RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 HERVK_113P61574 105 aa2.5□□□□□ -2.01
CNOT4-202ENST00000356162 C7orf33Q8WU49 177 aa2.5□□□□□ -2.01
CNOT4-202ENST00000356162 H0Y8G0 127 aa2.5□□□□□ -2.01
CNOT4-202ENST00000356162 IGKCP01834 107 aa2.5□□□□□ -2.01
CNOT4-202ENST00000356162 PET117Q6UWS5 81 aa2.5□□□□□ -2.01
CNOT4-202ENST00000356162 Q6ZRP5 223 aa2.5□□□□□ -2.01
CNOT4-202ENST00000356162 FAT1Q14517 4588 aa2.49□□□□□ -2.01
CNOT4-202ENST00000356162 SYS1-DBNDD2H3BUS1 97 aa2.49□□□□□ -2.01
CNOT4-202ENST00000356162 KRTAP10-4P60372 401 aaPredicted RBP2.49□□□□□ -2.01
CNOT4-202ENST00000356162 C9orf116Q5BN46 136 aaPredicted RBP2.49□□□□□ -2.01
CNOT4-202ENST00000356162 LINC01545Q5VT33 79 aa2.49□□□□□ -2.01
CNOT4-202ENST00000356162 PLEKHB2Q96CS7 222 aa2.49□□□□□ -2.01
CNOT4-202ENST00000356162 DPH3Q96FX2 82 aa2.49□□□□□ -2.01
CNOT4-202ENST00000356162 ZNF625Q96I27 306 aaPredicted RBP2.49□□□□□ -2.01
CNOT4-202ENST00000356162 C20orf202A1L168 122 aa2.49□□□□□ -2.01
CNOT4-202ENST00000356162 LEPROTO15243 131 aa2.49□□□□□ -2.01
CNOT4-202ENST00000356162 AKR1D1P51857 326 aa2.49□□□□□ -2.01
CNOT4-202ENST00000356162 HERV-K104P63124 156 aa2.49□□□□□ -2.01
CNOT4-202ENST00000356162 GAGE2EQ4V326 116 aa2.49□□□□□ -2.01
CNOT4-202ENST00000356162 GAGE2DQ9UEU5 116 aa2.49□□□□□ -2.01
CNOT4-202ENST00000356162 ERG28Q9UKR5 140 aa2.49□□□□□ -2.01
CNOT4-202ENST00000356162 ABCA13Q86UQ4 5058 aa2.49□□□□□ -2.01
CNOT4-202ENST00000356162 PCLOQ9Y6V0 5065 aa2.48□□□□□ -2.01
CNOT4-202ENST00000356162 A0A1W2PNN7 141 aa2.48□□□□□ -2.01
CNOT4-202ENST00000356162 INAFM2P0DMQ5 153 aa2.48□□□□□ -2.01
CNOT4-202ENST00000356162 NMUP48645 174 aa2.48□□□□□ -2.01
CNOT4-202ENST00000356162 PRR3P79522 188 aaKnown RBP2.48□□□□□ -2.01
CNOT4-202ENST00000356162 COX17Q14061 63 aa2.48□□□□□ -2.01
CNOT4-202ENST00000356162 C9orf129Q5T035 196 aaKnown RBP2.48□□□□□ -2.01
CNOT4-202ENST00000356162 FAM19A5Q7Z5A7 132 aaPredicted RBP2.48□□□□□ -2.01
CNOT4-202ENST00000356162 IGLV5-37A0A075B6J1 123 aa2.48□□□□□ -2.01
CNOT4-202ENST00000356162 MYMXA0A1B0GTQ4 84 aa2.48□□□□□ -2.01
CNOT4-202ENST00000356162 M0QXV9 152 aa2.48□□□□□ -2.01
CNOT4-202ENST00000356162 C3orf79P0CE67 100 aa2.48□□□□□ -2.01
CNOT4-202ENST00000356162 HIST3H2BBQ8N257 126 aa2.48□□□□□ -2.01
CNOT4-202ENST00000356162 PMCHL2Q9BQD1 86 aa2.48□□□□□ -2.01
CNOT4-202ENST00000356162 TP73-AS1Q9UF72 201 aa2.48□□□□□ -2.01
CNOT4-202ENST00000356162 NDUFA12Q9UI09 145 aa2.48□□□□□ -2.01
CNOT4-202ENST00000356162 LINC00587B1AMM8 73 aa2.47□□□□□ -2.01
CNOT4-202ENST00000356162 E9PLD3 99 aa2.47□□□□□ -2.01
CNOT4-202ENST00000356162 S100A6P06703 90 aa2.47□□□□□ -2.01
CNOT4-202ENST00000356162 TSPEAR-AS2P59090 65 aa2.47□□□□□ -2.01
CNOT4-202ENST00000356162 KRTDAPP60985 99 aa2.47□□□□□ -2.01
CNOT4-202ENST00000356162 PHF5AQ7RTV0 110 aaKnown RBP2.47□□□□□ -2.01
CNOT4-202ENST00000356162 FAM168BA1KXE4 195 aa2.47□□□□□ -2.01
CNOT4-202ENST00000356162 J3QQQ9 107 aa2.47□□□□□ -2.01
CNOT4-202ENST00000356162 LGALS3P17931 250 aaKnown RBP2.47□□□□□ -2.01
CNOT4-202ENST00000356162 S100A2P29034 98 aa2.47□□□□□ -2.01
CNOT4-202ENST00000356162 MEIG1Q5JSS6 88 aa2.47□□□□□ -2.01
CNOT4-202ENST00000356162 SERTAD4-AS1Q5TG53 156 aa2.47□□□□□ -2.01
CNOT4-202ENST00000356162 XAGE1AQ9HD64 81 aa2.47□□□□□ -2.01
CNOT4-202ENST00000356162 PFN2P35080 140 aa2.46□□□□□ -2.02
CNOT4-202ENST00000356162 KRTAP7-1Q8IUC3 87 aa2.46□□□□□ -2.02
CNOT4-202ENST00000356162 HIST1H2BLQ99880 126 aa2.46□□□□□ -2.02
CNOT4-202ENST00000356162 SND1-IT1Q9HBX3 110 aa2.46□□□□□ -2.02
CNOT4-202ENST00000356162 LINC00158P58513 81 aa2.46□□□□□ -2.02
CNOT4-202ENST00000356162 UBE2BP63146 152 aa2.46□□□□□ -2.02
CNOT4-202ENST00000356162 NKAPP1Q8N9T2 125 aa2.46□□□□□ -2.02
CNOT4-202ENST00000356162 C22orf24Q9Y442 160 aa2.46□□□□□ -2.02
CNOT4-202ENST00000356162 SMIM13P0DJ93 91 aa2.45□□□□□ -2.02
CNOT4-202ENST00000356162 VPREB1P12018 145 aa2.45□□□□□ -2.02
CNOT4-202ENST00000356162 HNRNPA3P51991 378 aaKnown RBP2.45□□□□□ -2.02
CNOT4-202ENST00000356162 SNRPEP62304 92 aaKnown RBP2.45□□□□□ -2.02
CNOT4-202ENST00000356162 RPL24P83731 157 aaKnown RBP2.45□□□□□ -2.02
CNOT4-202ENST00000356162 MRPL55Q7Z7F7 128 aaKnown RBP2.45□□□□□ -2.02
CNOT4-202ENST00000356162 PSORS1C2Q9UIG4 136 aa2.45□□□□□ -2.02
CNOT4-202ENST00000356162 FAT3Q8TDW7 4589 aa2.45□□□□□ -2.02
CNOT4-202ENST00000356162 C5orf52A6NGY3 159 aa2.45□□□□□ -2.02
CNOT4-202ENST00000356162 TIMM17BO60830 172 aa2.45□□□□□ -2.02
CNOT4-202ENST00000356162 MIR7-3HGQ8N6C7 128 aa2.45□□□□□ -2.02
CNOT4-202ENST00000356162 LOC107984156A0A0G2JMH3 177 aa2.44□□□□□ -2.02
CNOT4-202ENST00000356162 PRYO14603 147 aa2.44□□□□□ -2.02
CNOT4-202ENST00000356162 OXTP01178 125 aa2.44□□□□□ -2.02
CNOT4-202ENST00000356162 C1orf137Q5JT78 98 aa2.44□□□□□ -2.02
CNOT4-202ENST00000356162 SPINK6Q6UWN8 80 aa2.44□□□□□ -2.02
CNOT4-202ENST00000356162 ARL17AQ8IVW1 177 aa2.44□□□□□ -2.02
CNOT4-202ENST00000356162 MYCBP2O75592 4640 aa2.44□□□□□ -2.02
CNOT4-202ENST00000356162 A0A0J9YXY3 114 aa2.44□□□□□ -2.02
CNOT4-202ENST00000356162 ZNF815PA8K554 130 aa2.44□□□□□ -2.02
CNOT4-202ENST00000356162 KRTAP29-1A8MX34 341 aaPredicted RBP2.44□□□□□ -2.02
CNOT4-202ENST00000356162 IGLV7-43P04211 117 aa2.44□□□□□ -2.02
CNOT4-202ENST00000356162 KRTAP11-1Q8IUC1 163 aa2.44□□□□□ -2.02
CNOT4-202ENST00000356162 LINC00167Q96N53 147 aa2.44□□□□□ -2.02
CNOT4-202ENST00000356162 IGKV2D-26A0A0A0MRZ7 120 aa2.43□□□□□ -2.02
CNOT4-202ENST00000356162 A0A0U1RRA0 63 aa2.43□□□□□ -2.02
CNOT4-202ENST00000356162 M0R378 163 aa2.43□□□□□ -2.02
CNOT4-202ENST00000356162 BCE1O60756 84 aa2.43□□□□□ -2.02
CNOT4-202ENST00000356162 TRBV10-2A0A0K0K1G8 114 aa2.43□□□□□ -2.02
CNOT4-202ENST00000356162 HSBP1L1C9JCN9 74 aa2.43□□□□□ -2.02
CNOT4-202ENST00000356162 NDUFC2O95298 119 aa2.43□□□□□ -2.02
CNOT4-202ENST00000356162 SRSF9Q13242 221 aaKnown RBP eCLIP2.43□□□□□ -2.02
CNOT4-202ENST00000356162 REG3GQ6UW15 175 aa2.43□□□□□ -2.02
CNOT4-202ENST00000356162 BOD1L2Q8IYS8 172 aa2.43□□□□□ -2.02
CNOT4-202ENST00000356162 ATOH7Q8N100 152 aa2.43□□□□□ -2.02
CNOT4-202ENST00000356162 Q8NDZ9 215 aa2.43□□□□□ -2.02
CNOT4-202ENST00000356162 DIRC1Q969H9 104 aa2.43□□□□□ -2.02
CNOT4-202ENST00000356162 MIEN1Q9BRT3 115 aa2.43□□□□□ -2.02
CNOT4-202ENST00000356162 SPANXB1Q9NS25 103 aaPredicted RBP2.43□□□□□ -2.02
CNOT4-202ENST00000356162 IGLV1-50A0A075B6I6 118 aa2.42□□□□□ -2.02
CNOT4-202ENST00000356162 GAGE10A6NGK3 116 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms