RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 CDC42SE2Q9NRR3 84 aa9.98□□□□□ -0.81
LIM2-202ENST00000596399 A0A0J9YXV3 536 aa9.97□□□□□ -0.81
LIM2-202ENST00000596399 SMKR1H3BMG3 65 aa9.97□□□□□ -0.81
LIM2-202ENST00000596399 KRTAP10-8P60410 259 aa9.97□□□□□ -0.81
LIM2-202ENST00000596399 MRAP2Q96G30 205 aa9.97□□□□□ -0.81
LIM2-202ENST00000596399 hCG_2014768A0A024R1R8 64 aa9.96□□□□□ -0.82
LIM2-202ENST00000596399 TMEM250H0YL14 139 aa9.96□□□□□ -0.82
LIM2-202ENST00000596399 POLR2KP53803 58 aaKnown RBP9.96□□□□□ -0.82
LIM2-202ENST00000596399 SYCNQ0VAF6 134 aa9.96□□□□□ -0.82
LIM2-202ENST00000596399 SRSF9Q13242 221 aaKnown RBP eCLIP9.96□□□□□ -0.82
LIM2-202ENST00000596399 SS18Q15532 418 aa9.96□□□□□ -0.82
LIM2-202ENST00000596399 RNASE13Q5GAN3 156 aaKnown RBP9.96□□□□□ -0.82
LIM2-202ENST00000596399 ALKAL2Q6UX46 152 aa9.96□□□□□ -0.82
LIM2-202ENST00000596399 AMN1Q8IY45 258 aa9.96□□□□□ -0.82
LIM2-202ENST00000596399 ZNF664Q8N3J9 261 aa9.96□□□□□ -0.82
LIM2-202ENST00000596399 ZNF561-AS1K7EIQ3 104 aa9.95□□□□□ -0.82
LIM2-202ENST00000596399 RAB4AP20338 218 aa9.95□□□□□ -0.82
LIM2-202ENST00000596399 GAGE2BQ13066 116 aa9.95□□□□□ -0.82
LIM2-202ENST00000596399 CD164L2Q6UWJ8 174 aa9.95□□□□□ -0.82
LIM2-202ENST00000596399 SPINK6Q6UWN8 80 aa9.95□□□□□ -0.82
LIM2-202ENST00000596399 MRPL52Q86TS9 123 aaKnown RBP9.95□□□□□ -0.82
LIM2-202ENST00000596399 LINC00474Q9P2X8 69 aa9.95□□□□□ -0.82
LIM2-202ENST00000596399 IGLV4-69A0A075B6H9 119 aa9.94□□□□□ -0.82
LIM2-202ENST00000596399 A0A1W2PNN7 141 aa9.94□□□□□ -0.82
LIM2-202ENST00000596399 HIGD1CA8MV81 97 aa9.94□□□□□ -0.82
LIM2-202ENST00000596399 TMEM191AQ9H0A3 160 aa9.94□□□□□ -0.82
LIM2-202ENST00000596399 TRBV27A0A0K0K1C4 114 aa9.93□□□□□ -0.82
LIM2-202ENST00000596399 A0A1B0GUT8 65 aa9.93□□□□□ -0.82
LIM2-202ENST00000596399 C7orf77A4D0Y5 90 aa9.93□□□□□ -0.82
LIM2-202ENST00000596399 CAMPP49913 170 aa9.93□□□□□ -0.82
LIM2-202ENST00000596399 PTTG1IPP53801 180 aa9.93□□□□□ -0.82
LIM2-202ENST00000596399 CT83Q5H943 113 aa9.93□□□□□ -0.82
LIM2-202ENST00000596399 Q6ZRP5 223 aa9.93□□□□□ -0.82
LIM2-202ENST00000596399 LINC01551Q86U37 167 aa9.93□□□□□ -0.82
LIM2-202ENST00000596399 TSKUQ8WUA8 353 aa9.93□□□□□ -0.82
LIM2-202ENST00000596399 BORCS7Q96B45 105 aa9.93□□□□□ -0.82
LIM2-202ENST00000596399 REG3GQ6UW15 175 aa9.92□□□□□ -0.82
LIM2-202ENST00000596399 BLOC1S1P78537 153 aa9.91□□□□□ -0.82
LIM2-202ENST00000596399 SMIM7Q9BQ49 75 aa9.91□□□□□ -0.82
LIM2-202ENST00000596399 TRAV13-1A0A0B4J241 112 aa9.9□□□□□ -0.82
LIM2-202ENST00000596399 A0A1B0GVG6 124 aa9.9□□□□□ -0.82
LIM2-202ENST00000596399 MALP21145 153 aa9.9□□□□□ -0.82
LIM2-202ENST00000596399 NRACQ8N912 160 aa9.9□□□□□ -0.82
LIM2-202ENST00000596399 NUP35Q8NFH5 326 aa9.9□□□□□ -0.82
LIM2-202ENST00000596399 UBE2D4Q9Y2X8 147 aa9.9□□□□□ -0.82
LIM2-202ENST00000596399 LPAP08519 4548 aa9.89□□□□□ -0.83
LIM2-202ENST00000596399 LOC107984640A0A0U1RRK4 108 aa9.89□□□□□ -0.83
LIM2-202ENST00000596399 C1orf196B1AJZ1 125 aa9.89□□□□□ -0.83
LIM2-202ENST00000596399 COX7A2LO14548 114 aa9.89□□□□□ -0.83
LIM2-202ENST00000596399 VCYO14598 125 aa9.89□□□□□ -0.83
LIM2-202ENST00000596399 FCER1GP30273 86 aa9.89□□□□□ -0.83
LIM2-202ENST00000596399 C5orf38Q86SI9 138 aa9.89□□□□□ -0.83
LIM2-202ENST00000596399 AKAP14Q86UN6 197 aa9.89□□□□□ -0.83
LIM2-202ENST00000596399 CAMK2N2Q96S95 79 aa9.89□□□□□ -0.83
LIM2-202ENST00000596399 OPRPNQ99935 248 aaPredicted RBP9.89□□□□□ -0.83
LIM2-202ENST00000596399 EIF5A2Q9GZV4 153 aaKnown RBP9.89□□□□□ -0.83
LIM2-202ENST00000596399 PKIGQ9Y2B9 76 aa9.89□□□□□ -0.83
LIM2-202ENST00000596399 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.88□□□□□ -0.83
LIM2-202ENST00000596399 Q6ZUT4 128 aa9.88□□□□□ -0.83
LIM2-202ENST00000596399 ISOC2Q96AB3 205 aa9.88□□□□□ -0.83
LIM2-202ENST00000596399 OSTCQ9NRP0 149 aa9.88□□□□□ -0.83
LIM2-202ENST00000596399 V9GYV3 84 aa9.88□□□□□ -0.83
LIM2-202ENST00000596399 ZNF727A8MUV8 499 aa9.87□□□□□ -0.83
LIM2-202ENST00000596399 SUMO2P61956 95 aaKnown RBP9.87□□□□□ -0.83
LIM2-202ENST00000596399 C9orf116Q5BN46 136 aaPredicted RBP9.87□□□□□ -0.83
LIM2-202ENST00000596399 PSORS1C2Q9UIG4 136 aa9.87□□□□□ -0.83
LIM2-202ENST00000596399 APOMO95445 188 aa9.86□□□□□ -0.83
LIM2-202ENST00000596399 SRP19P09132 144 aaKnown RBP9.86□□□□□ -0.83
LIM2-202ENST00000596399 RPL18AQ02543 176 aaKnown RBP9.86□□□□□ -0.83
LIM2-202ENST00000596399 PHF5AQ7RTV0 110 aaKnown RBP9.86□□□□□ -0.83
LIM2-202ENST00000596399 FAM210AQ96ND0 272 aa9.86□□□□□ -0.83
LIM2-202ENST00000596399 RIGQ13278 110 aa9.85□□□□□ -0.83
LIM2-202ENST00000596399 MRPL51Q4U2R6 128 aaKnown RBP9.85□□□□□ -0.83
LIM2-202ENST00000596399 CSDC2Q9Y534 153 aaKnown RBP9.85□□□□□ -0.83
LIM2-202ENST00000596399 RPL39P62891 51 aaKnown RBP9.84□□□□□ -0.83
LIM2-202ENST00000596399 FAM104AQ969W3 186 aa9.84□□□□□ -0.83
LIM2-202ENST00000596399 KIR2DL4Q99706 377 aa9.84□□□□□ -0.83
LIM2-202ENST00000596399 MT-ND6P03923 174 aa9.83□□□□□ -0.84
LIM2-202ENST00000596399 SPAG11BQ08648 103 aa9.83□□□□□ -0.84
LIM2-202ENST00000596399 C1orf137Q5JT78 98 aa9.83□□□□□ -0.84
LIM2-202ENST00000596399 C2orf48Q96LS8 159 aa9.83□□□□□ -0.84
LIM2-202ENST00000596399 FAM168BA1KXE4 195 aa9.82□□□□□ -0.84
LIM2-202ENST00000596399 FAM104BQ5XKR9 115 aa9.82□□□□□ -0.84
LIM2-202ENST00000596399 KRTAP11-1Q8IUC1 163 aa9.82□□□□□ -0.84
LIM2-202ENST00000596399 C9JQL5 133 aa9.81□□□□□ -0.84
LIM2-202ENST00000596399 RPL23P62829 140 aaKnown RBP9.81□□□□□ -0.84
LIM2-202ENST00000596399 C10orf25Q5T742 122 aa9.81□□□□□ -0.84
LIM2-202ENST00000596399 NAT8BQ9UHF3 227 aa9.81□□□□□ -0.84
LIM2-202ENST00000596399 PPP1R17O96001 155 aa9.8□□□□□ -0.84
LIM2-202ENST00000596399 TMEM241Q24JQ0 296 aa9.8□□□□□ -0.84
LIM2-202ENST00000596399 TIMM21Q9BVV7 248 aa9.8□□□□□ -0.84
LIM2-202ENST00000596399 SMAGPQ0VAQ4 97 aa9.79□□□□□ -0.84
LIM2-202ENST00000596399 ADIRFQ15847 76 aa9.79□□□□□ -0.84
LIM2-202ENST00000596399 FAM74A3Q4VXF1 159 aa9.79□□□□□ -0.84
LIM2-202ENST00000596399 ORAOV1Q8WV07 137 aa9.79□□□□□ -0.84
LIM2-202ENST00000596399 PPP1R2P9O14990 202 aa9.78□□□□□ -0.84
LIM2-202ENST00000596399 TNFRSF6BO95407 300 aa9.78□□□□□ -0.84
LIM2-202ENST00000596399 CKS2P33552 79 aa9.78□□□□□ -0.84
LIM2-202ENST00000596399 RNF151Q2KHN1 245 aa9.78□□□□□ -0.84
LIM2-202ENST00000596399 UNQ6190/PRO20217Q6UXQ8 127 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms