RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 SLPIP03973 132 aa8.28□□□□□ -1.08
RPAIN-202ENST00000381208 S100A2P29034 98 aa8.28□□□□□ -1.08
RPAIN-202ENST00000381208 COA6Q5JTJ3 125 aaKnown RBP8.28□□□□□ -1.08
RPAIN-202ENST00000381208 Q6ZRU5 148 aa8.28□□□□□ -1.08
RPAIN-202ENST00000381208 C15orf56Q8N910 161 aa8.28□□□□□ -1.08
RPAIN-202ENST00000381208 OR5A1Q8NGJ0 315 aa8.28□□□□□ -1.08
RPAIN-202ENST00000381208 SPACA4Q8TDM5 124 aa8.28□□□□□ -1.08
RPAIN-202ENST00000381208 CHCHD10Q8WYQ3 142 aaPredicted RBP8.28□□□□□ -1.08
RPAIN-202ENST00000381208 TMEM191AQ9H0A3 160 aa8.28□□□□□ -1.08
RPAIN-202ENST00000381208 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.27□□□□□ -1.09
RPAIN-202ENST00000381208 A0A087WYN8 130 aa8.27□□□□□ -1.09
RPAIN-202ENST00000381208 IGKV2-29A2NJV5 120 aaPredicted RBP8.27□□□□□ -1.09
RPAIN-202ENST00000381208 PANO1I0J062 215 aa8.27□□□□□ -1.09
RPAIN-202ENST00000381208 PPP1R17O96001 155 aa8.27□□□□□ -1.09
RPAIN-202ENST00000381208 SMIM6P0DI80 62 aa8.27□□□□□ -1.09
RPAIN-202ENST00000381208 LINC00518Q8N0U6 118 aa8.27□□□□□ -1.09
RPAIN-202ENST00000381208 MRAP2Q96G30 205 aa8.27□□□□□ -1.09
RPAIN-202ENST00000381208 ST20Q9HBF5 79 aa8.27□□□□□ -1.09
RPAIN-202ENST00000381208 PLAC8Q9NZF1 115 aa8.27□□□□□ -1.09
RPAIN-202ENST00000381208 FAT3Q8TDW7 4589 aa8.27□□□□□ -1.09
RPAIN-202ENST00000381208 GVQW2A0A096LPI5 108 aaPredicted RBP8.26□□□□□ -1.09
RPAIN-202ENST00000381208 SMAGPQ0VAQ4 97 aa8.26□□□□□ -1.09
RPAIN-202ENST00000381208 C7orf33Q8WU49 177 aa8.26□□□□□ -1.09
RPAIN-202ENST00000381208 LINC00474Q9P2X8 69 aa8.26□□□□□ -1.09
RPAIN-202ENST00000381208 H3BS24 57 aa8.25□□□□□ -1.09
RPAIN-202ENST00000381208 ESDP10768 282 aa8.25□□□□□ -1.09
RPAIN-202ENST00000381208 HIST3H2BBQ8N257 126 aa8.25□□□□□ -1.09
RPAIN-202ENST00000381208 NUP35Q8NFH5 326 aa8.25□□□□□ -1.09
RPAIN-202ENST00000381208 IGHV1-58A0A0C4DH39 117 aa8.24□□□□□ -1.09
RPAIN-202ENST00000381208 TRBV27A0A0K0K1C4 114 aa8.24□□□□□ -1.09
RPAIN-202ENST00000381208 COX6A2Q02221 97 aa8.24□□□□□ -1.09
RPAIN-202ENST00000381208 RIGQ13278 110 aa8.24□□□□□ -1.09
RPAIN-202ENST00000381208 LCE5AQ5TCM9 118 aa8.24□□□□□ -1.09
RPAIN-202ENST00000381208 MRPL52Q86TS9 123 aaKnown RBP8.24□□□□□ -1.09
RPAIN-202ENST00000381208 A0A1B0GW15 77 aa8.23□□□□□ -1.09
RPAIN-202ENST00000381208 CCL25O15444 150 aa8.23□□□□□ -1.09
RPAIN-202ENST00000381208 CHTF8P0CG12 524 aa8.23□□□□□ -1.09
RPAIN-202ENST00000381208 POLR2KP53803 58 aaKnown RBP8.23□□□□□ -1.09
RPAIN-202ENST00000381208 FOXI1Q12951 378 aa8.23□□□□□ -1.09
RPAIN-202ENST00000381208 SS18Q15532 418 aa8.23□□□□□ -1.09
RPAIN-202ENST00000381208 HIGD2BQ4VC39 106 aa8.23□□□□□ -1.09
RPAIN-202ENST00000381208 TMEM136Q6ZRR5 245 aa8.23□□□□□ -1.09
RPAIN-202ENST00000381208 LINC00959A0A1B0GUT2 108 aa8.22□□□□□ -1.09
RPAIN-202ENST00000381208 VCYO14598 125 aa8.22□□□□□ -1.09
RPAIN-202ENST00000381208 SCGB1D1O95968 90 aa8.22□□□□□ -1.09
RPAIN-202ENST00000381208 TSHBP01222 138 aa8.22□□□□□ -1.09
RPAIN-202ENST00000381208 RAB4AP20338 218 aa8.22□□□□□ -1.09
RPAIN-202ENST00000381208 XCL1P47992 114 aa8.22□□□□□ -1.09
RPAIN-202ENST00000381208 HNRNPA3P51991 378 aaKnown RBP8.22□□□□□ -1.09
RPAIN-202ENST00000381208 C12orf57Q99622 126 aa8.22□□□□□ -1.09
RPAIN-202ENST00000381208 PKHD1L1Q86WI1 4243 aa8.22□□□□□ -1.09
RPAIN-202ENST00000381208 FCER1GP30273 86 aa8.22□□□□□ -1.09
RPAIN-202ENST00000381208 HBBP68871 147 aa8.22□□□□□ -1.09
RPAIN-202ENST00000381208 MRPL54Q6P161 138 aaKnown RBP8.22□□□□□ -1.09
RPAIN-202ENST00000381208 CD164L2Q6UWJ8 174 aa8.22□□□□□ -1.09
RPAIN-202ENST00000381208 PET117Q6UWS5 81 aa8.22□□□□□ -1.09
RPAIN-202ENST00000381208 TMEM18Q96B42 140 aa8.22□□□□□ -1.09
RPAIN-202ENST00000381208 CDC42SE2Q9NRR3 84 aa8.22□□□□□ -1.09
RPAIN-202ENST00000381208 PLA2G2DQ9UNK4 145 aa8.22□□□□□ -1.09
RPAIN-202ENST00000381208 CSDC2Q9Y534 153 aaKnown RBP8.22□□□□□ -1.09
RPAIN-202ENST00000381208 A0A1B0GXF2 115 aa8.21□□□□□ -1.1
RPAIN-202ENST00000381208 AMN1Q8IY45 258 aa8.21□□□□□ -1.1
RPAIN-202ENST00000381208 ZNF664Q8N3J9 261 aa8.21□□□□□ -1.1
RPAIN-202ENST00000381208 PRSS3P2Q8NHM4 247 aa8.21□□□□□ -1.1
RPAIN-202ENST00000381208 KIR2DL4Q99706 377 aa8.21□□□□□ -1.1
RPAIN-202ENST00000381208 IGKV2-24A0A0C4DH68 120 aa8.2□□□□□ -1.1
RPAIN-202ENST00000381208 ZNF561-AS1K7EIQ3 104 aa8.2□□□□□ -1.1
RPAIN-202ENST00000381208 TCAPO15273 167 aa8.2□□□□□ -1.1
RPAIN-202ENST00000381208 CAMPP49913 170 aa8.2□□□□□ -1.1
RPAIN-202ENST00000381208 STPG4Q8N801 248 aa8.2□□□□□ -1.1
RPAIN-202ENST00000381208 PACRGQ96M98 296 aaPredicted RBP8.2□□□□□ -1.1
RPAIN-202ENST00000381208 IFITM10A6NMD0 228 aa8.19□□□□□ -1.1
RPAIN-202ENST00000381208 GAS8-AS1O95177 125 aa8.19□□□□□ -1.1
RPAIN-202ENST00000381208 FABP4P15090 132 aa8.19□□□□□ -1.1
RPAIN-202ENST00000381208 SUMO2P61956 95 aaKnown RBP8.19□□□□□ -1.1
RPAIN-202ENST00000381208 CARD19Q96LW7 228 aa8.19□□□□□ -1.1
RPAIN-202ENST00000381208 HIST1H2BLQ99880 126 aa8.19□□□□□ -1.1
RPAIN-202ENST00000381208 A4D1N5 150 aa8.18□□□□□ -1.1
RPAIN-202ENST00000381208 H0Y8G0 127 aa8.18□□□□□ -1.1
RPAIN-202ENST00000381208 MALP21145 153 aa8.18□□□□□ -1.1
RPAIN-202ENST00000381208 PDZD11Q5EBL8 140 aa8.18□□□□□ -1.1
RPAIN-202ENST00000381208 BAGE3Q86Y29 109 aa8.18□□□□□ -1.1
RPAIN-202ENST00000381208 OR10D4PQ8NGN7 298 aa8.18□□□□□ -1.1
RPAIN-202ENST00000381208 HMCN2Q8NDA2 5059 aa8.17□□□□□ -1.1
RPAIN-202ENST00000381208 SYCNQ0VAF6 134 aa8.17□□□□□ -1.1
RPAIN-202ENST00000381208 C20orf78Q9BR46 151 aa8.17□□□□□ -1.1
RPAIN-202ENST00000381208 A0A096LNI7 61 aa8.16□□□□□ -1.1
RPAIN-202ENST00000381208 COX7A2LO14548 114 aa8.16□□□□□ -1.1
RPAIN-202ENST00000381208 APOMO95445 188 aa8.16□□□□□ -1.1
RPAIN-202ENST00000381208 RPL32P62910 135 aaKnown RBP8.16□□□□□ -1.1
RPAIN-202ENST00000381208 FAM104BQ5XKR9 115 aa8.16□□□□□ -1.1
RPAIN-202ENST00000381208 NRACQ8N912 160 aa8.16□□□□□ -1.1
RPAIN-202ENST00000381208 TIMM21Q9BVV7 248 aa8.16□□□□□ -1.1
RPAIN-202ENST00000381208 MT1HL1P0DM35 61 aa8.15□□□□□ -1.1
RPAIN-202ENST00000381208 PRR3P79522 188 aaKnown RBP8.15□□□□□ -1.1
RPAIN-202ENST00000381208 UBE2D4Q9Y2X8 147 aa8.15□□□□□ -1.1
RPAIN-202ENST00000381208 LOC107984640A0A0U1RRK4 108 aa8.14□□□□□ -1.11
RPAIN-202ENST00000381208 SMKR1H3BMG3 65 aa8.14□□□□□ -1.11
RPAIN-202ENST00000381208 MRPL51Q4U2R6 128 aaKnown RBP8.14□□□□□ -1.11
RPAIN-202ENST00000381208 C2orf48Q96LS8 159 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms