RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 IGLV5-39A0A0G2JS06 123 aa3.54□□□□□ -1.84
SCARNA16.4-201ENST00000516956 A0A1B0GVY2 172 aa3.54□□□□□ -1.84
SCARNA16.4-201ENST00000516956 J3QQQ9 107 aa3.54□□□□□ -1.84
SCARNA16.4-201ENST00000516956 PFN2P35080 140 aa3.54□□□□□ -1.84
SCARNA16.4-201ENST00000516956 LINC00158P58513 81 aa3.54□□□□□ -1.84
SCARNA16.4-201ENST00000516956 KIAA0087Q14695 138 aa3.54□□□□□ -1.84
SCARNA16.4-201ENST00000516956 PLECQ15149 4684 aaKnown RBP3.54□□□□□ -1.84
SCARNA16.4-201ENST00000516956 MAJINQ3KP22 176 aa3.54□□□□□ -1.84
SCARNA16.4-201ENST00000516956 LINC01620Q4KN68 170 aa3.54□□□□□ -1.84
SCARNA16.4-201ENST00000516956 GAGE2EQ4V326 116 aa3.54□□□□□ -1.84
SCARNA16.4-201ENST00000516956 ATOH7Q8N100 152 aa3.54□□□□□ -1.84
SCARNA16.4-201ENST00000516956 ZNF625Q96I27 306 aaPredicted RBP3.54□□□□□ -1.84
SCARNA16.4-201ENST00000516956 GAGE2DQ9UEU5 116 aa3.54□□□□□ -1.84
SCARNA16.4-201ENST00000516956 NDUFA12Q9UI09 145 aa3.54□□□□□ -1.84
SCARNA16.4-201ENST00000516956 LYSTQ99698 3801 aa3.53□□□□□ -1.84
SCARNA16.4-201ENST00000516956 E9PLD3 99 aa3.53□□□□□ -1.84
SCARNA16.4-201ENST00000516956 COX17Q14061 63 aa3.53□□□□□ -1.84
SCARNA16.4-201ENST00000516956 SCGB1D4Q6XE38 83 aa3.53□□□□□ -1.84
SCARNA16.4-201ENST00000516956 STPG4Q8N801 248 aa3.53□□□□□ -1.84
SCARNA16.4-201ENST00000516956 MIEN1Q9BRT3 115 aa3.53□□□□□ -1.84
SCARNA16.4-201ENST00000516956 C6orf48Q9UBA6 75 aa3.53□□□□□ -1.84
SCARNA16.4-201ENST00000516956 ERG28Q9UKR5 140 aa3.53□□□□□ -1.84
SCARNA16.4-201ENST00000516956 A0A0U1RRA0 63 aa3.52□□□□□ -1.85
SCARNA16.4-201ENST00000516956 ZNF815PA8K554 130 aa3.52□□□□□ -1.85
SCARNA16.4-201ENST00000516956 NDUFC2-KCTD14E9PQ53 114 aa3.52□□□□□ -1.85
SCARNA16.4-201ENST00000516956 SLPIP03973 132 aa3.52□□□□□ -1.85
SCARNA16.4-201ENST00000516956 PTTG1IPP53801 180 aa3.52□□□□□ -1.85
SCARNA16.4-201ENST00000516956 KRTAP10-1P60331 282 aa3.52□□□□□ -1.85
SCARNA16.4-201ENST00000516956 S100A12P80511 92 aa3.52□□□□□ -1.85
SCARNA16.4-201ENST00000516956 C9orf116Q5BN46 136 aaPredicted RBP3.52□□□□□ -1.85
SCARNA16.4-201ENST00000516956 C10orf25Q5T742 122 aa3.52□□□□□ -1.85
SCARNA16.4-201ENST00000516956 SDIM1Q6ZPB5 146 aa3.52□□□□□ -1.85
SCARNA16.4-201ENST00000516956 C7orf33Q8WU49 177 aa3.52□□□□□ -1.85
SCARNA16.4-201ENST00000516956 COPS9Q8WXC6 57 aa3.52□□□□□ -1.85
SCARNA16.4-201ENST00000516956 VAMP8Q9BV40 100 aa3.52□□□□□ -1.85
SCARNA16.4-201ENST00000516956 A0A096LNI7 61 aa3.51□□□□□ -1.85
SCARNA16.4-201ENST00000516956 TLX1NBP0CAT3 122 aa3.51□□□□□ -1.85
SCARNA16.4-201ENST00000516956 RPL24P83731 157 aaKnown RBP3.51□□□□□ -1.85
SCARNA16.4-201ENST00000516956 JOSD1Q15040 202 aaPredicted RBP3.51□□□□□ -1.85
SCARNA16.4-201ENST00000516956 NKAPP1Q8N9T2 125 aa3.51□□□□□ -1.85
SCARNA16.4-201ENST00000516956 TMEM238C9JI98 176 aa3.5□□□□□ -1.85
SCARNA16.4-201ENST00000516956 FAM229AH3BQW9 127 aa3.5□□□□□ -1.85
SCARNA16.4-201ENST00000516956 CHTF8P0CG12 524 aa3.5□□□□□ -1.85
SCARNA16.4-201ENST00000516956 SMIM13P0DJ93 91 aa3.5□□□□□ -1.85
SCARNA16.4-201ENST00000516956 LBHQ53QV2 105 aaPredicted RBP3.5□□□□□ -1.85
SCARNA16.4-201ENST00000516956 Q6ZRP5 223 aa3.5□□□□□ -1.85
SCARNA16.4-201ENST00000516956 XAGE1AQ9HD64 81 aa3.5□□□□□ -1.85
SCARNA16.4-201ENST00000516956 PAM16Q9Y3D7 125 aa3.5□□□□□ -1.85
SCARNA16.4-201ENST00000516956 A0A087WYN8 130 aa3.49□□□□□ -1.85
SCARNA16.4-201ENST00000516956 CDK2AP2O75956 126 aa3.49□□□□□ -1.85
SCARNA16.4-201ENST00000516956 TSPEAR-AS2P59090 65 aa3.49□□□□□ -1.85
SCARNA16.4-201ENST00000516956 UBE2BP63146 152 aa3.49□□□□□ -1.85
SCARNA16.4-201ENST00000516956 SRSF9Q13242 221 aaKnown RBP eCLIP3.49□□□□□ -1.85
SCARNA16.4-201ENST00000516956 SPATA45Q537H7 98 aa3.49□□□□□ -1.85
SCARNA16.4-201ENST00000516956 ANKRD39Q53RE8 183 aa3.49□□□□□ -1.85
SCARNA16.4-201ENST00000516956 FAM19A5Q7Z5A7 132 aaPredicted RBP3.49□□□□□ -1.85
SCARNA16.4-201ENST00000516956 SPACA4Q8TDM5 124 aa3.49□□□□□ -1.85
SCARNA16.4-201ENST00000516956 VPS13DQ5THJ4 4388 aa3.49□□□□□ -1.85
SCARNA16.4-201ENST00000516956 IGKV2D-26A0A0A0MRZ7 120 aa3.48□□□□□ -1.85
SCARNA16.4-201ENST00000516956 A0A0J9YXY3 114 aa3.48□□□□□ -1.85
SCARNA16.4-201ENST00000516956 TIMM17BO60830 172 aa3.48□□□□□ -1.85
SCARNA16.4-201ENST00000516956 SLC25A34Q6PIV7 304 aa3.48□□□□□ -1.85
SCARNA16.4-201ENST00000516956 SCXQ7RTU7 201 aa3.48□□□□□ -1.85
SCARNA16.4-201ENST00000516956 MIR7-3HGQ8N6C7 128 aa3.48□□□□□ -1.85
SCARNA16.4-201ENST00000516956 CIRBP-AS1Q8TBR5 109 aa3.48□□□□□ -1.85
SCARNA16.4-201ENST00000516956 SND1-IT1Q9HBX3 110 aa3.48□□□□□ -1.85
SCARNA16.4-201ENST00000516956 FAM30AQ9NZY2 134 aa3.48□□□□□ -1.85
SCARNA16.4-201ENST00000516956 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.48□□□□□ -1.85
SCARNA16.4-201ENST00000516956 KMT2CQ8NEZ4 4911 aaKnown RBP3.48□□□□□ -1.85
SCARNA16.4-201ENST00000516956 M0QXV9 152 aa3.47□□□□□ -1.85
SCARNA16.4-201ENST00000516956 SMR3BP02814 79 aaPredicted RBP3.47□□□□□ -1.85
SCARNA16.4-201ENST00000516956 PLA2G1BP04054 148 aaKnown RBP3.47□□□□□ -1.85
SCARNA16.4-201ENST00000516956 NPC2P61916 151 aa3.47□□□□□ -1.85
SCARNA16.4-201ENST00000516956 HAMPP81172 84 aa3.47□□□□□ -1.85
SCARNA16.4-201ENST00000516956 Q6ZVH6 145 aa3.47□□□□□ -1.85
SCARNA16.4-201ENST00000516956 PCP2Q8IVA1 136 aa3.47□□□□□ -1.85
SCARNA16.4-201ENST00000516956 BOD1L2Q8IYS8 172 aa3.47□□□□□ -1.85
SCARNA16.4-201ENST00000516956 C14orf144Q96I85 54 aa3.47□□□□□ -1.85
SCARNA16.4-201ENST00000516956 HIST1H4GQ99525 98 aa3.47□□□□□ -1.85
SCARNA16.4-201ENST00000516956 PLAC8Q9NZF1 115 aa3.47□□□□□ -1.85
SCARNA16.4-201ENST00000516956 CBY1Q9Y3M2 126 aa3.47□□□□□ -1.85
SCARNA16.4-201ENST00000516956 DNAH1Q9P2D7 4330 aa3.47□□□□□ -1.85
SCARNA16.4-201ENST00000516956 COX8AP10176 69 aa3.46□□□□□ -1.86
SCARNA16.4-201ENST00000516956 IFITM1P13164 125 aa3.46□□□□□ -1.86
SCARNA16.4-201ENST00000516956 PYY3Q5JQD4 70 aa3.46□□□□□ -1.86
SCARNA16.4-201ENST00000516956 S100A7L2Q5SY68 101 aa3.46□□□□□ -1.86
SCARNA16.4-201ENST00000516956 C9orf129Q5T035 196 aaKnown RBP3.46□□□□□ -1.86
SCARNA16.4-201ENST00000516956 Q6ZSA8 131 aa3.46□□□□□ -1.86
SCARNA16.4-201ENST00000516956 LINC00528Q8N1L1 170 aa3.46□□□□□ -1.86
SCARNA16.4-201ENST00000516956 DAND5Q8N907 189 aa3.46□□□□□ -1.86
SCARNA16.4-201ENST00000516956 OR13C6PQ8NH95 151 aa3.46□□□□□ -1.86
SCARNA16.4-201ENST00000516956 TTTY13Q9BZ97 58 aa3.46□□□□□ -1.86
SCARNA16.4-201ENST00000516956 PLA2G2DQ9UNK4 145 aa3.46□□□□□ -1.86
SCARNA16.4-201ENST00000516956 C22orf24Q9Y442 160 aa3.46□□□□□ -1.86
SCARNA16.4-201ENST00000516956 KMT2AQ03164 3969 aa3.45□□□□□ -1.86
SCARNA16.4-201ENST00000516956 A0A1W2PNN7 141 aa3.45□□□□□ -1.86
SCARNA16.4-201ENST00000516956 FAM168BA1KXE4 195 aa3.45□□□□□ -1.86
SCARNA16.4-201ENST00000516956 GAGE10A6NGK3 116 aa3.45□□□□□ -1.86
SCARNA16.4-201ENST00000516956 EPM2AB3EWF7 344 aa3.45□□□□□ -1.86
SCARNA16.4-201ENST00000516956 PANO1I0J062 215 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms