RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 RPL18AQ02543 176 aaKnown RBP16.16■□□□□ 0.18
NKX2-1-205ENST00000546983 GAGE2BQ13066 116 aa16.16■□□□□ 0.18
NKX2-1-205ENST00000546983 STPG4Q8N801 248 aa16.16■□□□□ 0.18
NKX2-1-205ENST00000546983 C7orf33Q8WU49 177 aa16.16■□□□□ 0.18
NKX2-1-205ENST00000546983 F8VRH5 84 aa16.15■□□□□ 0.18
NKX2-1-205ENST00000546983 CHTOPQ9Y3Y2 248 aaKnown RBP16.15■□□□□ 0.18
NKX2-1-205ENST00000546983 SFTA2Q6UW10 78 aa16.14■□□□□ 0.17
NKX2-1-205ENST00000546983 C6orf48Q9UBA6 75 aa16.14■□□□□ 0.17
NKX2-1-205ENST00000546983 FAM19A2Q8N3H0 131 aa16.13■□□□□ 0.17
NKX2-1-205ENST00000546983 COX7B2Q8TF08 81 aa16.13■□□□□ 0.17
NKX2-1-205ENST00000546983 C10orf25Q5T742 122 aa16.12■□□□□ 0.17
NKX2-1-205ENST00000546983 KRTAP4-5Q9BYR2 181 aa16.12■□□□□ 0.17
NKX2-1-205ENST00000546983 NDUFC2-KCTD14E9PQ53 114 aa16.11■□□□□ 0.17
NKX2-1-205ENST00000546983 C2orf82Q6UX34 121 aa16.11■□□□□ 0.17
NKX2-1-205ENST00000546983 ZNF22P17026 224 aaPredicted RBP16.1■□□□□ 0.17
NKX2-1-205ENST00000546983 KRTAP17-1Q9BYP8 105 aa16.1■□□□□ 0.17
NKX2-1-205ENST00000546983 SPINK8P0C7L1 97 aa16.09■□□□□ 0.17
NKX2-1-205ENST00000546983 INAFM2P0DMQ5 153 aa16.09■□□□□ 0.17
NKX2-1-205ENST00000546983 RPL37AP61513 92 aaKnown RBP16.09■□□□□ 0.17
NKX2-1-205ENST00000546983 TMEM170BQ5T4T1 132 aa16.09■□□□□ 0.17
NKX2-1-205ENST00000546983 IGLV5-39A0A0G2JS06 123 aa16.08■□□□□ 0.16
NKX2-1-205ENST00000546983 HIST1H2BKO60814 126 aa16.08■□□□□ 0.16
NKX2-1-205ENST00000546983 HIST1H2BJP06899 126 aa16.08■□□□□ 0.16
NKX2-1-205ENST00000546983 HIST1H2BOP23527 126 aa16.08■□□□□ 0.16
NKX2-1-205ENST00000546983 HIST1H2BBP33778 126 aa16.08■□□□□ 0.16
NKX2-1-205ENST00000546983 HIST1H2BDP58876 126 aa16.08■□□□□ 0.16
NKX2-1-205ENST00000546983 HIST1H2BCP62807 126 aa16.08■□□□□ 0.16
NKX2-1-205ENST00000546983 HIST2H2BEQ16778 126 aa16.08■□□□□ 0.16
NKX2-1-205ENST00000546983 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.08■□□□□ 0.16
NKX2-1-205ENST00000546983 HIST1H2BHQ93079 126 aa16.08■□□□□ 0.16
NKX2-1-205ENST00000546983 HIST1H2BNQ99877 126 aa16.08■□□□□ 0.16
NKX2-1-205ENST00000546983 HIST1H2BMQ99879 126 aa16.08■□□□□ 0.16
NKX2-1-205ENST00000546983 C11orf86A6NJI1 115 aa16.06■□□□□ 0.16
NKX2-1-205ENST00000546983 LINC00310P59036 64 aa16.06■□□□□ 0.16
NKX2-1-205ENST00000546983 Q6ZRP5 223 aa16.05■□□□□ 0.16
NKX2-1-205ENST00000546983 PLNP26678 52 aa16.03■□□□□ 0.16
NKX2-1-205ENST00000546983 MAP1LC3CQ9BXW4 147 aa16.03■□□□□ 0.16
NKX2-1-205ENST00000546983 C9orf116Q5BN46 136 aaPredicted RBP16.02■□□□□ 0.16
NKX2-1-205ENST00000546983 DNAH8Q96JB1 4490 aa16.02■□□□□ 0.15
NKX2-1-205ENST00000546983 ATP6V1G1O75348 118 aa16.01■□□□□ 0.15
NKX2-1-205ENST00000546983 GAGE2EQ4V326 116 aa16.01■□□□□ 0.15
NKX2-1-205ENST00000546983 GAGE2DQ9UEU5 116 aa16.01■□□□□ 0.15
NKX2-1-205ENST00000546983 FABP4P15090 132 aa16■□□□□ 0.15
NKX2-1-205ENST00000546983 ODF1Q14990 250 aa16■□□□□ 0.15
NKX2-1-205ENST00000546983 NUPR1O60356 82 aa15.99■□□□□ 0.15
NKX2-1-205ENST00000546983 COA6Q5JTJ3 125 aaKnown RBP15.98■□□□□ 0.15
NKX2-1-205ENST00000546983 TMEM223A0PJW6 202 aa15.97■□□□□ 0.15
NKX2-1-205ENST00000546983 H0Y8G0 127 aa15.97■□□□□ 0.15
NKX2-1-205ENST00000546983 COX17Q14061 63 aa15.97■□□□□ 0.15
NKX2-1-205ENST00000546983 A0A1W2PNN7 141 aa15.95■□□□□ 0.14
NKX2-1-205ENST00000546983 DPM2O94777 84 aa15.94■□□□□ 0.14
NKX2-1-205ENST00000546983 SRRM2Q9UQ35 2752 aaKnown RBP15.93■□□□□ 0.14
NKX2-1-205ENST00000546983 KRTAP10-4P60372 401 aaPredicted RBP15.93■□□□□ 0.14
NKX2-1-205ENST00000546983 HERVK_113P61574 105 aa15.93■□□□□ 0.14
NKX2-1-205ENST00000546983 LINC00587B1AMM8 73 aa15.92■□□□□ 0.14
NKX2-1-205ENST00000546983 IGKCP01834 107 aa15.9■□□□□ 0.14
NKX2-1-205ENST00000546983 HERV-K104P63124 156 aa15.89■□□□□ 0.13
NKX2-1-205ENST00000546983 C9orf129Q5T035 196 aaKnown RBP15.89■□□□□ 0.13
NKX2-1-205ENST00000546983 PRR3P79522 188 aaKnown RBP15.88■□□□□ 0.13
NKX2-1-205ENST00000546983 LBHQ53QV2 105 aaPredicted RBP15.88■□□□□ 0.13
NKX2-1-205ENST00000546983 FAM19A5Q7Z5A7 132 aaPredicted RBP15.88■□□□□ 0.13
NKX2-1-205ENST00000546983 PLEKHB2Q96CS7 222 aa15.88■□□□□ 0.13
NKX2-1-205ENST00000546983 ERG28Q9UKR5 140 aa15.88■□□□□ 0.13
NKX2-1-205ENST00000546983 SYS1-DBNDD2H3BUS1 97 aa15.87■□□□□ 0.13
NKX2-1-205ENST00000546983 PET117Q6UWS5 81 aa15.87■□□□□ 0.13
NKX2-1-205ENST00000546983 ZNF625Q96I27 306 aaPredicted RBP15.87■□□□□ 0.13
NKX2-1-205ENST00000546983 PLA2G2DQ9UNK4 145 aa15.87■□□□□ 0.13
NKX2-1-205ENST00000546983 M0QXV9 152 aa15.86■□□□□ 0.13
NKX2-1-205ENST00000546983 AKR1D1P51857 326 aa15.86■□□□□ 0.13
NKX2-1-205ENST00000546983 TP73-AS1Q9UF72 201 aa15.86■□□□□ 0.13
NKX2-1-205ENST00000546983 FAT1Q14517 4588 aa15.85■□□□□ 0.13
NKX2-1-205ENST00000546983 XAGE1AQ9HD64 81 aa15.85■□□□□ 0.13
NKX2-1-205ENST00000546983 MYMXA0A1B0GTQ4 84 aa15.84■□□□□ 0.13
NKX2-1-205ENST00000546983 FAM168BA1KXE4 195 aa15.83■□□□□ 0.12
NKX2-1-205ENST00000546983 LEPROTO15243 131 aa15.83■□□□□ 0.12
NKX2-1-205ENST00000546983 PFN2P35080 140 aa15.83■□□□□ 0.12
NKX2-1-205ENST00000546983 PHF5AQ7RTV0 110 aaKnown RBP15.83■□□□□ 0.12
NKX2-1-205ENST00000546983 NMUP48645 174 aa15.82■□□□□ 0.12
NKX2-1-205ENST00000546983 PCLOQ9Y6V0 5065 aa15.82■□□□□ 0.12
NKX2-1-205ENST00000546983 VPS13BQ7Z7G8 4022 aa15.82■□□□□ 0.12
NKX2-1-205ENST00000546983 UBE2BP63146 152 aa15.81■□□□□ 0.12
NKX2-1-205ENST00000546983 NDUFA12Q9UI09 145 aa15.81■□□□□ 0.12
NKX2-1-205ENST00000546983 C20orf202A1L168 122 aa15.8■□□□□ 0.12
NKX2-1-205ENST00000546983 LINC01545Q5VT33 79 aa15.8■□□□□ 0.12
NKX2-1-205ENST00000546983 OXTP01178 125 aa15.79■□□□□ 0.12
NKX2-1-205ENST00000546983 RPL24P83731 157 aaKnown RBP15.79■□□□□ 0.12
NKX2-1-205ENST00000546983 C22orf24Q9Y442 160 aa15.78■□□□□ 0.12
NKX2-1-205ENST00000546983 LINC00158P58513 81 aa15.77■□□□□ 0.12
NKX2-1-205ENST00000546983 SPINK6Q6UWN8 80 aa15.77■□□□□ 0.12
NKX2-1-205ENST00000546983 PMCHL2Q9BQD1 86 aa15.77■□□□□ 0.12
NKX2-1-205ENST00000546983 PSORS1C2Q9UIG4 136 aa15.77■□□□□ 0.12
NKX2-1-205ENST00000546983 ABCA13Q86UQ4 5058 aa15.76■□□□□ 0.11
NKX2-1-205ENST00000546983 IGLV5-37A0A075B6J1 123 aa15.76■□□□□ 0.11
NKX2-1-205ENST00000546983 KRTAP29-1A8MX34 341 aaPredicted RBP15.76■□□□□ 0.11
NKX2-1-205ENST00000546983 J3QQQ9 107 aa15.76■□□□□ 0.11
NKX2-1-205ENST00000546983 S100A6P06703 90 aa15.76■□□□□ 0.11
NKX2-1-205ENST00000546983 LGALS3P17931 250 aaKnown RBP15.76■□□□□ 0.11
NKX2-1-205ENST00000546983 MEIG1Q5JSS6 88 aa15.76■□□□□ 0.11
NKX2-1-205ENST00000546983 MRPL55Q7Z7F7 128 aaKnown RBP15.76■□□□□ 0.11
NKX2-1-205ENST00000546983 NKAPP1Q8N9T2 125 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms