RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 LOC107984640A0A0U1RRK4 108 aa10.85□□□□□ -0.67
USP39-211ENST00000465282 ODF1Q14990 250 aa10.84□□□□□ -0.67
USP39-211ENST00000465282 TMEM170BQ5T4T1 132 aa10.84□□□□□ -0.67
USP39-211ENST00000465282 UNQ6190/PRO20217Q6UXQ8 127 aa10.84□□□□□ -0.67
USP39-211ENST00000465282 COX7B2Q8TF08 81 aa10.84□□□□□ -0.67
USP39-211ENST00000465282 IGLV5-39A0A0G2JS06 123 aa10.83□□□□□ -0.68
USP39-211ENST00000465282 SPINK8P0C7L1 97 aa10.83□□□□□ -0.68
USP39-211ENST00000465282 TLX1NBP0CAT3 122 aa10.83□□□□□ -0.68
USP39-211ENST00000465282 PLNP26678 52 aa10.83□□□□□ -0.68
USP39-211ENST00000465282 C10orf25Q5T742 122 aa10.82□□□□□ -0.68
USP39-211ENST00000465282 C2orf82Q6UX34 121 aa10.82□□□□□ -0.68
USP39-211ENST00000465282 SCXQ7RTU7 201 aa10.82□□□□□ -0.68
USP39-211ENST00000465282 CIRBP-AS1Q8TBR5 109 aa10.82□□□□□ -0.68
USP39-211ENST00000465282 SPACA4Q8TDM5 124 aa10.82□□□□□ -0.68
USP39-211ENST00000465282 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.82□□□□□ -0.68
USP39-211ENST00000465282 RYR1P21817 5038 aa10.82□□□□□ -0.68
USP39-211ENST00000465282 H0Y8G0 127 aa10.81□□□□□ -0.68
USP39-211ENST00000465282 DPH3Q96FX2 82 aa10.81□□□□□ -0.68
USP39-211ENST00000465282 C6orf48Q9UBA6 75 aa10.81□□□□□ -0.68
USP39-211ENST00000465282 A0A096LNI7 61 aa10.8□□□□□ -0.68
USP39-211ENST00000465282 PTTG1IPP53801 180 aa10.8□□□□□ -0.68
USP39-211ENST00000465282 SFTA2Q6UW10 78 aa10.8□□□□□ -0.68
USP39-211ENST00000465282 IGKV2-24A0A0C4DH68 120 aa10.79□□□□□ -0.68
USP39-211ENST00000465282 TMEM223A0PJW6 202 aa10.79□□□□□ -0.68
USP39-211ENST00000465282 SYS1-DBNDD2H3BUS1 97 aa10.79□□□□□ -0.68
USP39-211ENST00000465282 DPM2O94777 84 aa10.79□□□□□ -0.68
USP39-211ENST00000465282 Q8N1X5 172 aa10.79□□□□□ -0.68
USP39-211ENST00000465282 PANO1I0J062 215 aa10.78□□□□□ -0.68
USP39-211ENST00000465282 CHTF8P0CG12 524 aa10.78□□□□□ -0.68
USP39-211ENST00000465282 MAJINQ3KP22 176 aa10.78□□□□□ -0.68
USP39-211ENST00000465282 PLAC8Q9NZF1 115 aa10.78□□□□□ -0.68
USP39-211ENST00000465282 A0A087WYN8 130 aa10.77□□□□□ -0.69
USP39-211ENST00000465282 NDUFC2-KCTD14E9PQ53 114 aa10.77□□□□□ -0.69
USP39-211ENST00000465282 S100A6P06703 90 aa10.77□□□□□ -0.69
USP39-211ENST00000465282 HAMPP81172 84 aa10.77□□□□□ -0.69
USP39-211ENST00000465282 RPL18AQ02543 176 aaKnown RBP10.77□□□□□ -0.69
USP39-211ENST00000465282 GAGE2BQ13066 116 aa10.77□□□□□ -0.69
USP39-211ENST00000465282 PET117Q6UWS5 81 aa10.77□□□□□ -0.69
USP39-211ENST00000465282 IGKCP01834 107 aa10.76□□□□□ -0.69
USP39-211ENST00000465282 FAM229AH3BQW9 127 aa10.75□□□□□ -0.69
USP39-211ENST00000465282 STPG4Q8N801 248 aa10.75□□□□□ -0.69
USP39-211ENST00000465282 LINC01545Q5VT33 79 aa10.74□□□□□ -0.69
USP39-211ENST00000465282 Q6ZRP5 223 aa10.74□□□□□ -0.69
USP39-211ENST00000465282 SMR3BP02814 79 aaPredicted RBP10.73□□□□□ -0.69
USP39-211ENST00000465282 C3orf79P0CE67 100 aa10.73□□□□□ -0.69
USP39-211ENST00000465282 HERVK_113P61574 105 aa10.73□□□□□ -0.69
USP39-211ENST00000465282 C9orf116Q5BN46 136 aaPredicted RBP10.73□□□□□ -0.69
USP39-211ENST00000465282 EPM2AB3EWF7 344 aa10.72□□□□□ -0.69
USP39-211ENST00000465282 S100A2P29034 98 aa10.72□□□□□ -0.69
USP39-211ENST00000465282 AKR1D1P51857 326 aa10.72□□□□□ -0.69
USP39-211ENST00000465282 HIST3H2BBQ8N257 126 aa10.72□□□□□ -0.69
USP39-211ENST00000465282 PMCHL2Q9BQD1 86 aa10.72□□□□□ -0.69
USP39-211ENST00000465282 COX17Q14061 63 aa10.71□□□□□ -0.69
USP39-211ENST00000465282 C20orf202A1L168 122 aa10.7□□□□□ -0.7
USP39-211ENST00000465282 KRTDAPP60985 99 aa10.7□□□□□ -0.7
USP39-211ENST00000465282 GAGE2EQ4V326 116 aa10.7□□□□□ -0.7
USP39-211ENST00000465282 LINC00528Q8N1L1 170 aa10.7□□□□□ -0.7
USP39-211ENST00000465282 PLEKHB2Q96CS7 222 aa10.7□□□□□ -0.7
USP39-211ENST00000465282 ZNF625Q96I27 306 aaPredicted RBP10.7□□□□□ -0.7
USP39-211ENST00000465282 GAGE2DQ9UEU5 116 aa10.7□□□□□ -0.7
USP39-211ENST00000465282 LEPROTO15243 131 aa10.69□□□□□ -0.7
USP39-211ENST00000465282 PLA2G1BP04054 148 aaKnown RBP10.68□□□□□ -0.7
USP39-211ENST00000465282 HERV-K104P63124 156 aa10.68□□□□□ -0.7
USP39-211ENST00000465282 Q5VSD8 79 aa10.68□□□□□ -0.7
USP39-211ENST00000465282 HIST1H2BLQ99880 126 aa10.68□□□□□ -0.7
USP39-211ENST00000465282 FAT1Q14517 4588 aa10.67□□□□□ -0.7
USP39-211ENST00000465282 LINC00587B1AMM8 73 aa10.67□□□□□ -0.7
USP39-211ENST00000465282 C7orf33Q8WU49 177 aa10.67□□□□□ -0.7
USP39-211ENST00000465282 ERG28Q9UKR5 140 aa10.67□□□□□ -0.7
USP39-211ENST00000465282 MYMXA0A1B0GTQ4 84 aa10.66□□□□□ -0.7
USP39-211ENST00000465282 A0A1W2PNN7 141 aa10.66□□□□□ -0.7
USP39-211ENST00000465282 C5orf52A6NGY3 159 aa10.66□□□□□ -0.7
USP39-211ENST00000465282 SNRPEP62304 92 aaKnown RBP10.66□□□□□ -0.7
USP39-211ENST00000465282 NDUFA12Q9UI09 145 aa10.66□□□□□ -0.7
USP39-211ENST00000465282 SRRM2Q9UQ35 2752 aaKnown RBP10.65□□□□□ -0.7
USP39-211ENST00000465282 E9PLD3 99 aa10.65□□□□□ -0.7
USP39-211ENST00000465282 J3QQQ9 107 aa10.65□□□□□ -0.7
USP39-211ENST00000465282 NMUP48645 174 aa10.65□□□□□ -0.7
USP39-211ENST00000465282 C9orf129Q5T035 196 aaKnown RBP10.65□□□□□ -0.7
USP39-211ENST00000465282 LGALS3P17931 250 aaKnown RBP10.63□□□□□ -0.71
USP39-211ENST00000465282 PFN2P35080 140 aa10.63□□□□□ -0.71
USP39-211ENST00000465282 ABCA13Q86UQ4 5058 aa10.62□□□□□ -0.71
USP39-211ENST00000465282 VPS13BQ7Z7G8 4022 aa10.62□□□□□ -0.71
USP39-211ENST00000465282 XAGE1AQ9HD64 81 aa10.62□□□□□ -0.71
USP39-211ENST00000465282 PLA2G2DQ9UNK4 145 aa10.62□□□□□ -0.71
USP39-211ENST00000465282 TSPEAR-AS2P59090 65 aa10.61□□□□□ -0.71
USP39-211ENST00000465282 RPL37AP61513 92 aaKnown RBP10.61□□□□□ -0.71
USP39-211ENST00000465282 FAM168BA1KXE4 195 aa10.6□□□□□ -0.71
USP39-211ENST00000465282 LINC00158P58513 81 aa10.6□□□□□ -0.71
USP39-211ENST00000465282 KRTAP4-5Q9BYR2 181 aa10.6□□□□□ -0.71
USP39-211ENST00000465282 MEIG1Q5JSS6 88 aa10.59□□□□□ -0.71
USP39-211ENST00000465282 FAM19A5Q7Z5A7 132 aaPredicted RBP10.59□□□□□ -0.71
USP39-211ENST00000465282 SND1-IT1Q9HBX3 110 aa10.59□□□□□ -0.71
USP39-211ENST00000465282 TP73-AS1Q9UF72 201 aa10.59□□□□□ -0.71
USP39-211ENST00000465282 M0QXV9 152 aa10.57□□□□□ -0.72
USP39-211ENST00000465282 LBHQ53QV2 105 aaPredicted RBP10.57□□□□□ -0.72
USP39-211ENST00000465282 KRTAP7-1Q8IUC3 87 aa10.57□□□□□ -0.72
USP39-211ENST00000465282 SMIM13P0DJ93 91 aa10.56□□□□□ -0.72
USP39-211ENST00000465282 KRTAP10-4P60372 401 aaPredicted RBP10.56□□□□□ -0.72
USP39-211ENST00000465282 PHF5AQ7RTV0 110 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms