RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ST20Q9HBF5 79 aa8.1□□□□□ -1.11
SF3B3-202ENST00000562722 SYCNQ0VAF6 134 aa8.09□□□□□ -1.11
SF3B3-202ENST00000562722 Q6ZRP5 223 aa8.09□□□□□ -1.11
SF3B3-202ENST00000562722 FAM231BA6NCW3 169 aa8.08□□□□□ -1.12
SF3B3-202ENST00000562722 A8MWL6 223 aa8.08□□□□□ -1.12
SF3B3-202ENST00000562722 TSHBP01222 138 aa8.08□□□□□ -1.12
SF3B3-202ENST00000562722 MALP21145 153 aa8.08□□□□□ -1.12
SF3B3-202ENST00000562722 CEBPGP53567 150 aa8.08□□□□□ -1.12
SF3B3-202ENST00000562722 GAGE2BQ13066 116 aa8.08□□□□□ -1.12
SF3B3-202ENST00000562722 SLC51BQ86UW2 128 aa8.08□□□□□ -1.12
SF3B3-202ENST00000562722 TRBV6-5A0A0K0K1A5 114 aa8.07□□□□□ -1.12
SF3B3-202ENST00000562722 CAMPP49913 170 aa8.07□□□□□ -1.12
SF3B3-202ENST00000562722 CD164L2Q6UWJ8 174 aa8.07□□□□□ -1.12
SF3B3-202ENST00000562722 ISOC2Q96AB3 205 aa8.07□□□□□ -1.12
SF3B3-202ENST00000562722 GAS8-AS1O95177 125 aa8.06□□□□□ -1.12
SF3B3-202ENST00000562722 ESDP10768 282 aa8.06□□□□□ -1.12
SF3B3-202ENST00000562722 ZNF664Q8N3J9 261 aa8.06□□□□□ -1.12
SF3B3-202ENST00000562722 CDC42SE2Q9NRR3 84 aa8.06□□□□□ -1.12
SF3B3-202ENST00000562722 IGLV4-69A0A075B6H9 119 aa8.05□□□□□ -1.12
SF3B3-202ENST00000562722 LOC107984640A0A0U1RRK4 108 aa8.05□□□□□ -1.12
SF3B3-202ENST00000562722 C7orf77A4D0Y5 90 aa8.05□□□□□ -1.12
SF3B3-202ENST00000562722 FCER1GP30273 86 aa8.05□□□□□ -1.12
SF3B3-202ENST00000562722 PTTG1IPP53801 180 aa8.05□□□□□ -1.12
SF3B3-202ENST00000562722 FAM231DQ6ZW35 169 aa8.05□□□□□ -1.12
SF3B3-202ENST00000562722 A0A1B0GUT8 65 aa8.04□□□□□ -1.12
SF3B3-202ENST00000562722 TMEM250H0YL14 139 aa8.04□□□□□ -1.12
SF3B3-202ENST00000562722 COX7A2LO14548 114 aa8.04□□□□□ -1.12
SF3B3-202ENST00000562722 KRTAP10-8P60410 259 aa8.04□□□□□ -1.12
SF3B3-202ENST00000562722 CT83Q5H943 113 aa8.04□□□□□ -1.12
SF3B3-202ENST00000562722 MRPL52Q86TS9 123 aaKnown RBP8.04□□□□□ -1.12
SF3B3-202ENST00000562722 FAM210AQ96ND0 272 aa8.04□□□□□ -1.12
SF3B3-202ENST00000562722 CAMK2N2Q96S95 79 aa8.04□□□□□ -1.12
SF3B3-202ENST00000562722 HIGD1CA8MV81 97 aa8.03□□□□□ -1.12
SF3B3-202ENST00000562722 C1orf196B1AJZ1 125 aa8.03□□□□□ -1.12
SF3B3-202ENST00000562722 RPL18AQ02543 176 aaKnown RBP8.03□□□□□ -1.12
SF3B3-202ENST00000562722 SMAGPQ0VAQ4 97 aa8.03□□□□□ -1.12
SF3B3-202ENST00000562722 SRSF9Q13242 221 aaKnown RBP eCLIP8.03□□□□□ -1.12
SF3B3-202ENST00000562722 TMEM191AQ9H0A3 160 aa8.03□□□□□ -1.12
SF3B3-202ENST00000562722 TRAV13-1A0A0B4J241 112 aa8.02□□□□□ -1.13
SF3B3-202ENST00000562722 TRBV27A0A0K0K1C4 114 aa8.02□□□□□ -1.13
SF3B3-202ENST00000562722 SMKR1H3BMG3 65 aa8.02□□□□□ -1.13
SF3B3-202ENST00000562722 MT-ND6P03923 174 aa8.02□□□□□ -1.13
SF3B3-202ENST00000562722 RAB4AP20338 218 aa8.02□□□□□ -1.13
SF3B3-202ENST00000562722 POLR2KP53803 58 aaKnown RBP8.02□□□□□ -1.13
SF3B3-202ENST00000562722 RNASE13Q5GAN3 156 aaKnown RBP8.02□□□□□ -1.13
SF3B3-202ENST00000562722 AMN1Q8IY45 258 aa8.02□□□□□ -1.13
SF3B3-202ENST00000562722 TCTE3Q8IZS6 198 aa8.02□□□□□ -1.13
SF3B3-202ENST00000562722 TSKUQ8WUA8 353 aa8.02□□□□□ -1.13
SF3B3-202ENST00000562722 A0A1W2PNN7 141 aa8.01□□□□□ -1.13
SF3B3-202ENST00000562722 VCYO14598 125 aa8.01□□□□□ -1.13
SF3B3-202ENST00000562722 APOMO95445 188 aa8.01□□□□□ -1.13
SF3B3-202ENST00000562722 BLOC1S1P78537 153 aa8.01□□□□□ -1.13
SF3B3-202ENST00000562722 NUP35Q8NFH5 326 aa8.01□□□□□ -1.13
SF3B3-202ENST00000562722 SMIM7Q9BQ49 75 aa8.01□□□□□ -1.13
SF3B3-202ENST00000562722 C9orf116Q5BN46 136 aaPredicted RBP8□□□□□ -1.13
SF3B3-202ENST00000562722 C5orf38Q86SI9 138 aa8□□□□□ -1.13
SF3B3-202ENST00000562722 KIR2DL4Q99706 377 aa8□□□□□ -1.13
SF3B3-202ENST00000562722 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.99□□□□□ -1.13
SF3B3-202ENST00000562722 PPP1R17O96001 155 aa7.99□□□□□ -1.13
SF3B3-202ENST00000562722 SPAG11BQ08648 103 aa7.99□□□□□ -1.13
SF3B3-202ENST00000562722 RIGQ13278 110 aa7.99□□□□□ -1.13
SF3B3-202ENST00000562722 C1orf137Q5JT78 98 aa7.99□□□□□ -1.13
SF3B3-202ENST00000562722 ALKAL2Q6UX46 152 aa7.99□□□□□ -1.13
SF3B3-202ENST00000562722 C2orf48Q96LS8 159 aa7.99□□□□□ -1.13
SF3B3-202ENST00000562722 EIF5A2Q9GZV4 153 aaKnown RBP7.99□□□□□ -1.13
SF3B3-202ENST00000562722 PSORS1C2Q9UIG4 136 aa7.99□□□□□ -1.13
SF3B3-202ENST00000562722 UBE2D4Q9Y2X8 147 aa7.99□□□□□ -1.13
SF3B3-202ENST00000562722 SUMO2P61956 95 aaKnown RBP7.98□□□□□ -1.13
SF3B3-202ENST00000562722 Q6ZUT4 128 aa7.98□□□□□ -1.13
SF3B3-202ENST00000562722 LINC01551Q86U37 167 aa7.98□□□□□ -1.13
SF3B3-202ENST00000562722 TMEM18Q96B42 140 aa7.98□□□□□ -1.13
SF3B3-202ENST00000562722 OPRPNQ99935 248 aaPredicted RBP7.98□□□□□ -1.13
SF3B3-202ENST00000562722 ZNF727A8MUV8 499 aa7.97□□□□□ -1.13
SF3B3-202ENST00000562722 PHF5AQ7RTV0 110 aaKnown RBP7.97□□□□□ -1.13
SF3B3-202ENST00000562722 OSTCQ9NRP0 149 aa7.97□□□□□ -1.13
SF3B3-202ENST00000562722 CSDC2Q9Y534 153 aaKnown RBP7.97□□□□□ -1.13
SF3B3-202ENST00000562722 PPP1R2P9O14990 202 aa7.96□□□□□ -1.14
SF3B3-202ENST00000562722 NRACQ8N912 160 aa7.96□□□□□ -1.14
SF3B3-202ENST00000562722 ORAOV1Q8WV07 137 aa7.95□□□□□ -1.14
SF3B3-202ENST00000562722 A0A087WZ39 114 aa7.94□□□□□ -1.14
SF3B3-202ENST00000562722 OR10D4PQ8NGN7 298 aa7.94□□□□□ -1.14
SF3B3-202ENST00000562722 DIRC1Q969H9 104 aa7.94□□□□□ -1.14
SF3B3-202ENST00000562722 NAT8BQ9UHF3 227 aa7.94□□□□□ -1.14
SF3B3-202ENST00000562722 V9GYV3 84 aa7.94□□□□□ -1.14
SF3B3-202ENST00000562722 RNF151Q2KHN1 245 aa7.93□□□□□ -1.14
SF3B3-202ENST00000562722 MRPL51Q4U2R6 128 aaKnown RBP7.93□□□□□ -1.14
SF3B3-202ENST00000562722 AKAP14Q86UN6 197 aa7.93□□□□□ -1.14
SF3B3-202ENST00000562722 IMMP2LQ96T52 175 aa7.93□□□□□ -1.14
SF3B3-202ENST00000562722 TIMM21Q9BVV7 248 aa7.93□□□□□ -1.14
SF3B3-202ENST00000562722 NDUFA1O15239 70 aa7.92□□□□□ -1.14
SF3B3-202ENST00000562722 IGLV7-43P04211 117 aa7.92□□□□□ -1.14
SF3B3-202ENST00000562722 CKS2P33552 79 aa7.92□□□□□ -1.14
SF3B3-202ENST00000562722 RPL39P62891 51 aaKnown RBP7.92□□□□□ -1.14
SF3B3-202ENST00000562722 FAM104BQ5XKR9 115 aa7.92□□□□□ -1.14
SF3B3-202ENST00000562722 FAM19A5Q7Z5A7 132 aaPredicted RBP7.92□□□□□ -1.14
SF3B3-202ENST00000562722 PRR26Q8N8Z3 221 aa7.92□□□□□ -1.14
SF3B3-202ENST00000562722 C20orf78Q9BR46 151 aa7.92□□□□□ -1.14
SF3B3-202ENST00000562722 MRPL35Q9NZE8 188 aaKnown RBP7.92□□□□□ -1.14
SF3B3-202ENST00000562722 LPAP08519 4548 aa7.91□□□□□ -1.14
SF3B3-202ENST00000562722 FAM168BA1KXE4 195 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms