RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 POLR2KP53803 58 aaKnown RBP5.56□□□□□ -1.52
GGA3-207ENST00000578896 TEX261Q6UWH6 196 aa5.56□□□□□ -1.52
GGA3-207ENST00000578896 FAM231DQ6ZW35 169 aa5.56□□□□□ -1.52
GGA3-207ENST00000578896 AMN1Q8IY45 258 aa5.56□□□□□ -1.52
GGA3-207ENST00000578896 CARD19Q96LW7 228 aa5.56□□□□□ -1.52
GGA3-207ENST00000578896 LINC01600Q96MT4 127 aa5.56□□□□□ -1.52
GGA3-207ENST00000578896 CDC42SE2Q9NRR3 84 aa5.56□□□□□ -1.52
GGA3-207ENST00000578896 LPAP08519 4548 aa5.55□□□□□ -1.52
GGA3-207ENST00000578896 hCG_2014768A0A024R1R8 64 aa5.55□□□□□ -1.52
GGA3-207ENST00000578896 HIGD1CA8MV81 97 aa5.55□□□□□ -1.52
GGA3-207ENST00000578896 TMEM250H0YL14 139 aa5.55□□□□□ -1.52
GGA3-207ENST00000578896 ZNF25P17030 456 aaPredicted RBP5.55□□□□□ -1.52
GGA3-207ENST00000578896 SYCNQ0VAF6 134 aa5.55□□□□□ -1.52
GGA3-207ENST00000578896 GAGE2BQ13066 116 aa5.55□□□□□ -1.52
GGA3-207ENST00000578896 SS18Q15532 418 aa5.55□□□□□ -1.52
GGA3-207ENST00000578896 MRAP2Q96G30 205 aa5.55□□□□□ -1.52
GGA3-207ENST00000578896 IGLV4-69A0A075B6H9 119 aa5.54□□□□□ -1.52
GGA3-207ENST00000578896 A0A1B0GUT8 65 aa5.54□□□□□ -1.52
GGA3-207ENST00000578896 A0A1W2PNN7 141 aa5.54□□□□□ -1.52
GGA3-207ENST00000578896 ZNF561-AS1K7EIQ3 104 aa5.54□□□□□ -1.52
GGA3-207ENST00000578896 BLOC1S1P78537 153 aa5.54□□□□□ -1.52
GGA3-207ENST00000578896 CD164L2Q6UWJ8 174 aa5.54□□□□□ -1.52
GGA3-207ENST00000578896 LINC01551Q86U37 167 aa5.54□□□□□ -1.52
GGA3-207ENST00000578896 ZNF664Q8N3J9 261 aa5.54□□□□□ -1.52
GGA3-207ENST00000578896 TSKUQ8WUA8 353 aa5.54□□□□□ -1.52
GGA3-207ENST00000578896 BORCS7Q96B45 105 aa5.54□□□□□ -1.52
GGA3-207ENST00000578896 SMIM7Q9BQ49 75 aa5.54□□□□□ -1.52
GGA3-207ENST00000578896 EIF5A2Q9GZV4 153 aaKnown RBP5.54□□□□□ -1.52
GGA3-207ENST00000578896 TMEM191AQ9H0A3 160 aa5.54□□□□□ -1.52
GGA3-207ENST00000578896 TRAV13-1A0A0B4J241 112 aa5.53□□□□□ -1.52
GGA3-207ENST00000578896 A0A0J9YXV3 536 aa5.53□□□□□ -1.52
GGA3-207ENST00000578896 TRBV27A0A0K0K1C4 114 aa5.53□□□□□ -1.52
GGA3-207ENST00000578896 C7orf77A4D0Y5 90 aa5.53□□□□□ -1.52
GGA3-207ENST00000578896 CAMPP49913 170 aa5.53□□□□□ -1.52
GGA3-207ENST00000578896 KRTAP10-8P60410 259 aa5.53□□□□□ -1.52
GGA3-207ENST00000578896 CT83Q5H943 113 aa5.53□□□□□ -1.52
GGA3-207ENST00000578896 C5orf38Q86SI9 138 aa5.53□□□□□ -1.52
GGA3-207ENST00000578896 MRPL52Q86TS9 123 aaKnown RBP5.53□□□□□ -1.52
GGA3-207ENST00000578896 ZNF727A8MUV8 499 aa5.52□□□□□ -1.53
GGA3-207ENST00000578896 VCYO14598 125 aa5.52□□□□□ -1.53
GGA3-207ENST00000578896 SRP19P09132 144 aaKnown RBP5.52□□□□□ -1.53
GGA3-207ENST00000578896 MALP21145 153 aa5.52□□□□□ -1.53
GGA3-207ENST00000578896 FCER1GP30273 86 aa5.52□□□□□ -1.53
GGA3-207ENST00000578896 PTTG1IPP53801 180 aa5.52□□□□□ -1.53
GGA3-207ENST00000578896 SRSF9Q13242 221 aaKnown RBP eCLIP5.52□□□□□ -1.53
GGA3-207ENST00000578896 SPINK6Q6UWN8 80 aa5.52□□□□□ -1.53
GGA3-207ENST00000578896 AKAP14Q86UN6 197 aa5.52□□□□□ -1.53
GGA3-207ENST00000578896 NRACQ8N912 160 aa5.52□□□□□ -1.53
GGA3-207ENST00000578896 NUP35Q8NFH5 326 aa5.52□□□□□ -1.53
GGA3-207ENST00000578896 OPRPNQ99935 248 aaPredicted RBP5.52□□□□□ -1.53
GGA3-207ENST00000578896 OSTCQ9NRP0 149 aa5.52□□□□□ -1.53
GGA3-207ENST00000578896 V9GYV3 84 aa5.52□□□□□ -1.53
GGA3-207ENST00000578896 COX7A2LO14548 114 aa5.51□□□□□ -1.53
GGA3-207ENST00000578896 Q6ZRP5 223 aa5.51□□□□□ -1.53
GGA3-207ENST00000578896 Q6ZUT4 128 aa5.51□□□□□ -1.53
GGA3-207ENST00000578896 PHF5AQ7RTV0 110 aaKnown RBP5.51□□□□□ -1.53
GGA3-207ENST00000578896 CAMK2N2Q96S95 79 aa5.51□□□□□ -1.53
GGA3-207ENST00000578896 LINC00474Q9P2X8 69 aa5.51□□□□□ -1.53
GGA3-207ENST00000578896 UBE2D4Q9Y2X8 147 aa5.51□□□□□ -1.53
GGA3-207ENST00000578896 LOC107984640A0A0U1RRK4 108 aa5.5□□□□□ -1.53
GGA3-207ENST00000578896 C1orf196B1AJZ1 125 aa5.5□□□□□ -1.53
GGA3-207ENST00000578896 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.5□□□□□ -1.53
GGA3-207ENST00000578896 SUMO2P61956 95 aaKnown RBP5.5□□□□□ -1.53
GGA3-207ENST00000578896 RPL39P62891 51 aaKnown RBP5.5□□□□□ -1.53
GGA3-207ENST00000578896 RPL18AQ02543 176 aaKnown RBP5.5□□□□□ -1.53
GGA3-207ENST00000578896 RIGQ13278 110 aa5.5□□□□□ -1.53
GGA3-207ENST00000578896 MRPL51Q4U2R6 128 aaKnown RBP5.5□□□□□ -1.53
GGA3-207ENST00000578896 C9orf116Q5BN46 136 aaPredicted RBP5.5□□□□□ -1.53
GGA3-207ENST00000578896 REG3GQ6UW15 175 aa5.5□□□□□ -1.53
GGA3-207ENST00000578896 FAM210AQ96ND0 272 aa5.5□□□□□ -1.53
GGA3-207ENST00000578896 C9JQL5 133 aa5.49□□□□□ -1.53
GGA3-207ENST00000578896 RPL23P62829 140 aaKnown RBP5.49□□□□□ -1.53
GGA3-207ENST00000578896 FAM104AQ969W3 186 aa5.49□□□□□ -1.53
GGA3-207ENST00000578896 ISOC2Q96AB3 205 aa5.49□□□□□ -1.53
GGA3-207ENST00000578896 PSORS1C2Q9UIG4 136 aa5.49□□□□□ -1.53
GGA3-207ENST00000578896 APOMO95445 188 aa5.48□□□□□ -1.53
GGA3-207ENST00000578896 SRSF3P84103 164 aaKnown RBP5.48□□□□□ -1.53
GGA3-207ENST00000578896 SPAG11BQ08648 103 aa5.48□□□□□ -1.53
GGA3-207ENST00000578896 ADIRFQ15847 76 aa5.48□□□□□ -1.53
GGA3-207ENST00000578896 TMEM241Q24JQ0 296 aa5.48□□□□□ -1.53
GGA3-207ENST00000578896 FAM104BQ5XKR9 115 aa5.48□□□□□ -1.53
GGA3-207ENST00000578896 KRTAP11-1Q8IUC1 163 aa5.48□□□□□ -1.53
GGA3-207ENST00000578896 KIR2DL4Q99706 377 aa5.48□□□□□ -1.53
GGA3-207ENST00000578896 FAM168BA1KXE4 195 aa5.47□□□□□ -1.53
GGA3-207ENST00000578896 TCAPO15273 167 aa5.47□□□□□ -1.53
GGA3-207ENST00000578896 MT-ND6P03923 174 aa5.47□□□□□ -1.53
GGA3-207ENST00000578896 CKS2P33552 79 aa5.47□□□□□ -1.53
GGA3-207ENST00000578896 C1orf137Q5JT78 98 aa5.47□□□□□ -1.53
GGA3-207ENST00000578896 C10orf25Q5T742 122 aa5.47□□□□□ -1.53
GGA3-207ENST00000578896 C2orf48Q96LS8 159 aa5.47□□□□□ -1.53
GGA3-207ENST00000578896 NAT8BQ9UHF3 227 aa5.47□□□□□ -1.53
GGA3-207ENST00000578896 PKIGQ9Y2B9 76 aa5.47□□□□□ -1.53
GGA3-207ENST00000578896 CSDC2Q9Y534 153 aaKnown RBP5.47□□□□□ -1.53
GGA3-207ENST00000578896 D6R8Y8 96 aa5.46□□□□□ -1.54
GGA3-207ENST00000578896 TNFRSF6BO95407 300 aa5.46□□□□□ -1.54
GGA3-207ENST00000578896 NPYP01303 97 aa5.46□□□□□ -1.54
GGA3-207ENST00000578896 FAM74A3Q4VXF1 159 aa5.46□□□□□ -1.54
GGA3-207ENST00000578896 MRPL54Q6P161 138 aaKnown RBP5.46□□□□□ -1.54
GGA3-207ENST00000578896 UNQ6190/PRO20217Q6UXQ8 127 aa5.46□□□□□ -1.54
GGA3-207ENST00000578896 ORAOV1Q8WV07 137 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms