RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 LOC107984640A0A0U1RRK4 108 aa8.05□□□□□ -1.12
HDAC4-206ENST00000460235 ATOH7Q8N100 152 aa8.05□□□□□ -1.12
HDAC4-206ENST00000460235 VAMP8Q9BV40 100 aa8.05□□□□□ -1.12
HDAC4-206ENST00000460235 DNAH6Q9C0G6 4158 aa8.05□□□□□ -1.12
HDAC4-206ENST00000460235 UNQ6190/PRO20217Q6UXQ8 127 aa8.04□□□□□ -1.12
HDAC4-206ENST00000460235 Q6ZRU5 148 aa8.04□□□□□ -1.12
HDAC4-206ENST00000460235 LYSTQ99698 3801 aa8.04□□□□□ -1.12
HDAC4-206ENST00000460235 LINC00526Q96FQ7 95 aa8.03□□□□□ -1.12
HDAC4-206ENST00000460235 TLX1NBP0CAT3 122 aa8.02□□□□□ -1.13
HDAC4-206ENST00000460235 MEIG1Q5JSS6 88 aa8.02□□□□□ -1.13
HDAC4-206ENST00000460235 C2orf82Q6UX34 121 aa8.02□□□□□ -1.13
HDAC4-206ENST00000460235 A0A1B0GVY2 172 aa8.01□□□□□ -1.13
HDAC4-206ENST00000460235 ZNF815PA8K554 130 aa8.01□□□□□ -1.13
HDAC4-206ENST00000460235 C16orf90A8MZG2 172 aa8.01□□□□□ -1.13
HDAC4-206ENST00000460235 NDUFC2-KCTD14E9PQ53 114 aa8.01□□□□□ -1.13
HDAC4-206ENST00000460235 COPS9Q8WXC6 57 aa8.01□□□□□ -1.13
HDAC4-206ENST00000460235 ZNF625Q96I27 306 aaPredicted RBP8.01□□□□□ -1.13
HDAC4-206ENST00000460235 KMT2AQ03164 3969 aa8□□□□□ -1.13
HDAC4-206ENST00000460235 SLPIP03973 132 aa8□□□□□ -1.13
HDAC4-206ENST00000460235 SMIM6P0DI80 62 aa8□□□□□ -1.13
HDAC4-206ENST00000460235 PYY3Q5JQD4 70 aa8□□□□□ -1.13
HDAC4-206ENST00000460235 SCGB1D4Q6XE38 83 aa8□□□□□ -1.13
HDAC4-206ENST00000460235 DPH3Q96FX2 82 aa8□□□□□ -1.13
HDAC4-206ENST00000460235 C6orf48Q9UBA6 75 aa8□□□□□ -1.13
HDAC4-206ENST00000460235 ERG28Q9UKR5 140 aa8□□□□□ -1.13
HDAC4-206ENST00000460235 LINC00158P58513 81 aa7.99□□□□□ -1.13
HDAC4-206ENST00000460235 KRTAP10-2P60368 255 aa7.99□□□□□ -1.13
HDAC4-206ENST00000460235 SPATA45Q537H7 98 aa7.99□□□□□ -1.13
HDAC4-206ENST00000460235 ANKRD39Q53RE8 183 aa7.99□□□□□ -1.13
HDAC4-206ENST00000460235 TIMM17BO60830 172 aa7.98□□□□□ -1.13
HDAC4-206ENST00000460235 RPL18AQ02543 176 aaKnown RBP7.98□□□□□ -1.13
HDAC4-206ENST00000460235 C10orf25Q5T742 122 aa7.98□□□□□ -1.13
HDAC4-206ENST00000460235 PAM16Q9Y3D7 125 aa7.98□□□□□ -1.13
HDAC4-206ENST00000460235 TMEM238C9JI98 176 aa7.97□□□□□ -1.13
HDAC4-206ENST00000460235 PFN2P35080 140 aa7.97□□□□□ -1.13
HDAC4-206ENST00000460235 SDIM1Q6ZPB5 146 aa7.97□□□□□ -1.13
HDAC4-206ENST00000460235 MIEN1Q9BRT3 115 aa7.97□□□□□ -1.13
HDAC4-206ENST00000460235 IGKV2D-26A0A0A0MRZ7 120 aa7.96□□□□□ -1.14
HDAC4-206ENST00000460235 DLEU1O43261 78 aa7.96□□□□□ -1.14
HDAC4-206ENST00000460235 COX8AP10176 69 aa7.96□□□□□ -1.14
HDAC4-206ENST00000460235 TSPEAR-AS2P59090 65 aa7.96□□□□□ -1.14
HDAC4-206ENST00000460235 GAGE2BQ13066 116 aa7.96□□□□□ -1.14
HDAC4-206ENST00000460235 Q6ZVH6 145 aa7.96□□□□□ -1.14
HDAC4-206ENST00000460235 SACSQ9NZJ4 4579 aa7.95□□□□□ -1.14
HDAC4-206ENST00000460235 A0A0J9YXY3 114 aa7.95□□□□□ -1.14
HDAC4-206ENST00000460235 LOC105371267A0A1B0GV96 52 aa7.95□□□□□ -1.14
HDAC4-206ENST00000460235 PTTG1IPP53801 180 aa7.95□□□□□ -1.14
HDAC4-206ENST00000460235 MAJINQ3KP22 176 aa7.95□□□□□ -1.14
HDAC4-206ENST00000460235 SLC25A34Q6PIV7 304 aa7.95□□□□□ -1.14
HDAC4-206ENST00000460235 RPL24P83731 157 aaKnown RBP7.94□□□□□ -1.14
HDAC4-206ENST00000460235 GAGE2EQ4V326 116 aa7.94□□□□□ -1.14
HDAC4-206ENST00000460235 C9orf116Q5BN46 136 aaPredicted RBP7.94□□□□□ -1.14
HDAC4-206ENST00000460235 GAGE2DQ9UEU5 116 aa7.94□□□□□ -1.14
HDAC4-206ENST00000460235 IGKV2-24A0A0C4DH68 120 aa7.93□□□□□ -1.14
HDAC4-206ENST00000460235 SMIM13P0DJ93 91 aa7.93□□□□□ -1.14
HDAC4-206ENST00000460235 PCP2Q8IVA1 136 aa7.93□□□□□ -1.14
HDAC4-206ENST00000460235 BOD1L2Q8IYS8 172 aa7.93□□□□□ -1.14
HDAC4-206ENST00000460235 IFITM1P13164 125 aa7.92□□□□□ -1.14
HDAC4-206ENST00000460235 SRSF9Q13242 221 aaKnown RBP eCLIP7.92□□□□□ -1.14
HDAC4-206ENST00000460235 Q6ZRP5 223 aa7.92□□□□□ -1.14
HDAC4-206ENST00000460235 KMT2CQ8NEZ4 4911 aaKnown RBP7.92□□□□□ -1.14
HDAC4-206ENST00000460235 A0A096LNI7 61 aa7.91□□□□□ -1.14
HDAC4-206ENST00000460235 LINC01620Q4KN68 170 aa7.91□□□□□ -1.14
HDAC4-206ENST00000460235 MIR7-3HGQ8N6C7 128 aa7.91□□□□□ -1.14
HDAC4-206ENST00000460235 SND1-IT1Q9HBX3 110 aa7.91□□□□□ -1.14
HDAC4-206ENST00000460235 A0A0U1RRA0 63 aa7.9□□□□□ -1.14
HDAC4-206ENST00000460235 KRTAP10-1P60331 282 aa7.9□□□□□ -1.14
HDAC4-206ENST00000460235 SPACA4Q8TDM5 124 aa7.9□□□□□ -1.14
HDAC4-206ENST00000460235 C14orf144Q96I85 54 aa7.9□□□□□ -1.14
HDAC4-206ENST00000460235 PPDPFQ9H3Y8 114 aa7.9□□□□□ -1.14
HDAC4-206ENST00000460235 UQCR10Q9UDW1 63 aa7.9□□□□□ -1.14
HDAC4-206ENST00000460235 PLA2G2DQ9UNK4 145 aa7.9□□□□□ -1.14
HDAC4-206ENST00000460235 FUSP35637 526 aaKnown RBP eCLIP7.89□□□□□ -1.15
HDAC4-206ENST00000460235 LBHQ53QV2 105 aaPredicted RBP7.89□□□□□ -1.15
HDAC4-206ENST00000460235 Q6ZSA8 131 aa7.89□□□□□ -1.15
HDAC4-206ENST00000460235 SPANXDQ9BXN6 97 aa7.89□□□□□ -1.15
HDAC4-206ENST00000460235 TTTY13Q9BZ97 58 aa7.89□□□□□ -1.15
HDAC4-206ENST00000460235 SPANXB1Q9NS25 103 aaPredicted RBP7.89□□□□□ -1.15
HDAC4-206ENST00000460235 SPANXCQ9NY87 97 aa7.89□□□□□ -1.15
HDAC4-206ENST00000460235 HIGD1BQ9P298 99 aa7.89□□□□□ -1.15
HDAC4-206ENST00000460235 LOC107984156A0A0G2JMH3 177 aa7.88□□□□□ -1.15
HDAC4-206ENST00000460235 TSTD3H0UI37 97 aa7.88□□□□□ -1.15
HDAC4-206ENST00000460235 ARL17AQ8IVW1 177 aa7.88□□□□□ -1.15
HDAC4-206ENST00000460235 NKAPP1Q8N9T2 125 aa7.88□□□□□ -1.15
HDAC4-206ENST00000460235 C12orf57Q99622 126 aa7.88□□□□□ -1.15
HDAC4-206ENST00000460235 XAGE1AQ9HD64 81 aa7.88□□□□□ -1.15
HDAC4-206ENST00000460235 CBY1Q9Y3M2 126 aa7.88□□□□□ -1.15
HDAC4-206ENST00000460235 RYR2Q92736 4967 aa7.87□□□□□ -1.15
HDAC4-206ENST00000460235 HIST1H4GQ99525 98 aa7.87□□□□□ -1.15
HDAC4-206ENST00000460235 PLAC8Q9NZF1 115 aa7.87□□□□□ -1.15
HDAC4-206ENST00000460235 A0A087WYN8 130 aa7.86□□□□□ -1.15
HDAC4-206ENST00000460235 CDK2AP2O75956 126 aa7.86□□□□□ -1.15
HDAC4-206ENST00000460235 NDUFC2O95298 119 aa7.86□□□□□ -1.15
HDAC4-206ENST00000460235 TAL2Q16559 108 aa7.86□□□□□ -1.15
HDAC4-206ENST00000460235 LINC00518Q8N0U6 118 aa7.86□□□□□ -1.15
HDAC4-206ENST00000460235 C7orf33Q8WU49 177 aa7.86□□□□□ -1.15
HDAC4-206ENST00000460235 TP73-AS1Q9UF72 201 aa7.86□□□□□ -1.15
HDAC4-206ENST00000460235 HYDINQ4G0P3 5121 aa7.86□□□□□ -1.15
HDAC4-206ENST00000460235 CHTF8P0CG12 524 aa7.85□□□□□ -1.15
HDAC4-206ENST00000460235 C9orf129Q5T035 196 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms