RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 DDX4Q9NQI0 724 aaKnown RBP13.59□□□□□ -0.23
TMEM39A-211ENST00000491685 ZNF112Q9UJU3 913 aa13.59□□□□□ -0.23
TMEM39A-211ENST00000491685 PDS5AQ29RF7 1337 aaKnown RBP13.59□□□□□ -0.23
TMEM39A-211ENST00000491685 ZBTB22O15209 634 aa13.58□□□□□ -0.24
TMEM39A-211ENST00000491685 CETPP11597 493 aa13.58□□□□□ -0.24
TMEM39A-211ENST00000491685 SNAPC2Q13487 334 aa13.58□□□□□ -0.24
TMEM39A-211ENST00000491685 MOGSQ13724 837 aa13.58□□□□□ -0.24
TMEM39A-211ENST00000491685 MVPQ14764 893 aaKnown RBP13.58□□□□□ -0.24
TMEM39A-211ENST00000491685 ABCF2Q9UG63 623 aa13.58□□□□□ -0.24
TMEM39A-211ENST00000491685 COG6Q9Y2V7 657 aa13.58□□□□□ -0.24
TMEM39A-211ENST00000491685 DDTLA6NHG4 134 aaPredicted RBP13.57□□□□□ -0.24
TMEM39A-211ENST00000491685 WDHD1O75717 1129 aaPredicted RBP13.57□□□□□ -0.24
TMEM39A-211ENST00000491685 ECM2O94769 699 aaPredicted RBP13.57□□□□□ -0.24
TMEM39A-211ENST00000491685 CTGFP29279 349 aa13.57□□□□□ -0.24
TMEM39A-211ENST00000491685 BTDP43251 543 aa13.57□□□□□ -0.24
TMEM39A-211ENST00000491685 PPATQ06203 517 aa13.57□□□□□ -0.24
TMEM39A-211ENST00000491685 NOL9Q5SY16 702 aaKnown RBP13.57□□□□□ -0.24
TMEM39A-211ENST00000491685 DZIP1Q86YF9 867 aaKnown RBP13.57□□□□□ -0.24
TMEM39A-211ENST00000491685 ARMC5Q96C12 935 aa13.57□□□□□ -0.24
TMEM39A-211ENST00000491685 IDI2Q9BXS1 227 aa13.57□□□□□ -0.24
TMEM39A-211ENST00000491685 HMG20BQ9P0W2 317 aa13.57□□□□□ -0.24
TMEM39A-211ENST00000491685 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.57□□□□□ -0.24
TMEM39A-211ENST00000491685 PTCH2Q9Y6C5 1203 aa13.57□□□□□ -0.24
TMEM39A-211ENST00000491685 LOC285556D6RIA3 1793 aa13.57□□□□□ -0.24
TMEM39A-211ENST00000491685 MROH7-TTC4A0A0A0MT08 1334 aa13.57□□□□□ -0.24
TMEM39A-211ENST00000491685 ADGRA2Q96PE1 1338 aa13.57□□□□□ -0.24
TMEM39A-211ENST00000491685 PHF20L1A8MW92 1017 aa13.56□□□□□ -0.24
TMEM39A-211ENST00000491685 TLR2O60603 784 aa13.56□□□□□ -0.24
TMEM39A-211ENST00000491685 MECOMQ03112 1051 aa13.56□□□□□ -0.24
TMEM39A-211ENST00000491685 AAMPQ13685 434 aa13.56□□□□□ -0.24
TMEM39A-211ENST00000491685 TBC1D9Q6ZT07 1266 aa13.56□□□□□ -0.24
TMEM39A-211ENST00000491685 NEUROD6Q96NK8 337 aa13.56□□□□□ -0.24
TMEM39A-211ENST00000491685 C1orf115Q9H7X2 142 aa13.56□□□□□ -0.24
TMEM39A-211ENST00000491685 KCNH4Q9UQ05 1017 aa13.56□□□□□ -0.24
TMEM39A-211ENST00000491685 ENTPD3O75355 529 aa13.55□□□□□ -0.24
TMEM39A-211ENST00000491685 RLBP1P12271 317 aa13.55□□□□□ -0.24
TMEM39A-211ENST00000491685 RHBDL3P58872 404 aa13.55□□□□□ -0.24
TMEM39A-211ENST00000491685 LACTBP83111 547 aaPredicted RBP13.55□□□□□ -0.24
TMEM39A-211ENST00000491685 PICALMQ13492 652 aa13.55□□□□□ -0.24
TMEM39A-211ENST00000491685 ZGPATQ8N5A5 531 aaKnown RBP13.55□□□□□ -0.24
TMEM39A-211ENST00000491685 ZCCHC17Q9NP64 241 aaKnown RBP13.55□□□□□ -0.24
TMEM39A-211ENST00000491685 CPA4Q9UI42 421 aa13.55□□□□□ -0.24
TMEM39A-211ENST00000491685 AKAP2Q9Y2D5 859 aa13.55□□□□□ -0.24
TMEM39A-211ENST00000491685 FAM196BA6NMK8 535 aa13.54□□□□□ -0.24
TMEM39A-211ENST00000491685 PDHXO00330 501 aa13.54□□□□□ -0.24
TMEM39A-211ENST00000491685 EN2P19622 333 aaPredicted RBP13.54□□□□□ -0.24
TMEM39A-211ENST00000491685 ARID4AP29374 1257 aaPredicted RBP13.54□□□□□ -0.24
TMEM39A-211ENST00000491685 MCAMP43121 646 aa13.54□□□□□ -0.24
TMEM39A-211ENST00000491685 POLA2Q14181 598 aa13.54□□□□□ -0.24
TMEM39A-211ENST00000491685 C17orf99Q6UX52 265 aa13.54□□□□□ -0.24
TMEM39A-211ENST00000491685 ANKRD23Q86SG2 305 aa13.54□□□□□ -0.24
TMEM39A-211ENST00000491685 CCDC84Q86UT8 332 aaPredicted RBP13.54□□□□□ -0.24
TMEM39A-211ENST00000491685 RPAP2Q8IXW5 612 aaPredicted RBP13.54□□□□□ -0.24
TMEM39A-211ENST00000491685 SCYL3Q8IZE3 742 aa13.54□□□□□ -0.24
TMEM39A-211ENST00000491685 SPATA5Q8NB90 893 aa13.54□□□□□ -0.24
TMEM39A-211ENST00000491685 FAM163AQ96GL9 167 aaPredicted RBP13.54□□□□□ -0.24
TMEM39A-211ENST00000491685 ZNF333Q96JL9 665 aa13.54□□□□□ -0.24
TMEM39A-211ENST00000491685 SZT2Q5T011 3432 aa13.54□□□□□ -0.24
TMEM39A-211ENST00000491685 GPR75-ASB3A0A0A6YYF3 556 aa13.53□□□□□ -0.24
TMEM39A-211ENST00000491685 HMMRO75330 724 aa13.53□□□□□ -0.24
TMEM39A-211ENST00000491685 MYCP01106 439 aaPredicted RBP13.53□□□□□ -0.24
TMEM39A-211ENST00000491685 ATP8B2P98198 1209 aa13.53□□□□□ -0.24
TMEM39A-211ENST00000491685 GPAT2Q6NUI2 795 aa13.53□□□□□ -0.24
TMEM39A-211ENST00000491685 ERICH6Q7L0X2 663 aa13.53□□□□□ -0.24
TMEM39A-211ENST00000491685 ZSCAN29Q8IWY8 852 aaPredicted RBP13.53□□□□□ -0.24
TMEM39A-211ENST00000491685 SH3TC2Q8TF17 1288 aa13.53□□□□□ -0.24
TMEM39A-211ENST00000491685 NSUN4Q96CB9 384 aaKnown RBP13.53□□□□□ -0.24
TMEM39A-211ENST00000491685 CYP2C8P10632 490 aa13.52□□□□□ -0.25
TMEM39A-211ENST00000491685 PTPRAP18433 802 aa13.52□□□□□ -0.25
TMEM39A-211ENST00000491685 MAP3K10Q02779 954 aa13.52□□□□□ -0.25
TMEM39A-211ENST00000491685 ARHGEF6Q15052 776 aa13.52□□□□□ -0.25
TMEM39A-211ENST00000491685 SPTY2D1Q68D10 685 aaPredicted RBP13.52□□□□□ -0.25
TMEM39A-211ENST00000491685 DBNDD2Q9BQY9 259 aa13.52□□□□□ -0.25
TMEM39A-211ENST00000491685 SNRKQ9NRH2 765 aa13.52□□□□□ -0.25
TMEM39A-211ENST00000491685 ZBTB40Q9NUA8 1239 aa13.52□□□□□ -0.25
TMEM39A-211ENST00000491685 CEP290O15078 2479 aa13.51□□□□□ -0.25
TMEM39A-211ENST00000491685 COL2A1P02458 1487 aaPredicted RBP13.51□□□□□ -0.25
TMEM39A-211ENST00000491685 G3BP1Q13283 466 aaKnown RBP eCLIP13.51□□□□□ -0.25
TMEM39A-211ENST00000491685 SLC9C1Q4G0N8 1177 aa13.51□□□□□ -0.25
TMEM39A-211ENST00000491685 TNNI3KQ59H18 835 aa13.51□□□□□ -0.25
TMEM39A-211ENST00000491685 GORABQ5T7V8 394 aa13.51□□□□□ -0.25
TMEM39A-211ENST00000491685 C20orf194Q5TEA3 1177 aa13.51□□□□□ -0.25
TMEM39A-211ENST00000491685 SLF2Q8IX21 1173 aa13.51□□□□□ -0.25
TMEM39A-211ENST00000491685 SSH3Q8TE77 659 aa13.51□□□□□ -0.25
TMEM39A-211ENST00000491685 TRIM47Q96LD4 638 aa13.51□□□□□ -0.25
TMEM39A-211ENST00000491685 TLR7Q9NYK1 1049 aaKnown RBP13.51□□□□□ -0.25
TMEM39A-211ENST00000491685 COLQQ9Y215 455 aaPredicted RBP13.51□□□□□ -0.25
TMEM39A-211ENST00000491685 ZHX2Q9Y6X8 837 aa13.51□□□□□ -0.25
TMEM39A-211ENST00000491685 FPGT-TNNI3KV9GXZ4 949 aa13.51□□□□□ -0.25
TMEM39A-211ENST00000491685 MYH1P12882 1939 aa13.51□□□□□ -0.25
TMEM39A-211ENST00000491685 TRIOBPQ9H2D6 2365 aa13.5□□□□□ -0.25
TMEM39A-211ENST00000491685 A0A0G2JLL6 359 aaPredicted RBP13.5□□□□□ -0.25
TMEM39A-211ENST00000491685 RRP1BQ14684 758 aaKnown RBP13.5□□□□□ -0.25
TMEM39A-211ENST00000491685 HSP90AB4PQ58FF6 505 aa13.5□□□□□ -0.25
TMEM39A-211ENST00000491685 ERICH6BQ5W0A0 696 aa13.5□□□□□ -0.25
TMEM39A-211ENST00000491685 PRRT2Q7Z6L0 340 aaPredicted RBP13.5□□□□□ -0.25
TMEM39A-211ENST00000491685 ADGRA1Q86SQ6 560 aa13.5□□□□□ -0.25
TMEM39A-211ENST00000491685 SH3RF3Q8TEJ3 882 aaPredicted RBP13.5□□□□□ -0.25
TMEM39A-211ENST00000491685 RAI14Q9P0K7 980 aa13.5□□□□□ -0.25
TMEM39A-211ENST00000491685 AFG3L2Q9Y4W6 797 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms