RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 DNAH8Q96JB1 4490 aa11.34□□□□□ -0.59
TSFM-208ENST00000543727 LEPROTL1O95214 131 aa11.33□□□□□ -0.6
TSFM-208ENST00000543727 LINC00310P59036 64 aa11.33□□□□□ -0.6
TSFM-208ENST00000543727 C10orf25Q5T742 122 aa11.33□□□□□ -0.6
TSFM-208ENST00000543727 FAM19A2Q8N3H0 131 aa11.33□□□□□ -0.6
TSFM-208ENST00000543727 STPG4Q8N801 248 aa11.33□□□□□ -0.6
TSFM-208ENST00000543727 F8VRH5 84 aa11.32□□□□□ -0.6
TSFM-208ENST00000543727 RPL18AQ02543 176 aaKnown RBP11.32□□□□□ -0.6
TSFM-208ENST00000543727 GAGE2BQ13066 116 aa11.32□□□□□ -0.6
TSFM-208ENST00000543727 HSPB8Q9UJY1 196 aa11.32□□□□□ -0.6
TSFM-208ENST00000543727 CHTOPQ9Y3Y2 248 aaKnown RBP11.32□□□□□ -0.6
TSFM-208ENST00000543727 HIST1H2BKO60814 126 aa11.31□□□□□ -0.6
TSFM-208ENST00000543727 HIST1H2BJP06899 126 aa11.31□□□□□ -0.6
TSFM-208ENST00000543727 ZNF22P17026 224 aaPredicted RBP11.31□□□□□ -0.6
TSFM-208ENST00000543727 HIST1H2BOP23527 126 aa11.31□□□□□ -0.6
TSFM-208ENST00000543727 HIST1H2BBP33778 126 aa11.31□□□□□ -0.6
TSFM-208ENST00000543727 HIST1H2BDP58876 126 aa11.31□□□□□ -0.6
TSFM-208ENST00000543727 HIST1H2BCP62807 126 aa11.31□□□□□ -0.6
TSFM-208ENST00000543727 HIST2H2BEQ16778 126 aa11.31□□□□□ -0.6
TSFM-208ENST00000543727 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.31□□□□□ -0.6
TSFM-208ENST00000543727 C2orf82Q6UX34 121 aa11.31□□□□□ -0.6
TSFM-208ENST00000543727 COX7B2Q8TF08 81 aa11.31□□□□□ -0.6
TSFM-208ENST00000543727 HIST1H2BHQ93079 126 aa11.31□□□□□ -0.6
TSFM-208ENST00000543727 HIST1H2BNQ99877 126 aa11.31□□□□□ -0.6
TSFM-208ENST00000543727 HIST1H2BMQ99879 126 aa11.31□□□□□ -0.6
TSFM-208ENST00000543727 IGLV5-39A0A0G2JS06 123 aa11.3□□□□□ -0.6
TSFM-208ENST00000543727 NDUFC2-KCTD14E9PQ53 114 aa11.3□□□□□ -0.6
TSFM-208ENST00000543727 SPINK8P0C7L1 97 aa11.3□□□□□ -0.6
TSFM-208ENST00000543727 C7orf33Q8WU49 177 aa11.3□□□□□ -0.6
TSFM-208ENST00000543727 C11orf86A6NJI1 115 aa11.29□□□□□ -0.6
TSFM-208ENST00000543727 SFTA2Q6UW10 78 aa11.29□□□□□ -0.6
TSFM-208ENST00000543727 ATP6V1G1O75348 118 aa11.27□□□□□ -0.61
TSFM-208ENST00000543727 RPL37AP61513 92 aaKnown RBP11.27□□□□□ -0.61
TSFM-208ENST00000543727 TMEM170BQ5T4T1 132 aa11.27□□□□□ -0.61
TSFM-208ENST00000543727 Q6ZRP5 223 aa11.27□□□□□ -0.61
TSFM-208ENST00000543727 INAFM2P0DMQ5 153 aa11.26□□□□□ -0.61
TSFM-208ENST00000543727 NUPR1O60356 82 aa11.25□□□□□ -0.61
TSFM-208ENST00000543727 SRRM2Q9UQ35 2752 aaKnown RBP11.25□□□□□ -0.61
TSFM-208ENST00000543727 PLNP26678 52 aa11.24□□□□□ -0.61
TSFM-208ENST00000543727 KRTAP10-4P60372 401 aaPredicted RBP11.24□□□□□ -0.61
TSFM-208ENST00000543727 ODF1Q14990 250 aa11.24□□□□□ -0.61
TSFM-208ENST00000543727 C9orf116Q5BN46 136 aaPredicted RBP11.24□□□□□ -0.61
TSFM-208ENST00000543727 COA6Q5JTJ3 125 aaKnown RBP11.24□□□□□ -0.61
TSFM-208ENST00000543727 TMEM223A0PJW6 202 aa11.22□□□□□ -0.61
TSFM-208ENST00000543727 GAGE2EQ4V326 116 aa11.22□□□□□ -0.61
TSFM-208ENST00000543727 MAP1LC3CQ9BXW4 147 aa11.22□□□□□ -0.61
TSFM-208ENST00000543727 GAGE2DQ9UEU5 116 aa11.22□□□□□ -0.61
TSFM-208ENST00000543727 A0A1W2PNN7 141 aa11.21□□□□□ -0.61
TSFM-208ENST00000543727 FABP4P15090 132 aa11.21□□□□□ -0.61
TSFM-208ENST00000543727 PCLOQ9Y6V0 5065 aa11.2□□□□□ -0.62
TSFM-208ENST00000543727 H0Y8G0 127 aa11.2□□□□□ -0.62
TSFM-208ENST00000543727 VPS13BQ7Z7G8 4022 aa11.19□□□□□ -0.62
TSFM-208ENST00000543727 COX17Q14061 63 aa11.19□□□□□ -0.62
TSFM-208ENST00000543727 FAT1Q14517 4588 aa11.18□□□□□ -0.62
TSFM-208ENST00000543727 DPM2O94777 84 aa11.18□□□□□ -0.62
TSFM-208ENST00000543727 C9orf129Q5T035 196 aaKnown RBP11.17□□□□□ -0.62
TSFM-208ENST00000543727 PRR3P79522 188 aaKnown RBP11.16□□□□□ -0.62
TSFM-208ENST00000543727 ZNF625Q96I27 306 aaPredicted RBP11.16□□□□□ -0.62
TSFM-208ENST00000543727 IGKCP01834 107 aa11.15□□□□□ -0.62
TSFM-208ENST00000543727 ERG28Q9UKR5 140 aa11.15□□□□□ -0.62
TSFM-208ENST00000543727 ABCA13Q86UQ4 5058 aa11.14□□□□□ -0.63
TSFM-208ENST00000543727 SYS1-DBNDD2H3BUS1 97 aa11.14□□□□□ -0.63
TSFM-208ENST00000543727 HERVK_113P61574 105 aa11.14□□□□□ -0.63
TSFM-208ENST00000543727 FAM19A5Q7Z5A7 132 aaPredicted RBP11.14□□□□□ -0.63
TSFM-208ENST00000543727 FAM168BA1KXE4 195 aa11.13□□□□□ -0.63
TSFM-208ENST00000543727 M0QXV9 152 aa11.13□□□□□ -0.63
TSFM-208ENST00000543727 HERV-K104P63124 156 aa11.13□□□□□ -0.63
TSFM-208ENST00000543727 PLA2G2DQ9UNK4 145 aa11.13□□□□□ -0.63
TSFM-208ENST00000543727 LINC00587B1AMM8 73 aa11.12□□□□□ -0.63
TSFM-208ENST00000543727 PET117Q6UWS5 81 aa11.12□□□□□ -0.63
TSFM-208ENST00000543727 PLEKHB2Q96CS7 222 aa11.12□□□□□ -0.63
TSFM-208ENST00000543727 XAGE1AQ9HD64 81 aa11.12□□□□□ -0.63
TSFM-208ENST00000543727 TP73-AS1Q9UF72 201 aa11.12□□□□□ -0.63
TSFM-208ENST00000543727 LEPROTO15243 131 aa11.11□□□□□ -0.63
TSFM-208ENST00000543727 PHF5AQ7RTV0 110 aaKnown RBP11.11□□□□□ -0.63
TSFM-208ENST00000543727 LINC01545Q5VT33 79 aa11.1□□□□□ -0.63
TSFM-208ENST00000543727 KRTAP7-1Q8IUC3 87 aa11.1□□□□□ -0.63
TSFM-208ENST00000543727 MYMXA0A1B0GTQ4 84 aa11.09□□□□□ -0.63
TSFM-208ENST00000543727 PFN2P35080 140 aa11.09□□□□□ -0.63
TSFM-208ENST00000543727 LBHQ53QV2 105 aaPredicted RBP11.09□□□□□ -0.63
TSFM-208ENST00000543727 NDUFA12Q9UI09 145 aa11.09□□□□□ -0.63
TSFM-208ENST00000543727 FLG2Q5D862 2391 aaPredicted RBP11.09□□□□□ -0.63
TSFM-208ENST00000543727 NMUP48645 174 aa11.08□□□□□ -0.64
TSFM-208ENST00000543727 AKR1D1P51857 326 aa11.08□□□□□ -0.64
TSFM-208ENST00000543727 PMCHL2Q9BQD1 86 aa11.08□□□□□ -0.64
TSFM-208ENST00000543727 IGLV5-37A0A075B6J1 123 aa11.07□□□□□ -0.64
TSFM-208ENST00000543727 SERTAD4-AS1Q5TG53 156 aa11.07□□□□□ -0.64
TSFM-208ENST00000543727 PSORS1C2Q9UIG4 136 aa11.07□□□□□ -0.64
TSFM-208ENST00000543727 KRTAP29-1A8MX34 341 aaPredicted RBP11.06□□□□□ -0.64
TSFM-208ENST00000543727 J3QQQ9 107 aa11.06□□□□□ -0.64
TSFM-208ENST00000543727 OXTP01178 125 aa11.06□□□□□ -0.64
TSFM-208ENST00000543727 C3orf79P0CE67 100 aa11.06□□□□□ -0.64
TSFM-208ENST00000543727 HNRNPA3P51991 378 aaKnown RBP11.06□□□□□ -0.64
TSFM-208ENST00000543727 UBE2BP63146 152 aa11.06□□□□□ -0.64
TSFM-208ENST00000543727 SND1-IT1Q9HBX3 110 aa11.06□□□□□ -0.64
TSFM-208ENST00000543727 C22orf24Q9Y442 160 aa11.06□□□□□ -0.64
TSFM-208ENST00000543727 C20orf202A1L168 122 aa11.05□□□□□ -0.64
TSFM-208ENST00000543727 E9PLD3 99 aa11.05□□□□□ -0.64
TSFM-208ENST00000543727 SPINK6Q6UWN8 80 aa11.05□□□□□ -0.64
TSFM-208ENST00000543727 MRPL55Q7Z7F7 128 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms