RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 J3QQQ9 107 aa10.92□□□□□ -0.66
ATG3-201ENST00000283290 COX8AP10176 69 aa10.92□□□□□ -0.66
ATG3-201ENST00000283290 TTTY13Q9BZ97 58 aa10.92□□□□□ -0.66
ATG3-201ENST00000283290 E9PLD3 99 aa10.91□□□□□ -0.66
ATG3-201ENST00000283290 NMUP48645 174 aa10.91□□□□□ -0.66
ATG3-201ENST00000283290 SERTAD4-AS1Q5TG53 156 aa10.91□□□□□ -0.66
ATG3-201ENST00000283290 PHF5AQ7RTV0 110 aaKnown RBP10.91□□□□□ -0.66
ATG3-201ENST00000283290 SLC25A34Q6PIV7 304 aa10.9□□□□□ -0.66
ATG3-201ENST00000283290 PLEKHB2Q96CS7 222 aa10.9□□□□□ -0.66
ATG3-201ENST00000283290 PLA2G1BP04054 148 aaKnown RBP10.9□□□□□ -0.67
ATG3-201ENST00000283290 SMIM13P0DJ93 91 aa10.9□□□□□ -0.67
ATG3-201ENST00000283290 LGALS3P17931 250 aaKnown RBP10.9□□□□□ -0.67
ATG3-201ENST00000283290 LINC00158P58513 81 aa10.89□□□□□ -0.67
ATG3-201ENST00000283290 MEIG1Q5JSS6 88 aa10.89□□□□□ -0.67
ATG3-201ENST00000283290 PCP2Q8IVA1 136 aa10.89□□□□□ -0.67
ATG3-201ENST00000283290 BOD1L2Q8IYS8 172 aa10.89□□□□□ -0.67
ATG3-201ENST00000283290 DLEU1O43261 78 aa10.88□□□□□ -0.67
ATG3-201ENST00000283290 TP73-AS1Q9UF72 201 aa10.88□□□□□ -0.67
ATG3-201ENST00000283290 INAFM2P0DMQ5 153 aa10.87□□□□□ -0.67
ATG3-201ENST00000283290 KRTAP10-4P60372 401 aaPredicted RBP10.87□□□□□ -0.67
ATG3-201ENST00000283290 KRTAP11-1Q8IUC1 163 aa10.87□□□□□ -0.67
ATG3-201ENST00000283290 SND1-IT1Q9HBX3 110 aa10.87□□□□□ -0.67
ATG3-201ENST00000283290 MYMXA0A1B0GTQ4 84 aa10.86□□□□□ -0.67
ATG3-201ENST00000283290 LINC00587B1AMM8 73 aa10.86□□□□□ -0.67
ATG3-201ENST00000283290 DAND5Q8N907 189 aa10.86□□□□□ -0.67
ATG3-201ENST00000283290 RPL37AP61513 92 aaKnown RBP10.86□□□□□ -0.67
ATG3-201ENST00000283290 Q8NDZ9 215 aa10.86□□□□□ -0.67
ATG3-201ENST00000283290 M0QXV9 152 aa10.85□□□□□ -0.67
ATG3-201ENST00000283290 HNRNPA3P51991 378 aaKnown RBP10.85□□□□□ -0.67
ATG3-201ENST00000283290 FLG2Q5D862 2391 aaPredicted RBP10.84□□□□□ -0.67
ATG3-201ENST00000283290 HERV-K104P63124 156 aa10.83□□□□□ -0.68
ATG3-201ENST00000283290 SFTA2Q6UW10 78 aa10.83□□□□□ -0.68
ATG3-201ENST00000283290 MIR7-3HGQ8N6C7 128 aa10.83□□□□□ -0.68
ATG3-201ENST00000283290 C7orf33Q8WU49 177 aa10.83□□□□□ -0.68
ATG3-201ENST00000283290 MYCBP2O75592 4640 aa10.83□□□□□ -0.68
ATG3-201ENST00000283290 COX17Q14061 63 aa10.82□□□□□ -0.68
ATG3-201ENST00000283290 C2orf91Q6ZV80 131 aa10.82□□□□□ -0.68
ATG3-201ENST00000283290 A0A0J9YXY3 114 aa10.82□□□□□ -0.68
ATG3-201ENST00000283290 GAGE10A6NGK3 116 aa10.82□□□□□ -0.68
ATG3-201ENST00000283290 C22orf24Q9Y442 160 aa10.82□□□□□ -0.68
ATG3-201ENST00000283290 PKHD1L1Q86WI1 4243 aa10.81□□□□□ -0.68
ATG3-201ENST00000283290 ZNF815PA8K554 130 aa10.81□□□□□ -0.68
ATG3-201ENST00000283290 NPC2P61916 151 aa10.81□□□□□ -0.68
ATG3-201ENST00000283290 CTAG1AP78358 180 aa10.8□□□□□ -0.68
ATG3-201ENST00000283290 ADAMTSL4-AS1Q5T5F5 129 aa10.79□□□□□ -0.68
ATG3-201ENST00000283290 UBE2BP63146 152 aa10.78□□□□□ -0.68
ATG3-201ENST00000283290 PRR3P79522 188 aaKnown RBP10.78□□□□□ -0.68
ATG3-201ENST00000283290 HIGD1BQ9P298 99 aa10.78□□□□□ -0.68
ATG3-201ENST00000283290 RPL37AP8A6NKH3 93 aa10.77□□□□□ -0.68
ATG3-201ENST00000283290 EIF4EBP3O60516 100 aaPredicted RBP10.77□□□□□ -0.68
ATG3-201ENST00000283290 PSORS1C2Q9UIG4 136 aa10.77□□□□□ -0.68
ATG3-201ENST00000283290 VPREB1P12018 145 aa10.77□□□□□ -0.69
ATG3-201ENST00000283290 MRPL55Q7Z7F7 128 aaKnown RBP10.76□□□□□ -0.69
ATG3-201ENST00000283290 NKAPP1Q8N9T2 125 aa10.75□□□□□ -0.69
ATG3-201ENST00000283290 LINC00167Q96N53 147 aa10.75□□□□□ -0.69
ATG3-201ENST00000283290 SOSTDC1Q6X4U4 206 aa10.74□□□□□ -0.69
ATG3-201ENST00000283290 LITAFQ99732 161 aa10.74□□□□□ -0.69
ATG3-201ENST00000283290 PLA2G2DQ9UNK4 145 aa10.74□□□□□ -0.69
ATG3-201ENST00000283290 NCR3O14931 201 aa10.73□□□□□ -0.69
ATG3-201ENST00000283290 C1orf137Q5JT78 98 aa10.73□□□□□ -0.69
ATG3-201ENST00000283290 SCGB1D4Q6XE38 83 aa10.73□□□□□ -0.69
ATG3-201ENST00000283290 IGKV2-28A0A075B6P5 120 aa10.73□□□□□ -0.69
ATG3-201ENST00000283290 IGKV2D-28P01615 120 aa10.73□□□□□ -0.69
ATG3-201ENST00000283290 M0R143 59 aa10.72□□□□□ -0.69
ATG3-201ENST00000283290 IGLV5-37A0A075B6J1 123 aa10.71□□□□□ -0.69
ATG3-201ENST00000283290 HSD52Q0P140 79 aa10.71□□□□□ -0.69
ATG3-201ENST00000283290 SNHG12Q9BXW3 62 aa10.71□□□□□ -0.69
ATG3-201ENST00000283290 LRP1Q07954 4544 aaKnown RBP10.7□□□□□ -0.7
ATG3-201ENST00000283290 HINT1P49773 126 aaPredicted RBP10.7□□□□□ -0.7
ATG3-201ENST00000283290 RPL24P83731 157 aaKnown RBP10.69□□□□□ -0.7
ATG3-201ENST00000283290 LBHQ53QV2 105 aaPredicted RBP10.69□□□□□ -0.7
ATG3-201ENST00000283290 TAL2Q16559 108 aa10.69□□□□□ -0.7
ATG3-201ENST00000283290 FAT3Q8TDW7 4589 aa10.68□□□□□ -0.7
ATG3-201ENST00000283290 BVES-AS1Q5T3Y7 98 aa10.68□□□□□ -0.7
ATG3-201ENST00000283290 SPANXB1Q9NS25 103 aaPredicted RBP10.68□□□□□ -0.7
ATG3-201ENST00000283290 TMEM238C9JI98 176 aa10.66□□□□□ -0.7
ATG3-201ENST00000283290 TIMM17BO60830 172 aa10.66□□□□□ -0.7
ATG3-201ENST00000283290 BATFQ16520 125 aa10.66□□□□□ -0.7
ATG3-201ENST00000283290 LINC00308Q8TCZ7 52 aa10.66□□□□□ -0.7
ATG3-201ENST00000283290 HIST1H4GQ99525 98 aa10.66□□□□□ -0.7
ATG3-201ENST00000283290 DMBT1Q9UGM3 2413 aaPredicted RBP10.65□□□□□ -0.7
ATG3-201ENST00000283290 IGLV1-50A0A075B6I6 118 aa10.65□□□□□ -0.71
ATG3-201ENST00000283290 CEND1Q8N111 149 aa10.65□□□□□ -0.71
ATG3-201ENST00000283290 LOC107984156A0A0G2JMH3 177 aa10.64□□□□□ -0.71
ATG3-201ENST00000283290 M0R378 163 aa10.64□□□□□ -0.71
ATG3-201ENST00000283290 IGLV7-43P04211 117 aa10.64□□□□□ -0.71
ATG3-201ENST00000283290 SRSF9Q13242 221 aaKnown RBP eCLIP10.64□□□□□ -0.71
ATG3-201ENST00000283290 ARL17AQ8IVW1 177 aa10.64□□□□□ -0.71
ATG3-201ENST00000283290 HERC1Q15751 4861 aa10.62□□□□□ -0.71
ATG3-201ENST00000283290 TRBV10-3A0A0K0K1G6 114 aa10.61□□□□□ -0.71
ATG3-201ENST00000283290 KRTAP29-1A8MX34 341 aaPredicted RBP10.61□□□□□ -0.71
ATG3-201ENST00000283290 SPANXDQ9BXN6 97 aa10.61□□□□□ -0.71
ATG3-201ENST00000283290 SPANXCQ9NY87 97 aa10.61□□□□□ -0.71
ATG3-201ENST00000283290 FXYD2P54710 66 aa10.6□□□□□ -0.71
ATG3-201ENST00000283290 Q6ZVH6 145 aa10.6□□□□□ -0.71
ATG3-201ENST00000283290 MUSTN1Q8IVN3 82 aa10.6□□□□□ -0.71
ATG3-201ENST00000283290 TMEM126AQ9H061 195 aa10.59□□□□□ -0.71
ATG3-201ENST00000283290 J3QL48 77 aa10.58□□□□□ -0.72
ATG3-201ENST00000283290 BCE1O60756 84 aa10.58□□□□□ -0.72
ATG3-201ENST00000283290 PRLHP81277 87 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms