RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 PKIGQ9Y2B9 76 aa9.52□□□□□ -0.89
RAB5C-205ENST00000550013 TRBV6-5A0A0K0K1A5 114 aa9.5□□□□□ -0.89
RAB5C-205ENST00000550013 ZNF561-AS1K7EIQ3 104 aa9.5□□□□□ -0.89
RAB5C-205ENST00000550013 PTTG1IPP53801 180 aa9.5□□□□□ -0.89
RAB5C-205ENST00000550013 SS18Q15532 418 aa9.5□□□□□ -0.89
RAB5C-205ENST00000550013 LPAP08519 4548 aa9.49□□□□□ -0.89
RAB5C-205ENST00000550013 GATCO43716 136 aaKnown RBP9.49□□□□□ -0.89
RAB5C-205ENST00000550013 CAMPP49913 170 aa9.49□□□□□ -0.89
RAB5C-205ENST00000550013 GAGE2BQ13066 116 aa9.49□□□□□ -0.89
RAB5C-205ENST00000550013 CD164L2Q6UWJ8 174 aa9.49□□□□□ -0.89
RAB5C-205ENST00000550013 MRAP2Q96G30 205 aa9.49□□□□□ -0.89
RAB5C-205ENST00000550013 ST20Q9HBF5 79 aa9.49□□□□□ -0.89
RAB5C-205ENST00000550013 CDC42SE2Q9NRR3 84 aa9.49□□□□□ -0.89
RAB5C-205ENST00000550013 LOC107984640A0A0U1RRK4 108 aa9.48□□□□□ -0.89
RAB5C-205ENST00000550013 A0A1W2PNN7 141 aa9.48□□□□□ -0.89
RAB5C-205ENST00000550013 MRPL52Q86TS9 123 aaKnown RBP9.48□□□□□ -0.89
RAB5C-205ENST00000550013 ZNF664Q8N3J9 261 aa9.48□□□□□ -0.89
RAB5C-205ENST00000550013 IGLV4-69A0A075B6H9 119 aa9.47□□□□□ -0.89
RAB5C-205ENST00000550013 TAGLN2P37802 199 aaKnown RBP9.47□□□□□ -0.89
RAB5C-205ENST00000550013 A8MWL6 223 aa9.46□□□□□ -0.9
RAB5C-205ENST00000550013 POLR2KP53803 58 aaKnown RBP9.46□□□□□ -0.9
RAB5C-205ENST00000550013 C7orf77A4D0Y5 90 aa9.45□□□□□ -0.9
RAB5C-205ENST00000550013 FAM231DQ6ZW35 169 aa9.45□□□□□ -0.9
RAB5C-205ENST00000550013 ISOC2Q96AB3 205 aa9.45□□□□□ -0.9
RAB5C-205ENST00000550013 PSORS1C2Q9UIG4 136 aa9.45□□□□□ -0.9
RAB5C-205ENST00000550013 TRBV27A0A0K0K1C4 114 aa9.44□□□□□ -0.9
RAB5C-205ENST00000550013 COX7A2LO14548 114 aa9.44□□□□□ -0.9
RAB5C-205ENST00000550013 MALP21145 153 aa9.44□□□□□ -0.9
RAB5C-205ENST00000550013 RNASE13Q5GAN3 156 aaKnown RBP9.44□□□□□ -0.9
RAB5C-205ENST00000550013 SLC51BQ86UW2 128 aa9.44□□□□□ -0.9
RAB5C-205ENST00000550013 NUP35Q8NFH5 326 aa9.44□□□□□ -0.9
RAB5C-205ENST00000550013 CAMK2N2Q96S95 79 aa9.44□□□□□ -0.9
RAB5C-205ENST00000550013 MT-ND6P03923 174 aa9.43□□□□□ -0.9
RAB5C-205ENST00000550013 C9orf116Q5BN46 136 aaPredicted RBP9.43□□□□□ -0.9
RAB5C-205ENST00000550013 BORCS7Q96B45 105 aa9.43□□□□□ -0.9
RAB5C-205ENST00000550013 TMEM191AQ9H0A3 160 aa9.43□□□□□ -0.9
RAB5C-205ENST00000550013 C1orf196B1AJZ1 125 aa9.42□□□□□ -0.9
RAB5C-205ENST00000550013 SMKR1H3BMG3 65 aa9.42□□□□□ -0.9
RAB5C-205ENST00000550013 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.42□□□□□ -0.9
RAB5C-205ENST00000550013 APOMO95445 188 aa9.42□□□□□ -0.9
RAB5C-205ENST00000550013 RAB4AP20338 218 aa9.42□□□□□ -0.9
RAB5C-205ENST00000550013 CT83Q5H943 113 aa9.42□□□□□ -0.9
RAB5C-205ENST00000550013 PHF5AQ7RTV0 110 aaKnown RBP9.42□□□□□ -0.9
RAB5C-205ENST00000550013 AMN1Q8IY45 258 aa9.42□□□□□ -0.9
RAB5C-205ENST00000550013 FAM210AQ96ND0 272 aa9.42□□□□□ -0.9
RAB5C-205ENST00000550013 TRAV13-1A0A0B4J241 112 aa9.41□□□□□ -0.9
RAB5C-205ENST00000550013 A0A1B0GUT8 65 aa9.41□□□□□ -0.9
RAB5C-205ENST00000550013 TMEM250H0YL14 139 aa9.41□□□□□ -0.9
RAB5C-205ENST00000550013 CEBPGP53567 150 aa9.41□□□□□ -0.9
RAB5C-205ENST00000550013 RPL18AQ02543 176 aaKnown RBP9.41□□□□□ -0.9
RAB5C-205ENST00000550013 C5orf38Q86SI9 138 aa9.41□□□□□ -0.9
RAB5C-205ENST00000550013 OPRPNQ99935 248 aaPredicted RBP9.41□□□□□ -0.9
RAB5C-205ENST00000550013 HIGD1CA8MV81 97 aa9.4□□□□□ -0.9
RAB5C-205ENST00000550013 FCER1GP30273 86 aa9.4□□□□□ -0.9
RAB5C-205ENST00000550013 C1orf137Q5JT78 98 aa9.4□□□□□ -0.9
RAB5C-205ENST00000550013 UBE2D4Q9Y2X8 147 aa9.4□□□□□ -0.9
RAB5C-205ENST00000550013 VCYO14598 125 aa9.39□□□□□ -0.91
RAB5C-205ENST00000550013 Q6ZUT4 128 aa9.39□□□□□ -0.91
RAB5C-205ENST00000550013 TSKUQ8WUA8 353 aa9.39□□□□□ -0.91
RAB5C-205ENST00000550013 C2orf48Q96LS8 159 aa9.39□□□□□ -0.91
RAB5C-205ENST00000550013 CSDC2Q9Y534 153 aaKnown RBP9.39□□□□□ -0.91
RAB5C-205ENST00000550013 SPAG11BQ08648 103 aa9.38□□□□□ -0.91
RAB5C-205ENST00000550013 TCTE3Q8IZS6 198 aa9.38□□□□□ -0.91
RAB5C-205ENST00000550013 PRR26Q8N8Z3 221 aa9.38□□□□□ -0.91
RAB5C-205ENST00000550013 NRACQ8N912 160 aa9.38□□□□□ -0.91
RAB5C-205ENST00000550013 LINC01551Q86U37 167 aa9.37□□□□□ -0.91
RAB5C-205ENST00000550013 SUMO2P61956 95 aaKnown RBP9.36□□□□□ -0.91
RAB5C-205ENST00000550013 RNF151Q2KHN1 245 aa9.36□□□□□ -0.91
RAB5C-205ENST00000550013 ALKAL2Q6UX46 152 aa9.36□□□□□ -0.91
RAB5C-205ENST00000550013 KRTAP11-1Q8IUC1 163 aa9.36□□□□□ -0.91
RAB5C-205ENST00000550013 SMIM7Q9BQ49 75 aa9.36□□□□□ -0.91
RAB5C-205ENST00000550013 FAM168BA1KXE4 195 aa9.35□□□□□ -0.91
RAB5C-205ENST00000550013 IGLV7-43P04211 117 aa9.35□□□□□ -0.91
RAB5C-205ENST00000550013 SMAGPQ0VAQ4 97 aa9.35□□□□□ -0.91
RAB5C-205ENST00000550013 KIR2DL4Q99706 377 aa9.35□□□□□ -0.91
RAB5C-205ENST00000550013 OSTCQ9NRP0 149 aa9.35□□□□□ -0.91
RAB5C-205ENST00000550013 BLOC1S1P78537 153 aa9.34□□□□□ -0.91
RAB5C-205ENST00000550013 RIGQ13278 110 aa9.34□□□□□ -0.91
RAB5C-205ENST00000550013 OR10D4PQ8NGN7 298 aa9.34□□□□□ -0.91
RAB5C-205ENST00000550013 DIRC1Q969H9 104 aa9.34□□□□□ -0.91
RAB5C-205ENST00000550013 TIMM21Q9BVV7 248 aa9.34□□□□□ -0.91
RAB5C-205ENST00000550013 RPL39P62891 51 aaKnown RBP9.33□□□□□ -0.92
RAB5C-205ENST00000550013 C10orf25Q5T742 122 aa9.33□□□□□ -0.92
RAB5C-205ENST00000550013 ORAOV1Q8WV07 137 aa9.33□□□□□ -0.92
RAB5C-205ENST00000550013 FAM104AQ969W3 186 aa9.33□□□□□ -0.92
RAB5C-205ENST00000550013 MRPL35Q9NZE8 188 aaKnown RBP9.33□□□□□ -0.92
RAB5C-205ENST00000550013 V9GYV3 84 aa9.33□□□□□ -0.92
RAB5C-205ENST00000550013 A0A087WZ39 114 aa9.32□□□□□ -0.92
RAB5C-205ENST00000550013 ZNF727A8MUV8 499 aa9.32□□□□□ -0.92
RAB5C-205ENST00000550013 H0Y9J4 135 aa9.32□□□□□ -0.92
RAB5C-205ENST00000550013 PPP1R17O96001 155 aa9.32□□□□□ -0.92
RAB5C-205ENST00000550013 MRPL51Q4U2R6 128 aaKnown RBP9.32□□□□□ -0.92
RAB5C-205ENST00000550013 PPP1R2P9O14990 202 aa9.31□□□□□ -0.92
RAB5C-205ENST00000550013 FAM19A5Q7Z5A7 132 aaPredicted RBP9.31□□□□□ -0.92
RAB5C-205ENST00000550013 EIF5A2Q9GZV4 153 aaKnown RBP9.31□□□□□ -0.92
RAB5C-205ENST00000550013 IGHV3OR16-9A0A0B4J2B5 98 aa9.3□□□□□ -0.92
RAB5C-205ENST00000550013 NDUFA1O15239 70 aa9.3□□□□□ -0.92
RAB5C-205ENST00000550013 FAM104BQ5XKR9 115 aa9.3□□□□□ -0.92
RAB5C-205ENST00000550013 UNQ6190/PRO20217Q6UXQ8 127 aa9.3□□□□□ -0.92
RAB5C-205ENST00000550013 TMEM18Q96B42 140 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms