RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 PLAC8Q9NZF1 115 aa6.25□□□□□ -1.41
CCDC170-202ENST00000537358 LRP1Q07954 4544 aaKnown RBP6.24□□□□□ -1.41
CCDC170-202ENST00000537358 GVQW2A0A096LPI5 108 aaPredicted RBP6.24□□□□□ -1.41
CCDC170-202ENST00000537358 TRBV6-5A0A0K0K1A5 114 aa6.24□□□□□ -1.41
CCDC170-202ENST00000537358 A0A1B0GUT8 65 aa6.24□□□□□ -1.41
CCDC170-202ENST00000537358 XCL1P47992 114 aa6.24□□□□□ -1.41
CCDC170-202ENST00000537358 ALKAL2Q6UX46 152 aa6.24□□□□□ -1.41
CCDC170-202ENST00000537358 SMIM7Q9BQ49 75 aa6.24□□□□□ -1.41
CCDC170-202ENST00000537358 IGHV1-58A0A0C4DH39 117 aa6.23□□□□□ -1.41
CCDC170-202ENST00000537358 FAM231BA6NCW3 169 aa6.23□□□□□ -1.41
CCDC170-202ENST00000537358 ZNF561-AS1K7EIQ3 104 aa6.23□□□□□ -1.41
CCDC170-202ENST00000537358 PHOX2AO14813 284 aa6.23□□□□□ -1.41
CCDC170-202ENST00000537358 PPP1R17O96001 155 aa6.23□□□□□ -1.41
CCDC170-202ENST00000537358 FOXA3P55318 350 aaPredicted RBP6.23□□□□□ -1.41
CCDC170-202ENST00000537358 STPG4Q8N801 248 aa6.23□□□□□ -1.41
CCDC170-202ENST00000537358 TSKUQ8WUA8 353 aa6.23□□□□□ -1.41
CCDC170-202ENST00000537358 TMEM191AQ9H0A3 160 aa6.23□□□□□ -1.41
CCDC170-202ENST00000537358 LINC00959A0A1B0GUT2 108 aa6.22□□□□□ -1.41
CCDC170-202ENST00000537358 C7orf77A4D0Y5 90 aa6.22□□□□□ -1.41
CCDC170-202ENST00000537358 ZNF727A8MUV8 499 aa6.22□□□□□ -1.41
CCDC170-202ENST00000537358 HIGD1CA8MV81 97 aa6.22□□□□□ -1.41
CCDC170-202ENST00000537358 CCL25O15444 150 aa6.22□□□□□ -1.41
CCDC170-202ENST00000537358 FCER1GP30273 86 aa6.22□□□□□ -1.41
CCDC170-202ENST00000537358 FOXI1Q12951 378 aa6.22□□□□□ -1.41
CCDC170-202ENST00000537358 RIGQ13278 110 aa6.22□□□□□ -1.41
CCDC170-202ENST00000537358 PRSS3P2Q8NHM4 247 aa6.22□□□□□ -1.41
CCDC170-202ENST00000537358 ISOC2Q96AB3 205 aa6.22□□□□□ -1.41
CCDC170-202ENST00000537358 CARD19Q96LW7 228 aa6.22□□□□□ -1.41
CCDC170-202ENST00000537358 TMEM242Q9NWH2 141 aa6.22□□□□□ -1.41
CCDC170-202ENST00000537358 TSHBP01222 138 aa6.21□□□□□ -1.42
CCDC170-202ENST00000537358 ESDP10768 282 aa6.21□□□□□ -1.42
CCDC170-202ENST00000537358 MALP21145 153 aa6.21□□□□□ -1.42
CCDC170-202ENST00000537358 CD164L2Q6UWJ8 174 aa6.21□□□□□ -1.42
CCDC170-202ENST00000537358 MRPL52Q86TS9 123 aaKnown RBP6.21□□□□□ -1.42
CCDC170-202ENST00000537358 LINC01551Q86U37 167 aa6.21□□□□□ -1.42
CCDC170-202ENST00000537358 ZNF664Q8N3J9 261 aa6.21□□□□□ -1.42
CCDC170-202ENST00000537358 LYPD6BQ8NI32 183 aa6.21□□□□□ -1.42
CCDC170-202ENST00000537358 KIR2DL4Q99706 377 aa6.21□□□□□ -1.42
CCDC170-202ENST00000537358 OSTCQ9NRP0 149 aa6.21□□□□□ -1.42
CCDC170-202ENST00000537358 FAT3Q8TDW7 4589 aa6.21□□□□□ -1.42
CCDC170-202ENST00000537358 TRBV27A0A0K0K1C4 114 aa6.2□□□□□ -1.42
CCDC170-202ENST00000537358 C1orf196B1AJZ1 125 aa6.2□□□□□ -1.42
CCDC170-202ENST00000537358 VCYO14598 125 aa6.2□□□□□ -1.42
CCDC170-202ENST00000537358 TMEM18Q96B42 140 aa6.2□□□□□ -1.42
CCDC170-202ENST00000537358 PKHD1L1Q86WI1 4243 aa6.2□□□□□ -1.42
CCDC170-202ENST00000537358 A0A096LNI7 61 aa6.19□□□□□ -1.42
CCDC170-202ENST00000537358 PPP1R2P9O14990 202 aa6.19□□□□□ -1.42
CCDC170-202ENST00000537358 RAB4AP20338 218 aa6.19□□□□□ -1.42
CCDC170-202ENST00000537358 POLR2KP53803 58 aaKnown RBP6.19□□□□□ -1.42
CCDC170-202ENST00000537358 PRR3P79522 188 aaKnown RBP6.19□□□□□ -1.42
CCDC170-202ENST00000537358 SYCNQ0VAF6 134 aa6.19□□□□□ -1.42
CCDC170-202ENST00000537358 AMN1Q8IY45 258 aa6.19□□□□□ -1.42
CCDC170-202ENST00000537358 CDC42SE2Q9NRR3 84 aa6.19□□□□□ -1.42
CCDC170-202ENST00000537358 hCG_2014768A0A024R1R8 64 aa6.18□□□□□ -1.42
CCDC170-202ENST00000537358 COX7A2LO14548 114 aa6.18□□□□□ -1.42
CCDC170-202ENST00000537358 TCAPO15273 167 aa6.18□□□□□ -1.42
CCDC170-202ENST00000537358 APOMO95445 188 aa6.18□□□□□ -1.42
CCDC170-202ENST00000537358 MT1HL1P0DM35 61 aa6.18□□□□□ -1.42
CCDC170-202ENST00000537358 CAMPP49913 170 aa6.18□□□□□ -1.42
CCDC170-202ENST00000537358 SUMO2P61956 95 aaKnown RBP6.18□□□□□ -1.42
CCDC170-202ENST00000537358 FAM74A3Q4VXF1 159 aa6.18□□□□□ -1.42
CCDC170-202ENST00000537358 REG3GQ6UW15 175 aa6.18□□□□□ -1.42
CCDC170-202ENST00000537358 LINC00526Q96FQ7 95 aa6.18□□□□□ -1.42
CCDC170-202ENST00000537358 NAT8BQ9UHF3 227 aa6.18□□□□□ -1.42
CCDC170-202ENST00000537358 LOC107984640A0A0U1RRK4 108 aa6.17□□□□□ -1.42
CCDC170-202ENST00000537358 GAS8-AS1O95177 125 aa6.17□□□□□ -1.42
CCDC170-202ENST00000537358 TMEM241Q24JQ0 296 aa6.17□□□□□ -1.42
CCDC170-202ENST00000537358 Q6ZRP5 223 aa6.17□□□□□ -1.42
CCDC170-202ENST00000537358 NUP35Q8NFH5 326 aa6.17□□□□□ -1.42
CCDC170-202ENST00000537358 CSDC2Q9Y534 153 aaKnown RBP6.17□□□□□ -1.42
CCDC170-202ENST00000537358 IGLV4-69A0A075B6H9 119 aa6.16□□□□□ -1.42
CCDC170-202ENST00000537358 TRAV13-1A0A0B4J241 112 aa6.16□□□□□ -1.42
CCDC170-202ENST00000537358 A0A1B0GW15 77 aa6.16□□□□□ -1.42
CCDC170-202ENST00000537358 SMKR1H3BMG3 65 aa6.16□□□□□ -1.42
CCDC170-202ENST00000537358 SRP19P09132 144 aaKnown RBP6.16□□□□□ -1.42
CCDC170-202ENST00000537358 GAGE2BQ13066 116 aa6.16□□□□□ -1.42
CCDC170-202ENST00000537358 ADIRFQ15847 76 aa6.16□□□□□ -1.42
CCDC170-202ENST00000537358 SPINK6Q6UWN8 80 aa6.16□□□□□ -1.42
CCDC170-202ENST00000537358 CAMK2N2Q96S95 79 aa6.16□□□□□ -1.42
CCDC170-202ENST00000537358 V9GYV3 84 aa6.16□□□□□ -1.42
CCDC170-202ENST00000537358 LINC00862A6NCI5 91 aa6.15□□□□□ -1.42
CCDC170-202ENST00000537358 S100A8P05109 93 aa6.15□□□□□ -1.42
CCDC170-202ENST00000537358 PTTG1IPP53801 180 aa6.15□□□□□ -1.42
CCDC170-202ENST00000537358 LINC01600Q96MT4 127 aa6.15□□□□□ -1.42
CCDC170-202ENST00000537358 NAT8Q9UHE5 227 aa6.15□□□□□ -1.42
CCDC170-202ENST00000537358 UBE2D4Q9Y2X8 147 aa6.15□□□□□ -1.42
CCDC170-202ENST00000537358 F8W036 122 aa6.14□□□□□ -1.43
CCDC170-202ENST00000537358 CKS2P33552 79 aa6.14□□□□□ -1.43
CCDC170-202ENST00000537358 MRPL51Q4U2R6 128 aaKnown RBP6.14□□□□□ -1.43
CCDC170-202ENST00000537358 FAM104BQ5XKR9 115 aa6.14□□□□□ -1.43
CCDC170-202ENST00000537358 NRACQ8N912 160 aa6.14□□□□□ -1.43
CCDC170-202ENST00000537358 C2orf48Q96LS8 159 aa6.14□□□□□ -1.43
CCDC170-202ENST00000537358 C20orf78Q9BR46 151 aa6.14□□□□□ -1.43
CCDC170-202ENST00000537358 TIMM21Q9BVV7 248 aa6.14□□□□□ -1.43
CCDC170-202ENST00000537358 RPL23P62829 140 aaKnown RBP6.13□□□□□ -1.43
CCDC170-202ENST00000537358 SRSF3P84103 164 aaKnown RBP6.13□□□□□ -1.43
CCDC170-202ENST00000537358 RPL18AQ02543 176 aaKnown RBP6.13□□□□□ -1.43
CCDC170-202ENST00000537358 PEA15Q15121 130 aa6.13□□□□□ -1.43
CCDC170-202ENST00000537358 RNASE13Q5GAN3 156 aaKnown RBP6.13□□□□□ -1.43
CCDC170-202ENST00000537358 C5orf38Q86SI9 138 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms