RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 FOXP2O15409 715 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 TAF5LO75529 589 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 IFNAR1P17181 557 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 IQCB1Q15051 598 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 UBE3CQ15386 1083 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 RNF10Q8N5U6 811 aaKnown RBP4.55□□□□□ -1.68
SOX6-217ENST00000533870 SECISBP2LQ93073 1101 aaKnown RBP4.55□□□□□ -1.68
SOX6-217ENST00000533870 LARSQ9P2J5 1176 aaKnown RBP4.55□□□□□ -1.68
SOX6-217ENST00000533870 WDR17Q8IZU2 1322 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 SH3TC1Q8TE82 1336 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 NLRP1Q9C000 1473 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 GTPBP6O43824 516 aaPredicted RBP4.55□□□□□ -1.68
SOX6-217ENST00000533870 GADD45BO75293 160 aaPredicted RBP4.55□□□□□ -1.68
SOX6-217ENST00000533870 BIRC3Q13489 604 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 KRT40Q6A162 431 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 CCDC26Q8TAB7 109 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 JAKMIP2Q96AA8 810 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 C19orf44Q9H6X5 657 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 PARP2Q9UGN5 583 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 LAD1O00515 517 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 ZNF202O95125 648 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 HNRNPH2P55795 449 aaKnown RBP4.55□□□□□ -1.68
SOX6-217ENST00000533870 CFAP221Q4G0U5 840 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 BEND3Q5T5X7 828 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 MSL1Q68DK7 614 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 WWC2Q6AWC2 1192 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 C8orf74Q6P047 294 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 USP28Q96RU2 1077 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 PALD1Q9ULE6 856 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 ABCB11O95342 1321 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 SASH1O94885 1247 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 RASSF2P50749 326 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 SETDB1Q15047 1291 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 RBM26Q5T8P6 1007 aaKnown RBP4.55□□□□□ -1.68
SOX6-217ENST00000533870 TTLL7Q6ZT98 887 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 UBE3BQ7Z3V4 1068 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 ZNF830Q96NB3 372 aaPredicted RBP4.55□□□□□ -1.68
SOX6-217ENST00000533870 LZTS2Q9BRK4 669 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 FAM129AQ9BZQ8 928 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 TRIM7Q9C029 511 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 A1CFQ9NQ94 594 aaKnown RBP4.55□□□□□ -1.68
SOX6-217ENST00000533870 SPATS2LQ9NUQ6 558 aaKnown RBP4.55□□□□□ -1.68
SOX6-217ENST00000533870 HMGB1P1B2RPK0 211 aaPredicted RBP4.55□□□□□ -1.68
SOX6-217ENST00000533870 F6X3S4 739 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 TRIM21P19474 475 aaKnown RBP4.55□□□□□ -1.68
SOX6-217ENST00000533870 NAP1L1P55209 391 aaKnown RBP4.55□□□□□ -1.68
SOX6-217ENST00000533870 ZBED6P86452 979 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 RBBP5Q15291 538 aaKnown RBP4.55□□□□□ -1.68
SOX6-217ENST00000533870 CCDC122Q5T0U0 273 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 ANKRD13DQ6ZTN6 518 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 KCTD17Q8N5Z5 321 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 DTNBP1Q96EV8 351 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 BOLA2Q9H3K6 86 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 PLCB1Q9NQ66 1216 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 KDRP35968 1356 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 BTBD11A6QL63 1104 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 KRT9P35527 623 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 KMT5BQ4FZB7 885 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 Q6ZUG5 572 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 YTHDF3Q7Z739 585 aaKnown RBP4.55□□□□□ -1.68
SOX6-217ENST00000533870 PPP1R13BQ96KQ4 1090 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 NOX5Q96PH1 765 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 SPAG5Q96R06 1193 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 CPSF2Q9P2I0 782 aaKnown RBP4.55□□□□□ -1.68
SOX6-217ENST00000533870 RAB21Q9UL25 225 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 PCDHA7Q9UN72 937 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 SALL3Q9BXA9 1300 aa4.55□□□□□ -1.68
SOX6-217ENST00000533870 ATP2A1O14983 1001 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 CD2BP2O95400 341 aaKnown RBP4.54□□□□□ -1.68
SOX6-217ENST00000533870 MTIF2P46199 727 aaKnown RBP4.54□□□□□ -1.68
SOX6-217ENST00000533870 MTHFSDQ2M296 383 aaKnown RBP4.54□□□□□ -1.68
SOX6-217ENST00000533870 SH2D4BQ5SQS7 431 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 ARL6IP4Q66PJ3 421 aaKnown RBP4.54□□□□□ -1.68
SOX6-217ENST00000533870 BICDL1Q6ZP65 573 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 CATIPQ7Z7H3 387 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 TXNDC2Q86VQ3 553 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 DIS3L2Q8IYB7 885 aaKnown RBP4.54□□□□□ -1.68
SOX6-217ENST00000533870 RASEFQ8IZ41 740 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 SYCE1Q8N0S2 351 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 ATRIPQ8WXE1 791 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 TBC1D31Q96DN5 1066 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 TRIM47Q96LD4 638 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 MAP3K19Q56UN5 1328 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 ITIH6Q6UXX5 1313 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 HNRNPCL1O60812 293 aaKnown RBP4.54□□□□□ -1.68
SOX6-217ENST00000533870 CIAO1O76071 339 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 ME3Q16798 604 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 ZNF569Q5MCW4 686 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 NSUN7Q8NE18 718 aaKnown RBP4.54□□□□□ -1.68
SOX6-217ENST00000533870 OTUD7AQ8TE49 926 aaPredicted RBP4.54□□□□□ -1.68
SOX6-217ENST00000533870 CALML4Q96GE6 196 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 TUBB6Q9BUF5 446 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.54□□□□□ -1.68
SOX6-217ENST00000533870 FAM114A2Q9NRY5 505 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 STIM2Q9P246 746 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 SART1O43290 800 aaKnown RBP4.54□□□□□ -1.68
SOX6-217ENST00000533870 MAP4K4O95819 1239 aaPredicted RBP4.54□□□□□ -1.68
SOX6-217ENST00000533870 KRT18P05783 430 aaKnown RBP4.54□□□□□ -1.68
SOX6-217ENST00000533870 POTEJP0CG39 1038 aa4.54□□□□□ -1.68
SOX6-217ENST00000533870 PFKFB1P16118 471 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms