RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 LINC00959A0A1B0GUT2 108 aa8.39□□□□□ -1.07
H3F3B-213ENST00000593254 SMIM27A0A1W2PRY6 76 aa8.39□□□□□ -1.07
H3F3B-213ENST00000593254 PPP1R17O96001 155 aa8.39□□□□□ -1.07
H3F3B-213ENST00000593254 SPACA4Q8TDM5 124 aa8.39□□□□□ -1.07
H3F3B-213ENST00000593254 CDC42SE2Q9NRR3 84 aa8.39□□□□□ -1.07
H3F3B-213ENST00000593254 VCYO14598 125 aa8.38□□□□□ -1.07
H3F3B-213ENST00000593254 CCL25O15444 150 aa8.38□□□□□ -1.07
H3F3B-213ENST00000593254 MT-ND6P03923 174 aa8.38□□□□□ -1.07
H3F3B-213ENST00000593254 CHTF8P0CG12 524 aa8.38□□□□□ -1.07
H3F3B-213ENST00000593254 XCL1P47992 114 aa8.38□□□□□ -1.07
H3F3B-213ENST00000593254 AKR1D1P51857 326 aa8.38□□□□□ -1.07
H3F3B-213ENST00000593254 SUMO2P61956 95 aaKnown RBP8.38□□□□□ -1.07
H3F3B-213ENST00000593254 FAM104BQ5XKR9 115 aa8.38□□□□□ -1.07
H3F3B-213ENST00000593254 A0A087WYN8 130 aa8.37□□□□□ -1.07
H3F3B-213ENST00000593254 S100A12P80511 92 aa8.37□□□□□ -1.07
H3F3B-213ENST00000593254 MRPL51Q4U2R6 128 aaKnown RBP8.37□□□□□ -1.07
H3F3B-213ENST00000593254 ZNF664Q8N3J9 261 aa8.37□□□□□ -1.07
H3F3B-213ENST00000593254 A0A1B0GW15 77 aa8.36□□□□□ -1.07
H3F3B-213ENST00000593254 FCER1GP30273 86 aa8.36□□□□□ -1.07
H3F3B-213ENST00000593254 CAMPP49913 170 aa8.36□□□□□ -1.07
H3F3B-213ENST00000593254 COX6A2Q02221 97 aa8.36□□□□□ -1.07
H3F3B-213ENST00000593254 SS18Q15532 418 aa8.36□□□□□ -1.07
H3F3B-213ENST00000593254 HIST3H2BBQ8N257 126 aa8.36□□□□□ -1.07
H3F3B-213ENST00000593254 KIR2DL4Q99706 377 aa8.36□□□□□ -1.07
H3F3B-213ENST00000593254 PLAC8Q9NZF1 115 aa8.36□□□□□ -1.07
H3F3B-213ENST00000593254 CSDC2Q9Y534 153 aaKnown RBP8.36□□□□□ -1.07
H3F3B-213ENST00000593254 IGHV1-58A0A0C4DH39 117 aa8.35□□□□□ -1.07
H3F3B-213ENST00000593254 NDUFA6P56556 154 aa8.35□□□□□ -1.07
H3F3B-213ENST00000593254 CD164L2Q6UWJ8 174 aa8.35□□□□□ -1.07
H3F3B-213ENST00000593254 PRSS3P2Q8NHM4 247 aa8.35□□□□□ -1.07
H3F3B-213ENST00000593254 DPH3Q96FX2 82 aa8.35□□□□□ -1.07
H3F3B-213ENST00000593254 GNB1LQ9BYB4 327 aa8.35□□□□□ -1.07
H3F3B-213ENST00000593254 UBE2D4Q9Y2X8 147 aa8.35□□□□□ -1.07
H3F3B-213ENST00000593254 S100A2P29034 98 aa8.34□□□□□ -1.07
H3F3B-213ENST00000593254 RPL32P62910 135 aaKnown RBP8.34□□□□□ -1.07
H3F3B-213ENST00000593254 SMAGPQ0VAQ4 97 aa8.34□□□□□ -1.07
H3F3B-213ENST00000593254 ATP5L2Q7Z4Y8 100 aa8.34□□□□□ -1.07
H3F3B-213ENST00000593254 C12orf57Q99622 126 aa8.34□□□□□ -1.07
H3F3B-213ENST00000593254 C20orf78Q9BR46 151 aa8.34□□□□□ -1.07
H3F3B-213ENST00000593254 TRAPPC1Q9Y5R8 145 aa8.34□□□□□ -1.07
H3F3B-213ENST00000593254 A0A1B0GXF2 115 aa8.33□□□□□ -1.08
H3F3B-213ENST00000593254 CKS2P33552 79 aa8.33□□□□□ -1.08
H3F3B-213ENST00000593254 HBBP68871 147 aa8.33□□□□□ -1.08
H3F3B-213ENST00000593254 IGKV2-24A0A0C4DH68 120 aa8.32□□□□□ -1.08
H3F3B-213ENST00000593254 TNFRSF6BO95407 300 aa8.32□□□□□ -1.08
H3F3B-213ENST00000593254 MRPL54Q6P161 138 aaKnown RBP8.32□□□□□ -1.08
H3F3B-213ENST00000593254 LINC00526Q96FQ7 95 aa8.32□□□□□ -1.08
H3F3B-213ENST00000593254 PACRGQ96M98 296 aaPredicted RBP8.32□□□□□ -1.08
H3F3B-213ENST00000593254 TIMM21Q9BVV7 248 aa8.32□□□□□ -1.08
H3F3B-213ENST00000593254 A0A096LNI7 61 aa8.31□□□□□ -1.08
H3F3B-213ENST00000593254 IFITM10A6NMD0 228 aa8.31□□□□□ -1.08
H3F3B-213ENST00000593254 D6R8Y8 96 aa8.31□□□□□ -1.08
H3F3B-213ENST00000593254 TCAPO15273 167 aa8.31□□□□□ -1.08
H3F3B-213ENST00000593254 MAJINQ3KP22 176 aa8.31□□□□□ -1.08
H3F3B-213ENST00000593254 RNASE13Q5GAN3 156 aaKnown RBP8.31□□□□□ -1.08
H3F3B-213ENST00000593254 Q6ZUT4 128 aa8.31□□□□□ -1.08
H3F3B-213ENST00000593254 TMEM18Q96B42 140 aa8.31□□□□□ -1.08
H3F3B-213ENST00000593254 CARD19Q96LW7 228 aa8.31□□□□□ -1.08
H3F3B-213ENST00000593254 SMIM2Q9BVW6 85 aa8.31□□□□□ -1.08
H3F3B-213ENST00000593254 ZNF561-AS1K7EIQ3 104 aa8.3□□□□□ -1.08
H3F3B-213ENST00000593254 COX7A2LO14548 114 aa8.3□□□□□ -1.08
H3F3B-213ENST00000593254 Q6ZRU5 148 aa8.3□□□□□ -1.08
H3F3B-213ENST00000593254 PKIGQ9Y2B9 76 aa8.3□□□□□ -1.08
H3F3B-213ENST00000593254 TRAV13-1A0A0B4J241 112 aa8.29□□□□□ -1.08
H3F3B-213ENST00000593254 NPYP01303 97 aa8.29□□□□□ -1.08
H3F3B-213ENST00000593254 PPBPP02775 128 aa8.29□□□□□ -1.08
H3F3B-213ENST00000593254 RPL39P62891 51 aaKnown RBP8.29□□□□□ -1.08
H3F3B-213ENST00000593254 SYCNQ0VAF6 134 aa8.29□□□□□ -1.08
H3F3B-213ENST00000593254 TMEM136Q6ZRR5 245 aa8.29□□□□□ -1.08
H3F3B-213ENST00000593254 STPG4Q8N801 248 aa8.29□□□□□ -1.08
H3F3B-213ENST00000593254 C7orf33Q8WU49 177 aa8.29□□□□□ -1.08
H3F3B-213ENST00000593254 FAM104AQ969W3 186 aa8.29□□□□□ -1.08
H3F3B-213ENST00000593254 HIST1H2BLQ99880 126 aa8.29□□□□□ -1.08
H3F3B-213ENST00000593254 KRTAP4-12Q9BQ66 201 aa8.29□□□□□ -1.08
H3F3B-213ENST00000593254 MRPL18Q9H0U6 180 aaKnown RBP8.29□□□□□ -1.08
H3F3B-213ENST00000593254 LINC00474Q9P2X8 69 aa8.29□□□□□ -1.08
H3F3B-213ENST00000593254 MALP21145 153 aa8.28□□□□□ -1.08
H3F3B-213ENST00000593254 IGLV4-69A0A075B6H9 119 aa8.27□□□□□ -1.09
H3F3B-213ENST00000593254 SPANXA1Q9NS26 97 aa8.27□□□□□ -1.09
H3F3B-213ENST00000593254 MRPS36P82909 103 aaKnown RBP8.26□□□□□ -1.09
H3F3B-213ENST00000593254 PYY3Q5JQD4 70 aa8.26□□□□□ -1.09
H3F3B-213ENST00000593254 C5orf38Q86SI9 138 aa8.26□□□□□ -1.09
H3F3B-213ENST00000593254 ORMDL3Q8N138 153 aa8.26□□□□□ -1.09
H3F3B-213ENST00000593254 OR10D4PQ8NGN7 298 aa8.26□□□□□ -1.09
H3F3B-213ENST00000593254 FABP4P15090 132 aa8.25□□□□□ -1.09
H3F3B-213ENST00000593254 PRR3P79522 188 aaKnown RBP8.25□□□□□ -1.09
H3F3B-213ENST00000593254 JOSD1Q15040 202 aaPredicted RBP8.25□□□□□ -1.09
H3F3B-213ENST00000593254 C2orf48Q96LS8 159 aa8.25□□□□□ -1.09
H3F3B-213ENST00000593254 PRELID3AQ96N28 172 aa8.25□□□□□ -1.09
H3F3B-213ENST00000593254 LOC107984640A0A0U1RRK4 108 aa8.24□□□□□ -1.09
H3F3B-213ENST00000593254 APOMO95445 188 aa8.24□□□□□ -1.09
H3F3B-213ENST00000593254 PTTG1IPP53801 180 aa8.24□□□□□ -1.09
H3F3B-213ENST00000593254 LCE3BQ5TA77 95 aa8.24□□□□□ -1.09
H3F3B-213ENST00000593254 CAMK2N2Q96S95 79 aa8.24□□□□□ -1.09
H3F3B-213ENST00000593254 OPRPNQ99935 248 aaPredicted RBP8.24□□□□□ -1.09
H3F3B-213ENST00000593254 IGHV3OR16-9A0A0B4J2B5 98 aa8.23□□□□□ -1.09
H3F3B-213ENST00000593254 PRSS47A8MTI9 375 aa8.23□□□□□ -1.09
H3F3B-213ENST00000593254 LAMTOR2Q9Y2Q5 125 aa8.23□□□□□ -1.09
H3F3B-213ENST00000593254 SPAG11BQ08648 103 aa8.22□□□□□ -1.09
H3F3B-213ENST00000593254 PYGO1Q9Y3Y4 419 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms