RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 EPM2AB3EWF7 344 aa3.72□□□□□ -1.81
SSX3-201ENST00000298396 LEPROTO15243 131 aa3.72□□□□□ -1.81
SSX3-201ENST00000298396 CDK2AP2O75956 126 aa3.72□□□□□ -1.81
SSX3-201ENST00000298396 PRSS2P07478 247 aa3.72□□□□□ -1.81
SSX3-201ENST00000298396 TLX1NBP0CAT3 122 aa3.72□□□□□ -1.81
SSX3-201ENST00000298396 C9orf129Q5T035 196 aaKnown RBP3.72□□□□□ -1.81
SSX3-201ENST00000298396 SCXQ7RTU7 201 aa3.72□□□□□ -1.81
SSX3-201ENST00000298396 TTTY13Q9BZ97 58 aa3.72□□□□□ -1.81
SSX3-201ENST00000298396 PCLOQ9Y6V0 5065 aa3.71□□□□□ -1.82
SSX3-201ENST00000298396 SRRM2Q9UQ35 2752 aaKnown RBP3.71□□□□□ -1.82
SSX3-201ENST00000298396 A0A1W2PNN7 141 aa3.71□□□□□ -1.82
SSX3-201ENST00000298396 FAM168BA1KXE4 195 aa3.71□□□□□ -1.82
SSX3-201ENST00000298396 E9PLD3 99 aa3.71□□□□□ -1.82
SSX3-201ENST00000298396 J3QQQ9 107 aa3.71□□□□□ -1.82
SSX3-201ENST00000298396 CXCL5P42830 114 aa3.71□□□□□ -1.82
SSX3-201ENST00000298396 CKS1BP61024 79 aa3.71□□□□□ -1.82
SSX3-201ENST00000298396 RPL18AQ02543 176 aaKnown RBP3.71□□□□□ -1.82
SSX3-201ENST00000298396 GAGE2BQ13066 116 aa3.71□□□□□ -1.82
SSX3-201ENST00000298396 Q8NDZ9 215 aa3.71□□□□□ -1.82
SSX3-201ENST00000298396 MPLKIPQ8TAP9 179 aa3.71□□□□□ -1.82
SSX3-201ENST00000298396 CIRBP-AS1Q8TBR5 109 aa3.71□□□□□ -1.82
SSX3-201ENST00000298396 PLAC8Q9NZF1 115 aa3.71□□□□□ -1.82
SSX3-201ENST00000298396 FLG2Q5D862 2391 aaPredicted RBP3.7□□□□□ -1.82
SSX3-201ENST00000298396 A0A087WYN8 130 aa3.7□□□□□ -1.82
SSX3-201ENST00000298396 NDUFC2-KCTD14E9PQ53 114 aa3.7□□□□□ -1.82
SSX3-201ENST00000298396 KRTAP10-4P60372 401 aaPredicted RBP3.7□□□□□ -1.82
SSX3-201ENST00000298396 GAGE2EQ4V326 116 aa3.7□□□□□ -1.82
SSX3-201ENST00000298396 PLEKHB2Q96CS7 222 aa3.7□□□□□ -1.82
SSX3-201ENST00000298396 GAGE2DQ9UEU5 116 aa3.7□□□□□ -1.82
SSX3-201ENST00000298396 TP73-AS1Q9UF72 201 aa3.7□□□□□ -1.82
SSX3-201ENST00000298396 NDUFA12Q9UI09 145 aa3.7□□□□□ -1.82
SSX3-201ENST00000298396 ERG28Q9UKR5 140 aa3.7□□□□□ -1.82
SSX3-201ENST00000298396 C20orf202A1L168 122 aa3.69□□□□□ -1.82
SSX3-201ENST00000298396 SMR3BP02814 79 aaPredicted RBP3.69□□□□□ -1.82
SSX3-201ENST00000298396 SMIM13P0DJ93 91 aa3.69□□□□□ -1.82
SSX3-201ENST00000298396 PFN2P35080 140 aa3.69□□□□□ -1.82
SSX3-201ENST00000298396 HERVK_113P61574 105 aa3.69□□□□□ -1.82
SSX3-201ENST00000298396 SERTAD4-AS1Q5TG53 156 aa3.69□□□□□ -1.82
SSX3-201ENST00000298396 KRTAP11-1Q8IUC1 163 aa3.69□□□□□ -1.82
SSX3-201ENST00000298396 PCP2Q8IVA1 136 aa3.69□□□□□ -1.82
SSX3-201ENST00000298396 LITAFQ99732 161 aa3.69□□□□□ -1.82
SSX3-201ENST00000298396 XAGE1AQ9HD64 81 aa3.69□□□□□ -1.82
SSX3-201ENST00000298396 FAT3Q8TDW7 4589 aa3.69□□□□□ -1.82
SSX3-201ENST00000298396 A0A0J9YXY3 114 aa3.68□□□□□ -1.82
SSX3-201ENST00000298396 A0A0U1RRA0 63 aa3.68□□□□□ -1.82
SSX3-201ENST00000298396 MYMXA0A1B0GTQ4 84 aa3.68□□□□□ -1.82
SSX3-201ENST00000298396 SCGB1D1O95968 90 aa3.68□□□□□ -1.82
SSX3-201ENST00000298396 NMUP48645 174 aa3.68□□□□□ -1.82
SSX3-201ENST00000298396 JOSD1Q15040 202 aaPredicted RBP3.68□□□□□ -1.82
SSX3-201ENST00000298396 PYY3Q5JQD4 70 aa3.68□□□□□ -1.82
SSX3-201ENST00000298396 ADAMTSL4-AS1Q5T5F5 129 aa3.68□□□□□ -1.82
SSX3-201ENST00000298396 SND1-IT1Q9HBX3 110 aa3.68□□□□□ -1.82
SSX3-201ENST00000298396 TNXBP22105 4242 aa3.67□□□□□ -1.82
SSX3-201ENST00000298396 LGALS3P17931 250 aaKnown RBP3.67□□□□□ -1.82
SSX3-201ENST00000298396 HERV-K104P63124 156 aa3.67□□□□□ -1.82
SSX3-201ENST00000298396 COX17Q14061 63 aa3.67□□□□□ -1.82
SSX3-201ENST00000298396 SOSTDC1Q6X4U4 206 aa3.67□□□□□ -1.82
SSX3-201ENST00000298396 PHF5AQ7RTV0 110 aaKnown RBP3.67□□□□□ -1.82
SSX3-201ENST00000298396 FAM19A5Q7Z5A7 132 aaPredicted RBP3.67□□□□□ -1.82
SSX3-201ENST00000298396 DAND5Q8N907 189 aa3.67□□□□□ -1.82
SSX3-201ENST00000298396 MYCBP2O75592 4640 aa3.67□□□□□ -1.82
SSX3-201ENST00000298396 LRP1Q07954 4544 aaKnown RBP3.67□□□□□ -1.82
SSX3-201ENST00000298396 LOC105371267A0A1B0GV96 52 aa3.66□□□□□ -1.82
SSX3-201ENST00000298396 ZNF815PA8K554 130 aa3.66□□□□□ -1.82
SSX3-201ENST00000298396 VPREB1P12018 145 aa3.66□□□□□ -1.82
SSX3-201ENST00000298396 SFTA2Q6UW10 78 aa3.66□□□□□ -1.82
SSX3-201ENST00000298396 MIR7-3HGQ8N6C7 128 aa3.66□□□□□ -1.82
SSX3-201ENST00000298396 LINC00474Q9P2X8 69 aa3.66□□□□□ -1.82
SSX3-201ENST00000298396 PKIGQ9Y2B9 76 aa3.66□□□□□ -1.82
SSX3-201ENST00000298396 IGLV5-37A0A075B6J1 123 aa3.65□□□□□ -1.83
SSX3-201ENST00000298396 LOC107984156A0A0G2JMH3 177 aa3.65□□□□□ -1.83
SSX3-201ENST00000298396 AKR1D1P51857 326 aa3.65□□□□□ -1.83
SSX3-201ENST00000298396 HNRNPA3P51991 378 aaKnown RBP3.65□□□□□ -1.83
SSX3-201ENST00000298396 LINC00158P58513 81 aa3.65□□□□□ -1.83
SSX3-201ENST00000298396 MEIG1Q5JSS6 88 aa3.65□□□□□ -1.83
SSX3-201ENST00000298396 Q5VSD8 79 aa3.65□□□□□ -1.83
SSX3-201ENST00000298396 ARL17AQ8IVW1 177 aa3.65□□□□□ -1.83
SSX3-201ENST00000298396 M0QXV9 152 aa3.64□□□□□ -1.83
SSX3-201ENST00000298396 TIMM17BO60830 172 aa3.64□□□□□ -1.83
SSX3-201ENST00000298396 COX8AP10176 69 aa3.64□□□□□ -1.83
SSX3-201ENST00000298396 PRR3P79522 188 aaKnown RBP3.64□□□□□ -1.83
SSX3-201ENST00000298396 BOD1L2Q8IYS8 172 aa3.64□□□□□ -1.83
SSX3-201ENST00000298396 DPH3Q96FX2 82 aa3.64□□□□□ -1.83
SSX3-201ENST00000298396 PAM16Q9Y3D7 125 aa3.64□□□□□ -1.83
SSX3-201ENST00000298396 C22orf24Q9Y442 160 aa3.64□□□□□ -1.83
SSX3-201ENST00000298396 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
SSX3-201ENST00000298396 NPC2P61916 151 aa3.63□□□□□ -1.83
SSX3-201ENST00000298396 SPATA45Q537H7 98 aa3.63□□□□□ -1.83
SSX3-201ENST00000298396 C7orf33Q8WU49 177 aa3.63□□□□□ -1.83
SSX3-201ENST00000298396 C14orf144Q96I85 54 aa3.63□□□□□ -1.83
SSX3-201ENST00000298396 LINC00167Q96N53 147 aa3.63□□□□□ -1.83
SSX3-201ENST00000298396 SPANXDQ9BXN6 97 aa3.63□□□□□ -1.83
SSX3-201ENST00000298396 SPANXCQ9NY87 97 aa3.63□□□□□ -1.83
SSX3-201ENST00000298396 PSORS1C2Q9UIG4 136 aa3.63□□□□□ -1.83
SSX3-201ENST00000298396 GAGE10A6NGK3 116 aa3.62□□□□□ -1.83
SSX3-201ENST00000298396 HSBP1L1C9JCN9 74 aa3.62□□□□□ -1.83
SSX3-201ENST00000298396 RPL37AP61513 92 aaKnown RBP3.62□□□□□ -1.83
SSX3-201ENST00000298396 C2orf91Q6ZV80 131 aa3.62□□□□□ -1.83
SSX3-201ENST00000298396 MRPL55Q7Z7F7 128 aaKnown RBP3.62□□□□□ -1.83
SSX3-201ENST00000298396 LINC00308Q8TCZ7 52 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms