8Q9UHE5 227 aa7.52□□□□□ -1.21
VAMP4-202ENST00000367740 LINC00158P58513 81 aa7.51□□□□□ -1.21
VAMP4-202ENST00000367740 Q6ZRX8 168 aa7.51□□□□□ -1.21
VAMP4-202ENST00000367740 BOD1L2Q8IYS8 172 aa7.51□□□□□ -1.21
VAMP4-202ENST00000367740 CHTOPQ9Y3Y2 248 aaKnown RBP7.51□□□□□ -1.21
VAMP4-202ENST00000367740 A0A0U1RRA0 63 aa7.5□□□□□ -1.21
VAMP4-202ENST00000367740 PMVKQ15126 192 aa7.5□□□□□ -1.21
VAMP4-202ENST00000367740 KIAA1644Q3SXP7 199 aa7.5□□□□□ -1.21
VAMP4-202ENST00000367740 ZNF22P17026 224 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms