RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 M0R381 172 aa8.11□□□□□ -1.11
CAPN1-223ENST00000533079 HSBP1O75506 76 aa8.11□□□□□ -1.11
CAPN1-223ENST00000533079 MT1HL1P0DM35 61 aa8.11□□□□□ -1.11
CAPN1-223ENST00000533079 IQCJQ1A5X6 159 aa8.11□□□□□ -1.11
CAPN1-223ENST00000533079 PYY3Q5JQD4 70 aa8.11□□□□□ -1.11
CAPN1-223ENST00000533079 BAALCQ8WXS3 180 aa8.11□□□□□ -1.11
CAPN1-223ENST00000533079 AP1S3Q96PC3 154 aa8.11□□□□□ -1.11
CAPN1-223ENST00000533079 C12orf57Q99622 126 aa8.11□□□□□ -1.11
CAPN1-223ENST00000533079 SAMD10Q9BYL1 202 aa8.11□□□□□ -1.11
CAPN1-223ENST00000533079 LRP2P98164 4655 aa8.11□□□□□ -1.11
CAPN1-223ENST00000533079 AMTP48728 403 aa8.1□□□□□ -1.11
CAPN1-223ENST00000533079 SSTP61278 116 aa8.1□□□□□ -1.11
CAPN1-223ENST00000533079 Q6ZRU5 148 aa8.1□□□□□ -1.11
CAPN1-223ENST00000533079 PRSS3P2Q8NHM4 247 aa8.1□□□□□ -1.11
CAPN1-223ENST00000533079 TNFRSF6BO95407 300 aa8.09□□□□□ -1.11
CAPN1-223ENST00000533079 RPL32P62910 135 aaKnown RBP8.09□□□□□ -1.11
CAPN1-223ENST00000533079 C14orf177Q52M58 125 aa8.09□□□□□ -1.11
CAPN1-223ENST00000533079 CFAP126Q5VTH2 177 aa8.09□□□□□ -1.11
CAPN1-223ENST00000533079 DAZ4Q86SG3 579 aaKnown RBP8.09□□□□□ -1.11
CAPN1-223ENST00000533079 NRACQ8N912 160 aa8.09□□□□□ -1.11
CAPN1-223ENST00000533079 C20orf78Q9BR46 151 aa8.09□□□□□ -1.11
CAPN1-223ENST00000533079 MAP1LC3AQ9H492 121 aa8.09□□□□□ -1.11
CAPN1-223ENST00000533079 NXT2Q9NPJ8 142 aaKnown RBP8.09□□□□□ -1.11
CAPN1-223ENST00000533079 DAZ3Q9NR90 486 aaKnown RBP8.09□□□□□ -1.11
CAPN1-223ENST00000533079 AP5S1Q9NUS5 200 aa8.09□□□□□ -1.11
CAPN1-223ENST00000533079 K7EMI3 77 aa8.08□□□□□ -1.12
CAPN1-223ENST00000533079 NPYP01303 97 aa8.08□□□□□ -1.12
CAPN1-223ENST00000533079 SMIM17P0DL12 118 aa8.08□□□□□ -1.12
CAPN1-223ENST00000533079 HNRNPA3P51991 378 aaKnown RBP8.08□□□□□ -1.12
CAPN1-223ENST00000533079 ZNF876PQ49A33 203 aa8.08□□□□□ -1.12
CAPN1-223ENST00000533079 RNASEKQ6P5S7 137 aaKnown RBP8.08□□□□□ -1.12
CAPN1-223ENST00000533079 FA2HQ7L5A8 372 aa8.08□□□□□ -1.12
CAPN1-223ENST00000533079 Q8N3U1 123 aa8.08□□□□□ -1.12
CAPN1-223ENST00000533079 C14orf178Q8N769 122 aaPredicted RBP8.08□□□□□ -1.12
CAPN1-223ENST00000533079 LINC00694P0DN24 101 aa8.07□□□□□ -1.12
CAPN1-223ENST00000533079 IFI27P40305 119 aaPredicted RBP8.07□□□□□ -1.12
CAPN1-223ENST00000533079 Q8N8P6 123 aa8.07□□□□□ -1.12
CAPN1-223ENST00000533079 IGKV2D-24A0A075B6R9 120 aa8.06□□□□□ -1.12
CAPN1-223ENST00000533079 A8MWV9 139 aa8.06□□□□□ -1.12
CAPN1-223ENST00000533079 FAM19A2Q8N3H0 131 aa8.06□□□□□ -1.12
CAPN1-223ENST00000533079 CHCHD7Q9BUK0 85 aa8.06□□□□□ -1.12
CAPN1-223ENST00000533079 IGHV1-24A0A0C4DH33 117 aa8.05□□□□□ -1.12
CAPN1-223ENST00000533079 TRBV6-5A0A0K0K1A5 114 aa8.05□□□□□ -1.12
CAPN1-223ENST00000533079 SMKR1H3BMG3 65 aa8.05□□□□□ -1.12
CAPN1-223ENST00000533079 ZFP2Q6ZN57 461 aa8.05□□□□□ -1.12
CAPN1-223ENST00000533079 NIT2Q9NQR4 276 aa8.05□□□□□ -1.12
CAPN1-223ENST00000533079 HSPB8Q9UJY1 196 aa8.05□□□□□ -1.12
CAPN1-223ENST00000533079 LOC389332A0A1B0GUA5 103 aa8.04□□□□□ -1.12
CAPN1-223ENST00000533079 GAS8-AS1O95177 125 aa8.04□□□□□ -1.12
CAPN1-223ENST00000533079 LEPROTL1O95214 131 aa8.04□□□□□ -1.12
CAPN1-223ENST00000533079 NCR2O95944 276 aa8.04□□□□□ -1.12
CAPN1-223ENST00000533079 SUMO2P61956 95 aaKnown RBP8.04□□□□□ -1.12
CAPN1-223ENST00000533079 TNXBP22105 4242 aa8.03□□□□□ -1.12
CAPN1-223ENST00000533079 IGHV3-73A0A0B4J1V6 119 aa8.03□□□□□ -1.12
CAPN1-223ENST00000533079 C3orf79P0CE67 100 aa8.03□□□□□ -1.12
CAPN1-223ENST00000533079 FCER1GP30273 86 aa8.03□□□□□ -1.12
CAPN1-223ENST00000533079 S100A12P80511 92 aa8.03□□□□□ -1.12
CAPN1-223ENST00000533079 UFSP1Q6NVU6 142 aa8.03□□□□□ -1.12
CAPN1-223ENST00000533079 GAGE12JA6NER3 117 aa8.02□□□□□ -1.13
CAPN1-223ENST00000533079 LINC01549A6NIU2 74 aa8.02□□□□□ -1.13
CAPN1-223ENST00000533079 H7C1H1 209 aa8.02□□□□□ -1.13
CAPN1-223ENST00000533079 M0QY20 66 aa8.02□□□□□ -1.13
CAPN1-223ENST00000533079 RHODO00212 210 aa8.02□□□□□ -1.13
CAPN1-223ENST00000533079 SCGB1D1O95968 90 aa8.02□□□□□ -1.13
CAPN1-223ENST00000533079 HBDP02042 147 aa8.02□□□□□ -1.13
CAPN1-223ENST00000533079 G0S2P27469 103 aa8.02□□□□□ -1.13
CAPN1-223ENST00000533079 POLR2KP53803 58 aaKnown RBP8.02□□□□□ -1.13
CAPN1-223ENST00000533079 GAGE1Q13065 139 aa8.02□□□□□ -1.13
CAPN1-223ENST00000533079 GAGE4Q13068 117 aa8.02□□□□□ -1.13
CAPN1-223ENST00000533079 GAGE5Q13069 117 aa8.02□□□□□ -1.13
CAPN1-223ENST00000533079 GAGE13Q4V321 117 aa8.02□□□□□ -1.13
CAPN1-223ENST00000533079 PET117Q6UWS5 81 aa8.02□□□□□ -1.13
CAPN1-223ENST00000533079 SMIM2Q9BVW6 85 aa8.02□□□□□ -1.13
CAPN1-223ENST00000533079 JPT2Q9H910 190 aa8.02□□□□□ -1.13
CAPN1-223ENST00000533079 A0A087WX48 190 aa8.01□□□□□ -1.13
CAPN1-223ENST00000533079 A0A096LNJ9 63 aa8.01□□□□□ -1.13
CAPN1-223ENST00000533079 TRAV26-2A0A0B4J265 109 aa8.01□□□□□ -1.13
CAPN1-223ENST00000533079 VCYO14598 125 aa8.01□□□□□ -1.13
CAPN1-223ENST00000533079 ORMDL2Q53FV1 153 aa8.01□□□□□ -1.13
CAPN1-223ENST00000533079 SUMO4Q6EEV6 95 aa8.01□□□□□ -1.13
CAPN1-223ENST00000533079 TEX43Q6ZNM6 134 aa8.01□□□□□ -1.13
CAPN1-223ENST00000533079 UBE2WQ96B02 151 aa8.01□□□□□ -1.13
CAPN1-223ENST00000533079 C1orf43Q9BWL3 253 aa8.01□□□□□ -1.13
CAPN1-223ENST00000533079 MAP1LC3CQ9BXW4 147 aa8.01□□□□□ -1.13
CAPN1-223ENST00000533079 ST20Q9HBF5 79 aa8.01□□□□□ -1.13
CAPN1-223ENST00000533079 KLK12Q9UKR0 248 aa8.01□□□□□ -1.13
CAPN1-223ENST00000533079 A0A087WWL8 130 aa8□□□□□ -1.13
CAPN1-223ENST00000533079 F5H697 171 aa8□□□□□ -1.13
CAPN1-223ENST00000533079 SYS1-DBNDD2H3BUS1 97 aa8□□□□□ -1.13
CAPN1-223ENST00000533079 TCAPO15273 167 aa8□□□□□ -1.13
CAPN1-223ENST00000533079 MGPP08493 103 aa8□□□□□ -1.13
CAPN1-223ENST00000533079 KRTDAPP60985 99 aa8□□□□□ -1.13
CAPN1-223ENST00000533079 PMCHL1Q16048 86 aa8□□□□□ -1.13
CAPN1-223ENST00000533079 DGAT2L7PQ6IED9 249 aa8□□□□□ -1.13
CAPN1-223ENST00000533079 TRBV27A0A0K0K1C4 114 aa7.99□□□□□ -1.13
CAPN1-223ENST00000533079 DNAJC30Q96LL9 226 aa7.99□□□□□ -1.13
CAPN1-223ENST00000533079 C9orf163Q8N9P6 203 aa7.98□□□□□ -1.13
CAPN1-223ENST00000533079 RPL39LQ96EH5 51 aaKnown RBP7.98□□□□□ -1.13
CAPN1-223ENST00000533079 C20orf202A1L168 122 aa7.97□□□□□ -1.13
CAPN1-223ENST00000533079 ATP5LO75964 103 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms