RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 CKS1BP61024 79 aa11.62□□□□□ -0.55
PAX3-208ENST00000409828 UNQ6190/PRO20217Q6UXQ8 127 aa11.62□□□□□ -0.55
PAX3-208ENST00000409828 LINC00474Q9P2X8 69 aa11.62□□□□□ -0.55
PAX3-208ENST00000409828 KIAA1109Q2LD37 5005 aa11.62□□□□□ -0.55
PAX3-208ENST00000409828 LOC107984640A0A0U1RRK4 108 aa11.61□□□□□ -0.55
PAX3-208ENST00000409828 S100A6P06703 90 aa11.61□□□□□ -0.55
PAX3-208ENST00000409828 PET117Q6UWS5 81 aa11.61□□□□□ -0.55
PAX3-208ENST00000409828 TMEM223A0PJW6 202 aa11.6□□□□□ -0.55
PAX3-208ENST00000409828 H0Y8G0 127 aa11.6□□□□□ -0.55
PAX3-208ENST00000409828 DPM2O94777 84 aa11.6□□□□□ -0.55
PAX3-208ENST00000409828 C10orf25Q5T742 122 aa11.6□□□□□ -0.55
PAX3-208ENST00000409828 SFTA2Q6UW10 78 aa11.6□□□□□ -0.55
PAX3-208ENST00000409828 C6orf48Q9UBA6 75 aa11.6□□□□□ -0.55
PAX3-208ENST00000409828 C2orf82Q6UX34 121 aa11.59□□□□□ -0.55
PAX3-208ENST00000409828 LINC01545Q5VT33 79 aa11.58□□□□□ -0.56
PAX3-208ENST00000409828 HIST3H2BBQ8N257 126 aa11.58□□□□□ -0.56
PAX3-208ENST00000409828 SPACA4Q8TDM5 124 aa11.58□□□□□ -0.56
PAX3-208ENST00000409828 HSPG2P98160 4391 aa11.58□□□□□ -0.56
PAX3-208ENST00000409828 IGKCP01834 107 aa11.57□□□□□ -0.56
PAX3-208ENST00000409828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.57□□□□□ -0.56
PAX3-208ENST00000409828 C3orf79P0CE67 100 aa11.56□□□□□ -0.56
PAX3-208ENST00000409828 PTTG1IPP53801 180 aa11.56□□□□□ -0.56
PAX3-208ENST00000409828 SCXQ7RTU7 201 aa11.56□□□□□ -0.56
PAX3-208ENST00000409828 RYR1P21817 5038 aa11.55□□□□□ -0.56
PAX3-208ENST00000409828 A0A096LNI7 61 aa11.55□□□□□ -0.56
PAX3-208ENST00000409828 NDUFC2-KCTD14E9PQ53 114 aa11.55□□□□□ -0.56
PAX3-208ENST00000409828 S100A2P29034 98 aa11.55□□□□□ -0.56
PAX3-208ENST00000409828 AKR1D1P51857 326 aa11.55□□□□□ -0.56
PAX3-208ENST00000409828 CIRBP-AS1Q8TBR5 109 aa11.55□□□□□ -0.56
PAX3-208ENST00000409828 PANO1I0J062 215 aa11.54□□□□□ -0.56
PAX3-208ENST00000409828 C5orf52A6NGY3 159 aa11.53□□□□□ -0.56
PAX3-208ENST00000409828 CHTF8P0CG12 524 aa11.53□□□□□ -0.56
PAX3-208ENST00000409828 HERVK_113P61574 105 aa11.53□□□□□ -0.56
PAX3-208ENST00000409828 HIST1H2BLQ99880 126 aa11.53□□□□□ -0.56
PAX3-208ENST00000409828 PLAC8Q9NZF1 115 aa11.53□□□□□ -0.56
PAX3-208ENST00000409828 IGKV2-24A0A0C4DH68 120 aa11.52□□□□□ -0.57
PAX3-208ENST00000409828 KRTDAPP60985 99 aa11.52□□□□□ -0.57
PAX3-208ENST00000409828 PMCHL2Q9BQD1 86 aa11.52□□□□□ -0.57
PAX3-208ENST00000409828 A0A087WYN8 130 aa11.51□□□□□ -0.57
PAX3-208ENST00000409828 C20orf202A1L168 122 aa11.51□□□□□ -0.57
PAX3-208ENST00000409828 EPM2AB3EWF7 344 aa11.51□□□□□ -0.57
PAX3-208ENST00000409828 SNRPEP62304 92 aaKnown RBP11.51□□□□□ -0.57
PAX3-208ENST00000409828 RPL18AQ02543 176 aaKnown RBP11.51□□□□□ -0.57
PAX3-208ENST00000409828 GAGE2BQ13066 116 aa11.51□□□□□ -0.57
PAX3-208ENST00000409828 MAJINQ3KP22 176 aa11.51□□□□□ -0.57
PAX3-208ENST00000409828 Q6ZRP5 223 aa11.51□□□□□ -0.57
PAX3-208ENST00000409828 ZNF625Q96I27 306 aaPredicted RBP11.51□□□□□ -0.57
PAX3-208ENST00000409828 LEPROTO15243 131 aa11.5□□□□□ -0.57
PAX3-208ENST00000409828 C9orf116Q5BN46 136 aaPredicted RBP11.5□□□□□ -0.57
PAX3-208ENST00000409828 PLEKHB2Q96CS7 222 aa11.5□□□□□ -0.57
PAX3-208ENST00000409828 DPH3Q96FX2 82 aa11.5□□□□□ -0.57
PAX3-208ENST00000409828 COX17Q14061 63 aa11.49□□□□□ -0.57
PAX3-208ENST00000409828 Q8N1X5 172 aa11.49□□□□□ -0.57
PAX3-208ENST00000409828 STPG4Q8N801 248 aa11.48□□□□□ -0.57
PAX3-208ENST00000409828 HERC2O95714 4834 aa11.48□□□□□ -0.57
PAX3-208ENST00000409828 E9PLD3 99 aa11.47□□□□□ -0.57
PAX3-208ENST00000409828 HERV-K104P63124 156 aa11.47□□□□□ -0.57
PAX3-208ENST00000409828 HAMPP81172 84 aa11.47□□□□□ -0.57
PAX3-208ENST00000409828 NMUP48645 174 aa11.46□□□□□ -0.57
PAX3-208ENST00000409828 FAT1Q14517 4588 aa11.45□□□□□ -0.58
PAX3-208ENST00000409828 LINC00587B1AMM8 73 aa11.45□□□□□ -0.58
PAX3-208ENST00000409828 J3QQQ9 107 aa11.45□□□□□ -0.58
PAX3-208ENST00000409828 GAGE2EQ4V326 116 aa11.45□□□□□ -0.58
PAX3-208ENST00000409828 GAGE2DQ9UEU5 116 aa11.45□□□□□ -0.58
PAX3-208ENST00000409828 NDUFA12Q9UI09 145 aa11.45□□□□□ -0.58
PAX3-208ENST00000409828 ERG28Q9UKR5 140 aa11.45□□□□□ -0.58
PAX3-208ENST00000409828 MYMXA0A1B0GTQ4 84 aa11.44□□□□□ -0.58
PAX3-208ENST00000409828 FAM229AH3BQW9 127 aa11.43□□□□□ -0.58
PAX3-208ENST00000409828 A0A1W2PNN7 141 aa11.42□□□□□ -0.58
PAX3-208ENST00000409828 SMR3BP02814 79 aaPredicted RBP11.42□□□□□ -0.58
PAX3-208ENST00000409828 LGALS3P17931 250 aaKnown RBP11.42□□□□□ -0.58
PAX3-208ENST00000409828 C9orf129Q5T035 196 aaKnown RBP11.42□□□□□ -0.58
PAX3-208ENST00000409828 TSPEAR-AS2P59090 65 aa11.41□□□□□ -0.58
PAX3-208ENST00000409828 LINC00528Q8N1L1 170 aa11.41□□□□□ -0.58
PAX3-208ENST00000409828 KRTAP17-1Q9BYP8 105 aa11.4□□□□□ -0.58
PAX3-208ENST00000409828 PLA2G2DQ9UNK4 145 aa11.4□□□□□ -0.58
PAX3-208ENST00000409828 PFN2P35080 140 aa11.39□□□□□ -0.59
PAX3-208ENST00000409828 Q5VSD8 79 aa11.38□□□□□ -0.59
PAX3-208ENST00000409828 C7orf33Q8WU49 177 aa11.38□□□□□ -0.59
PAX3-208ENST00000409828 XAGE1AQ9HD64 81 aa11.38□□□□□ -0.59
PAX3-208ENST00000409828 PLA2G1BP04054 148 aaKnown RBP11.37□□□□□ -0.59
PAX3-208ENST00000409828 MEIG1Q5JSS6 88 aa11.36□□□□□ -0.59
PAX3-208ENST00000409828 SND1-IT1Q9HBX3 110 aa11.36□□□□□ -0.59
PAX3-208ENST00000409828 FAM168BA1KXE4 195 aa11.35□□□□□ -0.59
PAX3-208ENST00000409828 LINC00158P58513 81 aa11.35□□□□□ -0.59
PAX3-208ENST00000409828 KRTAP7-1Q8IUC3 87 aa11.35□□□□□ -0.59
PAX3-208ENST00000409828 TP73-AS1Q9UF72 201 aa11.35□□□□□ -0.59
PAX3-208ENST00000409828 SRRM2Q9UQ35 2752 aaKnown RBP11.34□□□□□ -0.59
PAX3-208ENST00000409828 IGKV2D-26A0A0A0MRZ7 120 aa11.34□□□□□ -0.59
PAX3-208ENST00000409828 SMIM13P0DJ93 91 aa11.34□□□□□ -0.59
PAX3-208ENST00000409828 VPS13BQ7Z7G8 4022 aa11.34□□□□□ -0.59
PAX3-208ENST00000409828 IGLV5-37A0A075B6J1 123 aa11.33□□□□□ -0.6
PAX3-208ENST00000409828 FAM19A5Q7Z5A7 132 aaPredicted RBP11.33□□□□□ -0.6
PAX3-208ENST00000409828 ATOH7Q8N100 152 aa11.33□□□□□ -0.6
PAX3-208ENST00000409828 ANKRD39Q53RE8 183 aa11.32□□□□□ -0.6
PAX3-208ENST00000409828 LOC107984156A0A0G2JMH3 177 aa11.31□□□□□ -0.6
PAX3-208ENST00000409828 A0A0J9YXY3 114 aa11.31□□□□□ -0.6
PAX3-208ENST00000409828 HSBP1L1C9JCN9 74 aa11.31□□□□□ -0.6
PAX3-208ENST00000409828 M0QXV9 152 aa11.31□□□□□ -0.6
PAX3-208ENST00000409828 SCGB1D1O95968 90 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms