RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 XCL1P47992 114 aa8.94□□□□□ -0.98
SDF2-202ENST00000585428 RNASE7Q9H1E1 156 aaKnown RBP8.94□□□□□ -0.98
SDF2-202ENST00000585428 TRBV6-5A0A0K0K1A5 114 aa8.93□□□□□ -0.98
SDF2-202ENST00000585428 I3L3M4 83 aa8.93□□□□□ -0.98
SDF2-202ENST00000585428 EIF5AL1Q6IS14 154 aaKnown RBP8.93□□□□□ -0.98
SDF2-202ENST00000585428 FAM210AQ96ND0 272 aa8.93□□□□□ -0.98
SDF2-202ENST00000585428 PKIGQ9Y2B9 76 aa8.93□□□□□ -0.98
SDF2-202ENST00000585428 BCL2P10415 239 aa8.92□□□□□ -0.98
SDF2-202ENST00000585428 PMCHP20382 165 aa8.92□□□□□ -0.98
SDF2-202ENST00000585428 CD164L2Q6UWJ8 174 aa8.92□□□□□ -0.98
SDF2-202ENST00000585428 SMIM15Q7Z3B0 74 aa8.92□□□□□ -0.98
SDF2-202ENST00000585428 TMEM101Q96IK0 257 aa8.92□□□□□ -0.98
SDF2-202ENST00000585428 CARD19Q96LW7 228 aa8.92□□□□□ -0.98
SDF2-202ENST00000585428 CDC42SE2Q9NRR3 84 aa8.92□□□□□ -0.98
SDF2-202ENST00000585428 GAS8-AS1O95177 125 aa8.91□□□□□ -0.98
SDF2-202ENST00000585428 TSHBP01222 138 aa8.91□□□□□ -0.98
SDF2-202ENST00000585428 PTTG1IPP53801 180 aa8.91□□□□□ -0.98
SDF2-202ENST00000585428 SYCNQ0VAF6 134 aa8.91□□□□□ -0.98
SDF2-202ENST00000585428 MRPL52Q86TS9 123 aaKnown RBP8.91□□□□□ -0.98
SDF2-202ENST00000585428 BTF3L4Q96K17 158 aa8.91□□□□□ -0.98
SDF2-202ENST00000585428 ZNF561-AS1K7EIQ3 104 aa8.9□□□□□ -0.98
SDF2-202ENST00000585428 SS18Q15532 418 aa8.9□□□□□ -0.98
SDF2-202ENST00000585428 A0A1W2PNN7 141 aa8.89□□□□□ -0.99
SDF2-202ENST00000585428 POLR2KP53803 58 aaKnown RBP8.89□□□□□ -0.99
SDF2-202ENST00000585428 ZNF664Q8N3J9 261 aa8.89□□□□□ -0.99
SDF2-202ENST00000585428 TAGLN2P37802 199 aaKnown RBP8.88□□□□□ -0.99
SDF2-202ENST00000585428 ANAPC16Q96DE5 110 aa8.88□□□□□ -0.99
SDF2-202ENST00000585428 ST20Q9HBF5 79 aa8.88□□□□□ -0.99
SDF2-202ENST00000585428 IGLV4-69A0A075B6H9 119 aa8.87□□□□□ -0.99
SDF2-202ENST00000585428 TRBV27A0A0K0K1C4 114 aa8.87□□□□□ -0.99
SDF2-202ENST00000585428 LOC107984640A0A0U1RRK4 108 aa8.87□□□□□ -0.99
SDF2-202ENST00000585428 A8MWL6 223 aa8.87□□□□□ -0.99
SDF2-202ENST00000585428 CAMPP49913 170 aa8.87□□□□□ -0.99
SDF2-202ENST00000585428 FAM231DQ6ZW35 169 aa8.87□□□□□ -0.99
SDF2-202ENST00000585428 NUP35Q8NFH5 326 aa8.87□□□□□ -0.99
SDF2-202ENST00000585428 MRAP2Q96G30 205 aa8.87□□□□□ -0.99
SDF2-202ENST00000585428 GATCO43716 136 aaKnown RBP8.86□□□□□ -0.99
SDF2-202ENST00000585428 GAGE2BQ13066 116 aa8.86□□□□□ -0.99
SDF2-202ENST00000585428 ISOC2Q96AB3 205 aa8.86□□□□□ -0.99
SDF2-202ENST00000585428 TMEM242Q9NWH2 141 aa8.86□□□□□ -0.99
SDF2-202ENST00000585428 C1orf196B1AJZ1 125 aa8.85□□□□□ -0.99
SDF2-202ENST00000585428 RAB4AP20338 218 aa8.85□□□□□ -0.99
SDF2-202ENST00000585428 TMEM191AQ9H0A3 160 aa8.85□□□□□ -0.99
SDF2-202ENST00000585428 PSORS1C2Q9UIG4 136 aa8.85□□□□□ -0.99
SDF2-202ENST00000585428 CSDC2Q9Y534 153 aaKnown RBP8.85□□□□□ -0.99
SDF2-202ENST00000585428 TMEM250H0YL14 139 aa8.83□□□□□ -1
SDF2-202ENST00000585428 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.83□□□□□ -1
SDF2-202ENST00000585428 COX7A2LO14548 114 aa8.83□□□□□ -1
SDF2-202ENST00000585428 APOMO95445 188 aa8.83□□□□□ -1
SDF2-202ENST00000585428 MALP21145 153 aa8.83□□□□□ -1
SDF2-202ENST00000585428 C9orf116Q5BN46 136 aaPredicted RBP8.83□□□□□ -1
SDF2-202ENST00000585428 CT83Q5H943 113 aa8.83□□□□□ -1
SDF2-202ENST00000585428 SLC51BQ86UW2 128 aa8.83□□□□□ -1
SDF2-202ENST00000585428 C2orf48Q96LS8 159 aa8.83□□□□□ -1
SDF2-202ENST00000585428 C7orf77A4D0Y5 90 aa8.82□□□□□ -1
SDF2-202ENST00000585428 VCYO14598 125 aa8.82□□□□□ -1
SDF2-202ENST00000585428 CAMK2N2Q96S95 79 aa8.82□□□□□ -1
SDF2-202ENST00000585428 A0A1B0GUT8 65 aa8.81□□□□□ -1
SDF2-202ENST00000585428 MT-ND6P03923 174 aa8.81□□□□□ -1
SDF2-202ENST00000585428 RNF151Q2KHN1 245 aa8.81□□□□□ -1
SDF2-202ENST00000585428 TSKUQ8WUA8 353 aa8.81□□□□□ -1
SDF2-202ENST00000585428 UBE2D4Q9Y2X8 147 aa8.81□□□□□ -1
SDF2-202ENST00000585428 LPAP08519 4548 aa8.8□□□□□ -1
SDF2-202ENST00000585428 HIGD1CA8MV81 97 aa8.8□□□□□ -1
SDF2-202ENST00000585428 PHF5AQ7RTV0 110 aaKnown RBP8.8□□□□□ -1
SDF2-202ENST00000585428 AMN1Q8IY45 258 aa8.8□□□□□ -1
SDF2-202ENST00000585428 BORCS7Q96B45 105 aa8.8□□□□□ -1
SDF2-202ENST00000585428 C1orf137Q5JT78 98 aa8.79□□□□□ -1
SDF2-202ENST00000585428 C5orf38Q86SI9 138 aa8.79□□□□□ -1
SDF2-202ENST00000585428 TCTE3Q8IZS6 198 aa8.79□□□□□ -1
SDF2-202ENST00000585428 OPRPNQ99935 248 aaPredicted RBP8.79□□□□□ -1
SDF2-202ENST00000585428 TRAV13-1A0A0B4J241 112 aa8.78□□□□□ -1
SDF2-202ENST00000585428 RNASE13Q5GAN3 156 aaKnown RBP8.78□□□□□ -1
SDF2-202ENST00000585428 PRR26Q8N8Z3 221 aa8.78□□□□□ -1
SDF2-202ENST00000585428 NRACQ8N912 160 aa8.78□□□□□ -1
SDF2-202ENST00000585428 SMKR1H3BMG3 65 aa8.77□□□□□ -1.01
SDF2-202ENST00000585428 PPP1R17O96001 155 aa8.77□□□□□ -1.01
SDF2-202ENST00000585428 IGLV7-43P04211 117 aa8.77□□□□□ -1.01
SDF2-202ENST00000585428 FCER1GP30273 86 aa8.77□□□□□ -1.01
SDF2-202ENST00000585428 SUMO2P61956 95 aaKnown RBP8.77□□□□□ -1.01
SDF2-202ENST00000585428 SMAGPQ0VAQ4 97 aa8.77□□□□□ -1.01
SDF2-202ENST00000585428 LINC01551Q86U37 167 aa8.77□□□□□ -1.01
SDF2-202ENST00000585428 KRTAP11-1Q8IUC1 163 aa8.77□□□□□ -1.01
SDF2-202ENST00000585428 FAM104AQ969W3 186 aa8.77□□□□□ -1.01
SDF2-202ENST00000585428 TIMM21Q9BVV7 248 aa8.77□□□□□ -1.01
SDF2-202ENST00000585428 F8WDY8 70 aa8.76□□□□□ -1.01
SDF2-202ENST00000585428 BLOC1S1P78537 153 aa8.76□□□□□ -1.01
SDF2-202ENST00000585428 RPL18AQ02543 176 aaKnown RBP8.76□□□□□ -1.01
SDF2-202ENST00000585428 DIRC1Q969H9 104 aa8.76□□□□□ -1.01
SDF2-202ENST00000585428 KIR2DL4Q99706 377 aa8.76□□□□□ -1.01
SDF2-202ENST00000585428 OSTCQ9NRP0 149 aa8.76□□□□□ -1.01
SDF2-202ENST00000585428 MRPL35Q9NZE8 188 aaKnown RBP8.76□□□□□ -1.01
SDF2-202ENST00000585428 OR10D4PQ8NGN7 298 aa8.75□□□□□ -1.01
SDF2-202ENST00000585428 IGHV3OR16-9A0A0B4J2B5 98 aa8.74□□□□□ -1.01
SDF2-202ENST00000585428 LOC100996750A0A140TA64 210 aa8.74□□□□□ -1.01
SDF2-202ENST00000585428 SPAG11BQ08648 103 aa8.74□□□□□ -1.01
SDF2-202ENST00000585428 RIGQ13278 110 aa8.74□□□□□ -1.01
SDF2-202ENST00000585428 Q6ZUT4 128 aa8.74□□□□□ -1.01
SDF2-202ENST00000585428 IMMP2LQ96T52 175 aa8.74□□□□□ -1.01
SDF2-202ENST00000585428 KRTAP4-6Q9BYQ5 205 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 222 ms