RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 SMKR1H3BMG3 65 aa9.19□□□□□ -0.94
CTSA-216ENST00000607212 APOMO95445 188 aa9.19□□□□□ -0.94
CTSA-216ENST00000607212 A0A1W2PNN7 141 aa9.18□□□□□ -0.94
CTSA-216ENST00000607212 VCYO14598 125 aa9.18□□□□□ -0.94
CTSA-216ENST00000607212 RAB4AP20338 218 aa9.18□□□□□ -0.94
CTSA-216ENST00000607212 POLR2KP53803 58 aaKnown RBP9.18□□□□□ -0.94
CTSA-216ENST00000607212 SRSF9Q13242 221 aaKnown RBP eCLIP9.18□□□□□ -0.94
CTSA-216ENST00000607212 RIGQ13278 110 aa9.18□□□□□ -0.94
CTSA-216ENST00000607212 C9orf116Q5BN46 136 aaPredicted RBP9.18□□□□□ -0.94
CTSA-216ENST00000607212 C1orf137Q5JT78 98 aa9.18□□□□□ -0.94
CTSA-216ENST00000607212 C5orf38Q86SI9 138 aa9.18□□□□□ -0.94
CTSA-216ENST00000607212 NUP35Q8NFH5 326 aa9.18□□□□□ -0.94
CTSA-216ENST00000607212 TSKUQ8WUA8 353 aa9.18□□□□□ -0.94
CTSA-216ENST00000607212 ANAPC16Q96DE5 110 aa9.18□□□□□ -0.94
CTSA-216ENST00000607212 C12orf57Q99622 126 aa9.18□□□□□ -0.94
CTSA-216ENST00000607212 KIR2DL4Q99706 377 aa9.18□□□□□ -0.94
CTSA-216ENST00000607212 TRBV27A0A0K0K1C4 114 aa9.17□□□□□ -0.94
CTSA-216ENST00000607212 HIST1H2BKO60814 126 aa9.17□□□□□ -0.94
CTSA-216ENST00000607212 TRGC2P03986 189 aa9.17□□□□□ -0.94
CTSA-216ENST00000607212 S100A8P05109 93 aa9.17□□□□□ -0.94
CTSA-216ENST00000607212 HIST1H2BJP06899 126 aa9.17□□□□□ -0.94
CTSA-216ENST00000607212 HIST1H2BOP23527 126 aa9.17□□□□□ -0.94
CTSA-216ENST00000607212 HIST1H2BBP33778 126 aa9.17□□□□□ -0.94
CTSA-216ENST00000607212 HIST1H2BDP58876 126 aa9.17□□□□□ -0.94
CTSA-216ENST00000607212 HIST1H2BCP62807 126 aa9.17□□□□□ -0.94
CTSA-216ENST00000607212 SPAG11BQ08648 103 aa9.17□□□□□ -0.94
CTSA-216ENST00000607212 HIST2H2BEQ16778 126 aa9.17□□□□□ -0.94
CTSA-216ENST00000607212 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.17□□□□□ -0.94
CTSA-216ENST00000607212 HIST1H2BHQ93079 126 aa9.17□□□□□ -0.94
CTSA-216ENST00000607212 TMEM18Q96B42 140 aa9.17□□□□□ -0.94
CTSA-216ENST00000607212 HIST1H2BNQ99877 126 aa9.17□□□□□ -0.94
CTSA-216ENST00000607212 HIST1H2BMQ99879 126 aa9.17□□□□□ -0.94
CTSA-216ENST00000607212 OPRPNQ99935 248 aaPredicted RBP9.17□□□□□ -0.94
CTSA-216ENST00000607212 PPP1R17O96001 155 aa9.16□□□□□ -0.94
CTSA-216ENST00000607212 NDUFA6P56556 154 aa9.16□□□□□ -0.94
CTSA-216ENST00000607212 LINC01551Q86U37 167 aa9.16□□□□□ -0.94
CTSA-216ENST00000607212 PSORS1C2Q9UIG4 136 aa9.16□□□□□ -0.94
CTSA-216ENST00000607212 IFITM10A6NMD0 228 aa9.15□□□□□ -0.94
CTSA-216ENST00000607212 SMIM6P0DI80 62 aa9.15□□□□□ -0.94
CTSA-216ENST00000607212 SUMO2P61956 95 aaKnown RBP9.15□□□□□ -0.94
CTSA-216ENST00000607212 Q6ZUT4 128 aa9.15□□□□□ -0.94
CTSA-216ENST00000607212 PHF5AQ7RTV0 110 aaKnown RBP9.15□□□□□ -0.94
CTSA-216ENST00000607212 C2orf48Q96LS8 159 aa9.15□□□□□ -0.94
CTSA-216ENST00000607212 UBE2D4Q9Y2X8 147 aa9.15□□□□□ -0.94
CTSA-216ENST00000607212 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.14□□□□□ -0.95
CTSA-216ENST00000607212 S100PP25815 95 aa9.14□□□□□ -0.95
CTSA-216ENST00000607212 PPP1R2P9O14990 202 aa9.13□□□□□ -0.95
CTSA-216ENST00000607212 ORAOV1Q8WV07 137 aa9.13□□□□□ -0.95
CTSA-216ENST00000607212 IMMP2LQ96T52 175 aa9.13□□□□□ -0.95
CTSA-216ENST00000607212 OSTCQ9NRP0 149 aa9.13□□□□□ -0.95
CTSA-216ENST00000607212 A0A087WZ39 114 aa9.12□□□□□ -0.95
CTSA-216ENST00000607212 HIST3H2BBQ8N257 126 aa9.12□□□□□ -0.95
CTSA-216ENST00000607212 CSDC2Q9Y534 153 aaKnown RBP9.12□□□□□ -0.95
CTSA-216ENST00000607212 PCP4L1A6NKN8 68 aa9.11□□□□□ -0.95
CTSA-216ENST00000607212 NRACQ8N912 160 aa9.11□□□□□ -0.95
CTSA-216ENST00000607212 NDUFA1O15239 70 aa9.1□□□□□ -0.95
CTSA-216ENST00000607212 S100A12P80511 92 aa9.1□□□□□ -0.95
CTSA-216ENST00000607212 MRPL51Q4U2R6 128 aaKnown RBP9.1□□□□□ -0.95
CTSA-216ENST00000607212 FAM19A5Q7Z5A7 132 aaPredicted RBP9.1□□□□□ -0.95
CTSA-216ENST00000607212 OR10D4PQ8NGN7 298 aa9.1□□□□□ -0.95
CTSA-216ENST00000607212 DIRC1Q969H9 104 aa9.1□□□□□ -0.95
CTSA-216ENST00000607212 NAT8BQ9UHF3 227 aa9.1□□□□□ -0.95
CTSA-216ENST00000607212 CKS2P33552 79 aa9.09□□□□□ -0.95
CTSA-216ENST00000607212 RNF151Q2KHN1 245 aa9.09□□□□□ -0.95
CTSA-216ENST00000607212 COA6Q5JTJ3 125 aaKnown RBP9.09□□□□□ -0.95
CTSA-216ENST00000607212 V9GYV3 84 aa9.09□□□□□ -0.95
CTSA-216ENST00000607212 IGLV7-43P04211 117 aa9.08□□□□□ -0.96
CTSA-216ENST00000607212 RPL39P62891 51 aaKnown RBP9.08□□□□□ -0.96
CTSA-216ENST00000607212 UBE2BP63146 152 aa9.08□□□□□ -0.96
CTSA-216ENST00000607212 GAGE2EQ4V326 116 aa9.08□□□□□ -0.96
CTSA-216ENST00000607212 FAM104BQ5XKR9 115 aa9.08□□□□□ -0.96
CTSA-216ENST00000607212 PRR26Q8N8Z3 221 aa9.08□□□□□ -0.96
CTSA-216ENST00000607212 TIMM21Q9BVV7 248 aa9.08□□□□□ -0.96
CTSA-216ENST00000607212 MRPL35Q9NZE8 188 aaKnown RBP9.08□□□□□ -0.96
CTSA-216ENST00000607212 GAGE2DQ9UEU5 116 aa9.08□□□□□ -0.96
CTSA-216ENST00000607212 TCAPO15273 167 aa9.07□□□□□ -0.96
CTSA-216ENST00000607212 HBBP68871 147 aa9.07□□□□□ -0.96
CTSA-216ENST00000607212 TRAV9-1A0A075B6T8 112 aa9.06□□□□□ -0.96
CTSA-216ENST00000607212 FAM168BA1KXE4 195 aa9.06□□□□□ -0.96
CTSA-216ENST00000607212 S100A2P29034 98 aa9.06□□□□□ -0.96
CTSA-216ENST00000607212 C20orf78Q9BR46 151 aa9.06□□□□□ -0.96
CTSA-216ENST00000607212 F8WDY8 70 aa9.05□□□□□ -0.96
CTSA-216ENST00000607212 UBE2D1P51668 147 aa9.05□□□□□ -0.96
CTSA-216ENST00000607212 PYY3Q5JQD4 70 aa9.05□□□□□ -0.96
CTSA-216ENST00000607212 UNQ6190/PRO20217Q6UXQ8 127 aa9.05□□□□□ -0.96
CTSA-216ENST00000607212 SPANXA1Q9NS26 97 aa9.05□□□□□ -0.96
CTSA-216ENST00000607212 H0Y9J4 135 aa9.04□□□□□ -0.96
CTSA-216ENST00000607212 TNFRSF6BO95407 300 aa9.04□□□□□ -0.96
CTSA-216ENST00000607212 PDZD11Q5EBL8 140 aa9.04□□□□□ -0.96
CTSA-216ENST00000607212 C10orf25Q5T742 122 aa9.04□□□□□ -0.96
CTSA-216ENST00000607212 HIST1H2BLQ99880 126 aa9.04□□□□□ -0.96
CTSA-216ENST00000607212 SMIM2Q9BVW6 85 aa9.04□□□□□ -0.96
CTSA-216ENST00000607212 TRAPPC1Q9Y5R8 145 aa9.04□□□□□ -0.96
CTSA-216ENST00000607212 D6R8Y8 96 aa9.03□□□□□ -0.96
CTSA-216ENST00000607212 MRPL54Q6P161 138 aaKnown RBP9.03□□□□□ -0.96
CTSA-216ENST00000607212 C6orf48Q9UBA6 75 aa9.03□□□□□ -0.96
CTSA-216ENST00000607212 A0A1B0GW15 77 aa9.02□□□□□ -0.97
CTSA-216ENST00000607212 M0QXV9 152 aa9.02□□□□□ -0.97
CTSA-216ENST00000607212 FABP4P15090 132 aa9.02□□□□□ -0.97
CTSA-216ENST00000607212 IFI27P40305 119 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms