RNA–Protein interactions for RNA: ENST00000424894.1

PRDM1-204, Transcript of PR/SET domain 1, humanhuman

TSL 5

Gene PRDM1, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-204ENST00000424894 DMBT1Q9UGM3 2413 aaPredicted RBP4.47□□□□□ -1.69
PRDM1-204ENST00000424894 ZNF561-AS1K7EIQ3 104 aa4.47□□□□□ -1.69
PRDM1-204ENST00000424894 SPAG11BQ08648 103 aa4.47□□□□□ -1.69
PRDM1-204ENST00000424894 SYCNQ0VAF6 134 aa4.47□□□□□ -1.69
PRDM1-204ENST00000424894 GAGE2BQ13066 116 aa4.47□□□□□ -1.69
PRDM1-204ENST00000424894 LINC00242Q5T6M2 205 aa4.47□□□□□ -1.69
PRDM1-204ENST00000424894 C2orf66Q6UXQ4 117 aa4.47□□□□□ -1.69
PRDM1-204ENST00000424894 SPANXA1Q9NS26 97 aa4.47□□□□□ -1.69
PRDM1-204ENST00000424894 CSDC2Q9Y534 153 aaKnown RBP4.47□□□□□ -1.69
PRDM1-204ENST00000424894 IGHV3OR16-9A0A0B4J2B5 98 aa4.46□□□□□ -1.7
PRDM1-204ENST00000424894 A0A1W2PNN7 141 aa4.46□□□□□ -1.7
PRDM1-204ENST00000424894 FAM168BA1KXE4 195 aa4.46□□□□□ -1.7
PRDM1-204ENST00000424894 RPL18AQ02543 176 aaKnown RBP4.46□□□□□ -1.7
PRDM1-204ENST00000424894 PMCHL1Q16048 86 aa4.46□□□□□ -1.7
PRDM1-204ENST00000424894 C9orf116Q5BN46 136 aaPredicted RBP4.46□□□□□ -1.7
PRDM1-204ENST00000424894 PDZD11Q5EBL8 140 aa4.46□□□□□ -1.7
PRDM1-204ENST00000424894 C2orf82Q6UX34 121 aa4.46□□□□□ -1.7
PRDM1-204ENST00000424894 UNQ6190/PRO20217Q6UXQ8 127 aa4.46□□□□□ -1.7
PRDM1-204ENST00000424894 CAMK2N2Q96S95 79 aa4.46□□□□□ -1.7
PRDM1-204ENST00000424894 MRPL18Q9H0U6 180 aaKnown RBP4.46□□□□□ -1.7
PRDM1-204ENST00000424894 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.45□□□□□ -1.7
PRDM1-204ENST00000424894 UBE2D1P51668 147 aa4.45□□□□□ -1.7
PRDM1-204ENST00000424894 MRPS36P82909 103 aaKnown RBP4.45□□□□□ -1.7
PRDM1-204ENST00000424894 KRTAP11-1Q8IUC1 163 aa4.45□□□□□ -1.7
PRDM1-204ENST00000424894 URB1-AS1Q96HZ7 61 aa4.45□□□□□ -1.7
PRDM1-204ENST00000424894 TMEM141Q96I45 108 aa4.45□□□□□ -1.7
PRDM1-204ENST00000424894 PLAC8Q9NZF1 115 aa4.45□□□□□ -1.7
PRDM1-204ENST00000424894 C6orf48Q9UBA6 75 aa4.45□□□□□ -1.7
PRDM1-204ENST00000424894 LAMTOR2Q9Y2Q5 125 aa4.45□□□□□ -1.7
PRDM1-204ENST00000424894 IGIPA6NJ69 53 aa4.44□□□□□ -1.7
PRDM1-204ENST00000424894 J3QL48 77 aa4.44□□□□□ -1.7
PRDM1-204ENST00000424894 SCGB1D1O95968 90 aa4.44□□□□□ -1.7
PRDM1-204ENST00000424894 KIAA0087Q14695 138 aa4.44□□□□□ -1.7
PRDM1-204ENST00000424894 PHF5AQ7RTV0 110 aaKnown RBP4.44□□□□□ -1.7
PRDM1-204ENST00000424894 UQCR10Q9UDW1 63 aa4.44□□□□□ -1.7
PRDM1-204ENST00000424894 CYSLTR1Q9Y271 337 aa4.44□□□□□ -1.7
PRDM1-204ENST00000424894 TRAV9-1A0A075B6T8 112 aa4.43□□□□□ -1.7
PRDM1-204ENST00000424894 A0A096LNJ9 63 aa4.43□□□□□ -1.7
PRDM1-204ENST00000424894 KRTAP7-1Q8IUC3 87 aa4.43□□□□□ -1.7
PRDM1-204ENST00000424894 AMELXQ99217 191 aa4.43□□□□□ -1.7
PRDM1-204ENST00000424894 GNB1LQ9BYB4 327 aa4.43□□□□□ -1.7
PRDM1-204ENST00000424894 TOMM7Q9P0U1 55 aa4.43□□□□□ -1.7
PRDM1-204ENST00000424894 CDKN2A-AS1Q9UH64 79 aa4.43□□□□□ -1.7
PRDM1-204ENST00000424894 PYGO1Q9Y3Y4 419 aa4.43□□□□□ -1.7
PRDM1-204ENST00000424894 A0A087WZ39 114 aa4.42□□□□□ -1.7
PRDM1-204ENST00000424894 LOC107984640A0A0U1RRK4 108 aa4.42□□□□□ -1.7
PRDM1-204ENST00000424894 APOMO95445 188 aa4.42□□□□□ -1.7
PRDM1-204ENST00000424894 IGLC3P0DOY3 106 aa4.42□□□□□ -1.7
PRDM1-204ENST00000424894 CKS1BP61024 79 aa4.42□□□□□ -1.7
PRDM1-204ENST00000424894 PRR3P79522 188 aaKnown RBP4.42□□□□□ -1.7
PRDM1-204ENST00000424894 SMAGPQ0VAQ4 97 aa4.42□□□□□ -1.7
PRDM1-204ENST00000424894 GAGE2EQ4V326 116 aa4.42□□□□□ -1.7
PRDM1-204ENST00000424894 ORMDL2Q53FV1 153 aa4.42□□□□□ -1.7
PRDM1-204ENST00000424894 Q6ZRP5 223 aa4.42□□□□□ -1.7
PRDM1-204ENST00000424894 FAM19A5Q7Z5A7 132 aaPredicted RBP4.42□□□□□ -1.7
PRDM1-204ENST00000424894 TOMM6Q96B49 74 aa4.42□□□□□ -1.7
PRDM1-204ENST00000424894 SCGB3A1Q96QR1 104 aa4.42□□□□□ -1.7
PRDM1-204ENST00000424894 SIGMAR1Q99720 223 aa4.42□□□□□ -1.7
PRDM1-204ENST00000424894 NXT2Q9NPJ8 142 aaKnown RBP4.42□□□□□ -1.7
PRDM1-204ENST00000424894 GAGE2DQ9UEU5 116 aa4.42□□□□□ -1.7
PRDM1-204ENST00000424894 HMCN2Q8NDA2 5059 aa4.41□□□□□ -1.7
PRDM1-204ENST00000424894 KRTAP29-1A8MX34 341 aaPredicted RBP4.41□□□□□ -1.7
PRDM1-204ENST00000424894 MT1HL1P0DM35 61 aa4.41□□□□□ -1.7
PRDM1-204ENST00000424894 C18orf32Q8TCD1 76 aa4.41□□□□□ -1.7
PRDM1-204ENST00000424894 C2orf48Q96LS8 159 aa4.41□□□□□ -1.7
PRDM1-204ENST00000424894 VAMP8Q9BV40 100 aa4.41□□□□□ -1.7
PRDM1-204ENST00000424894 VCX2Q9H322 139 aa4.41□□□□□ -1.7
PRDM1-204ENST00000424894 TRAPPC1Q9Y5R8 145 aa4.41□□□□□ -1.7
PRDM1-204ENST00000424894 TNXBP22105 4242 aa4.41□□□□□ -1.7
PRDM1-204ENST00000424894 LINC01546A6NGU7 62 aa4.4□□□□□ -1.71
PRDM1-204ENST00000424894 NDUFA1O15239 70 aa4.4□□□□□ -1.71
PRDM1-204ENST00000424894 SPINK8P0C7L1 97 aa4.4□□□□□ -1.71
PRDM1-204ENST00000424894 HERV-K104P63124 156 aa4.4□□□□□ -1.71
PRDM1-204ENST00000424894 VAMP3Q15836 100 aa4.4□□□□□ -1.71
PRDM1-204ENST00000424894 BATFQ16520 125 aa4.4□□□□□ -1.71
PRDM1-204ENST00000424894 COX19Q49B96 90 aa4.4□□□□□ -1.71
PRDM1-204ENST00000424894 C9orf129Q5T035 196 aaKnown RBP4.4□□□□□ -1.71
PRDM1-204ENST00000424894 Q6ZN92 141 aa4.4□□□□□ -1.71
PRDM1-204ENST00000424894 FA2HQ7L5A8 372 aa4.4□□□□□ -1.71
PRDM1-204ENST00000424894 SMIM1B2RUZ4 78 aa4.39□□□□□ -1.71
PRDM1-204ENST00000424894 TAX1BP3O14907 124 aa4.39□□□□□ -1.71
PRDM1-204ENST00000424894 SERTAD4-AS1Q5TG53 156 aa4.39□□□□□ -1.71
PRDM1-204ENST00000424894 ERASQ7Z444 233 aa4.39□□□□□ -1.71
PRDM1-204ENST00000424894 C7orf33Q8WU49 177 aa4.39□□□□□ -1.71
PRDM1-204ENST00000424894 TIMM17AQ99595 171 aa4.39□□□□□ -1.71
PRDM1-204ENST00000424894 XAGE1AQ9HD64 81 aa4.39□□□□□ -1.71
PRDM1-204ENST00000424894 MRPL35Q9NZE8 188 aaKnown RBP4.39□□□□□ -1.71
PRDM1-204ENST00000424894 PSORS1C2Q9UIG4 136 aa4.39□□□□□ -1.71
PRDM1-204ENST00000424894 A4D1N5 150 aa4.38□□□□□ -1.71
PRDM1-204ENST00000424894 MT-ND6P03923 174 aa4.38□□□□□ -1.71
PRDM1-204ENST00000424894 FAM19A3Q7Z5A8 133 aa4.38□□□□□ -1.71
PRDM1-204ENST00000424894 GEMIN7Q9H840 131 aaKnown RBP4.37□□□□□ -1.71
PRDM1-204ENST00000424894 TINCRA0A1B0GVN0 87 aa4.36□□□□□ -1.71
PRDM1-204ENST00000424894 K7EMI3 77 aa4.36□□□□□ -1.71
PRDM1-204ENST00000424894 PRSS2P07478 247 aa4.36□□□□□ -1.71
PRDM1-204ENST00000424894 LINC00310P59036 64 aa4.36□□□□□ -1.71
PRDM1-204ENST00000424894 HERVK_113P63121 156 aa4.36□□□□□ -1.71
PRDM1-204ENST00000424894 HSD52Q0P140 79 aa4.36□□□□□ -1.71
PRDM1-204ENST00000424894 PMVKQ15126 192 aa4.36□□□□□ -1.71
PRDM1-204ENST00000424894 C6orf226Q5I0X4 101 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms