RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 GAGE2BQ13066 116 aa12.47□□□□□ -0.41
CLPTM1-204ENST00000585961 SS18Q15532 418 aa12.47□□□□□ -0.41
CLPTM1-204ENST00000585961 REG3GQ6UW15 175 aa12.47□□□□□ -0.41
CLPTM1-204ENST00000585961 ST20Q9HBF5 79 aa12.47□□□□□ -0.41
CLPTM1-204ENST00000585961 Q6ZRP5 223 aa12.46□□□□□ -0.41
CLPTM1-204ENST00000585961 CDC42SE2Q9NRR3 84 aa12.46□□□□□ -0.41
CLPTM1-204ENST00000585961 CEBPGP53567 150 aa12.45□□□□□ -0.42
CLPTM1-204ENST00000585961 TRBV6-5A0A0K0K1A5 114 aa12.44□□□□□ -0.42
CLPTM1-204ENST00000585961 A8MWL6 223 aa12.44□□□□□ -0.42
CLPTM1-204ENST00000585961 CD164L2Q6UWJ8 174 aa12.44□□□□□ -0.42
CLPTM1-204ENST00000585961 ZNF664Q8N3J9 261 aa12.44□□□□□ -0.42
CLPTM1-204ENST00000585961 MRAP2Q96G30 205 aa12.44□□□□□ -0.42
CLPTM1-204ENST00000585961 IGLV4-69A0A075B6H9 119 aa12.43□□□□□ -0.42
CLPTM1-204ENST00000585961 A0A1W2PNN7 141 aa12.43□□□□□ -0.42
CLPTM1-204ENST00000585961 TAGLN2P37802 199 aaKnown RBP12.43□□□□□ -0.42
CLPTM1-204ENST00000585961 SLC51BQ86UW2 128 aa12.43□□□□□ -0.42
CLPTM1-204ENST00000585961 PTTG1IPP53801 180 aa12.42□□□□□ -0.42
CLPTM1-204ENST00000585961 MALP21145 153 aa12.41□□□□□ -0.42
CLPTM1-204ENST00000585961 CAMPP49913 170 aa12.41□□□□□ -0.42
CLPTM1-204ENST00000585961 POLR2KP53803 58 aaKnown RBP12.41□□□□□ -0.42
CLPTM1-204ENST00000585961 RNASE13Q5GAN3 156 aaKnown RBP12.41□□□□□ -0.42
CLPTM1-204ENST00000585961 BORCS7Q96B45 105 aa12.41□□□□□ -0.42
CLPTM1-204ENST00000585961 SMKR1H3BMG3 65 aa12.4□□□□□ -0.42
CLPTM1-204ENST00000585961 RAB4AP20338 218 aa12.4□□□□□ -0.42
CLPTM1-204ENST00000585961 PKIGQ9Y2B9 76 aa12.4□□□□□ -0.42
CLPTM1-204ENST00000585961 LOC107984640A0A0U1RRK4 108 aa12.39□□□□□ -0.43
CLPTM1-204ENST00000585961 FAM231DQ6ZW35 169 aa12.39□□□□□ -0.43
CLPTM1-204ENST00000585961 MRPL52Q86TS9 123 aaKnown RBP12.39□□□□□ -0.43
CLPTM1-204ENST00000585961 AMN1Q8IY45 258 aa12.39□□□□□ -0.43
CLPTM1-204ENST00000585961 C7orf77A4D0Y5 90 aa12.38□□□□□ -0.43
CLPTM1-204ENST00000585961 C5orf38Q86SI9 138 aa12.38□□□□□ -0.43
CLPTM1-204ENST00000585961 OPRPNQ99935 248 aaPredicted RBP12.38□□□□□ -0.43
CLPTM1-204ENST00000585961 TRAV13-1A0A0B4J241 112 aa12.37□□□□□ -0.43
CLPTM1-204ENST00000585961 A0A1B0GUT8 65 aa12.37□□□□□ -0.43
CLPTM1-204ENST00000585961 HIGD1CA8MV81 97 aa12.37□□□□□ -0.43
CLPTM1-204ENST00000585961 COX7A2LO14548 114 aa12.37□□□□□ -0.43
CLPTM1-204ENST00000585961 ISOC2Q96AB3 205 aa12.37□□□□□ -0.43
CLPTM1-204ENST00000585961 CAMK2N2Q96S95 79 aa12.37□□□□□ -0.43
CLPTM1-204ENST00000585961 TMEM191AQ9H0A3 160 aa12.37□□□□□ -0.43
CLPTM1-204ENST00000585961 TRBV27A0A0K0K1C4 114 aa12.36□□□□□ -0.43
CLPTM1-204ENST00000585961 C1orf196B1AJZ1 125 aa12.36□□□□□ -0.43
CLPTM1-204ENST00000585961 VCYO14598 125 aa12.36□□□□□ -0.43
CLPTM1-204ENST00000585961 FCER1GP30273 86 aa12.36□□□□□ -0.43
CLPTM1-204ENST00000585961 C9orf116Q5BN46 136 aaPredicted RBP12.36□□□□□ -0.43
CLPTM1-204ENST00000585961 TCTE3Q8IZS6 198 aa12.36□□□□□ -0.43
CLPTM1-204ENST00000585961 NUP35Q8NFH5 326 aa12.36□□□□□ -0.43
CLPTM1-204ENST00000585961 TMEM250H0YL14 139 aa12.35□□□□□ -0.43
CLPTM1-204ENST00000585961 ALKAL2Q6UX46 152 aa12.35□□□□□ -0.43
CLPTM1-204ENST00000585961 PHF5AQ7RTV0 110 aaKnown RBP12.35□□□□□ -0.43
CLPTM1-204ENST00000585961 PSORS1C2Q9UIG4 136 aa12.35□□□□□ -0.43
CLPTM1-204ENST00000585961 MT-ND6P03923 174 aa12.34□□□□□ -0.43
CLPTM1-204ENST00000585961 TSKUQ8WUA8 353 aa12.34□□□□□ -0.43
CLPTM1-204ENST00000585961 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.33□□□□□ -0.44
CLPTM1-204ENST00000585961 APOMO95445 188 aa12.33□□□□□ -0.44
CLPTM1-204ENST00000585961 BLOC1S1P78537 153 aa12.33□□□□□ -0.44
CLPTM1-204ENST00000585961 RPL18AQ02543 176 aaKnown RBP12.33□□□□□ -0.44
CLPTM1-204ENST00000585961 CT83Q5H943 113 aa12.33□□□□□ -0.44
CLPTM1-204ENST00000585961 C1orf137Q5JT78 98 aa12.32□□□□□ -0.44
CLPTM1-204ENST00000585961 FAM210AQ96ND0 272 aa12.32□□□□□ -0.44
CLPTM1-204ENST00000585961 UBE2D4Q9Y2X8 147 aa12.32□□□□□ -0.44
CLPTM1-204ENST00000585961 LINC01551Q86U37 167 aa12.31□□□□□ -0.44
CLPTM1-204ENST00000585961 SMIM7Q9BQ49 75 aa12.31□□□□□ -0.44
CLPTM1-204ENST00000585961 EIF5A2Q9GZV4 153 aaKnown RBP12.31□□□□□ -0.44
CLPTM1-204ENST00000585961 LPAP08519 4548 aa12.3□□□□□ -0.44
CLPTM1-204ENST00000585961 RIGQ13278 110 aa12.3□□□□□ -0.44
CLPTM1-204ENST00000585961 Q6ZUT4 128 aa12.3□□□□□ -0.44
CLPTM1-204ENST00000585961 NRACQ8N912 160 aa12.3□□□□□ -0.44
CLPTM1-204ENST00000585961 ZNF727A8MUV8 499 aa12.29□□□□□ -0.44
CLPTM1-204ENST00000585961 OSTCQ9NRP0 149 aa12.29□□□□□ -0.44
CLPTM1-204ENST00000585961 CSDC2Q9Y534 153 aaKnown RBP12.29□□□□□ -0.44
CLPTM1-204ENST00000585961 SUMO2P61956 95 aaKnown RBP12.28□□□□□ -0.44
CLPTM1-204ENST00000585961 C2orf48Q96LS8 159 aa12.28□□□□□ -0.44
CLPTM1-204ENST00000585961 KIR2DL4Q99706 377 aa12.28□□□□□ -0.44
CLPTM1-204ENST00000585961 SPAG11BQ08648 103 aa12.27□□□□□ -0.45
CLPTM1-204ENST00000585961 MRPL51Q4U2R6 128 aaKnown RBP12.26□□□□□ -0.45
CLPTM1-204ENST00000585961 PRR26Q8N8Z3 221 aa12.26□□□□□ -0.45
CLPTM1-204ENST00000585961 V9GYV3 84 aa12.26□□□□□ -0.45
CLPTM1-204ENST00000585961 FAM168BA1KXE4 195 aa12.25□□□□□ -0.45
CLPTM1-204ENST00000585961 RPL39P62891 51 aaKnown RBP12.25□□□□□ -0.45
CLPTM1-204ENST00000585961 SMAGPQ0VAQ4 97 aa12.25□□□□□ -0.45
CLPTM1-204ENST00000585961 A0A087WZ39 114 aa12.24□□□□□ -0.45
CLPTM1-204ENST00000585961 PPP1R17O96001 155 aa12.24□□□□□ -0.45
CLPTM1-204ENST00000585961 SRP19P09132 144 aaKnown RBP12.24□□□□□ -0.45
CLPTM1-204ENST00000585961 KRTAP11-1Q8IUC1 163 aa12.24□□□□□ -0.45
CLPTM1-204ENST00000585961 C10orf25Q5T742 122 aa12.23□□□□□ -0.45
CLPTM1-204ENST00000585961 ORAOV1Q8WV07 137 aa12.23□□□□□ -0.45
CLPTM1-204ENST00000585961 IGLV7-43P04211 117 aa12.22□□□□□ -0.45
CLPTM1-204ENST00000585961 RNF151Q2KHN1 245 aa12.22□□□□□ -0.45
CLPTM1-204ENST00000585961 FAM104BQ5XKR9 115 aa12.22□□□□□ -0.45
CLPTM1-204ENST00000585961 UNQ6190/PRO20217Q6UXQ8 127 aa12.22□□□□□ -0.45
CLPTM1-204ENST00000585961 TMEM18Q96B42 140 aa12.22□□□□□ -0.45
CLPTM1-204ENST00000585961 PPP1R2P9O14990 202 aa12.21□□□□□ -0.45
CLPTM1-204ENST00000585961 FAM104AQ969W3 186 aa12.21□□□□□ -0.45
CLPTM1-204ENST00000585961 TIMM21Q9BVV7 248 aa12.21□□□□□ -0.45
CLPTM1-204ENST00000585961 CKS2P33552 79 aa12.2□□□□□ -0.46
CLPTM1-204ENST00000585961 TMEM241Q24JQ0 296 aa12.2□□□□□ -0.46
CLPTM1-204ENST00000585961 GAGE2EQ4V326 116 aa12.2□□□□□ -0.46
CLPTM1-204ENST00000585961 DIRC1Q969H9 104 aa12.2□□□□□ -0.46
CLPTM1-204ENST00000585961 GAGE2DQ9UEU5 116 aa12.2□□□□□ -0.46
CLPTM1-204ENST00000585961 NAT8BQ9UHF3 227 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms