RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 POLA2Q14181 598 aa19.19■□□□□ 0.66
SEC13-210ENST00000428626 ZKSCAN2Q63HK3 967 aa19.19■□□□□ 0.66
SEC13-210ENST00000428626 ADGRA2Q96PE1 1338 aa19.19■□□□□ 0.66
SEC13-210ENST00000428626 RBBP6Q7Z6E9 1792 aaKnown RBP19.19■□□□□ 0.66
SEC13-210ENST00000428626 GPR75-ASB3A0A0A6YYF3 556 aa19.18■□□□□ 0.66
SEC13-210ENST00000428626 SLC34A2O95436 690 aa19.18■□□□□ 0.66
SEC13-210ENST00000428626 RLBP1P12271 317 aa19.18■□□□□ 0.66
SEC13-210ENST00000428626 ARID4AP29374 1257 aaPredicted RBP19.18■□□□□ 0.66
SEC13-210ENST00000428626 MCAMP43121 646 aa19.18■□□□□ 0.66
SEC13-210ENST00000428626 MAP3K10Q02779 954 aa19.18■□□□□ 0.66
SEC13-210ENST00000428626 SPATA5Q8NB90 893 aa19.18■□□□□ 0.66
SEC13-210ENST00000428626 C1orf115Q9H7X2 142 aa19.18■□□□□ 0.66
SEC13-210ENST00000428626 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.18■□□□□ 0.66
SEC13-210ENST00000428626 ECM2O94769 699 aaPredicted RBP19.17■□□□□ 0.66
SEC13-210ENST00000428626 LACTBP83111 547 aaPredicted RBP19.17■□□□□ 0.66
SEC13-210ENST00000428626 G3BP1Q13283 466 aaKnown RBP eCLIP19.17■□□□□ 0.66
SEC13-210ENST00000428626 PICALMQ13492 652 aa19.17■□□□□ 0.66
SEC13-210ENST00000428626 SPTY2D1Q68D10 685 aaPredicted RBP19.17■□□□□ 0.66
SEC13-210ENST00000428626 GPAT2Q6NUI2 795 aa19.17■□□□□ 0.66
SEC13-210ENST00000428626 C17orf99Q6UX52 265 aa19.17■□□□□ 0.66
SEC13-210ENST00000428626 ERICH6Q7L0X2 663 aa19.17■□□□□ 0.66
SEC13-210ENST00000428626 ANKRD23Q86SG2 305 aa19.17■□□□□ 0.66
SEC13-210ENST00000428626 NSUN4Q96CB9 384 aaKnown RBP19.17■□□□□ 0.66
SEC13-210ENST00000428626 CPA4Q9UI42 421 aa19.17■□□□□ 0.66
SEC13-210ENST00000428626 PHIPQ8WWQ0 1821 aa19.16■□□□□ 0.66
SEC13-210ENST00000428626 PDHXO00330 501 aa19.16■□□□□ 0.66
SEC13-210ENST00000428626 SSH3Q8TE77 659 aa19.16■□□□□ 0.66
SEC13-210ENST00000428626 ZNF333Q96JL9 665 aa19.16■□□□□ 0.66
SEC13-210ENST00000428626 PTPRFP10586 1907 aa19.15■□□□□ 0.66
SEC13-210ENST00000428626 PTPRAP18433 802 aa19.15■□□□□ 0.66
SEC13-210ENST00000428626 EN2P19622 333 aaPredicted RBP19.15■□□□□ 0.66
SEC13-210ENST00000428626 ATP8B2P98198 1209 aa19.15■□□□□ 0.66
SEC13-210ENST00000428626 PRPF38BQ5VTL8 546 aaKnown RBP19.15■□□□□ 0.66
SEC13-210ENST00000428626 CCDC84Q86UT8 332 aaPredicted RBP19.15■□□□□ 0.66
SEC13-210ENST00000428626 ZSCAN29Q8IWY8 852 aaPredicted RBP19.15■□□□□ 0.66
SEC13-210ENST00000428626 SCYL3Q8IZE3 742 aa19.15■□□□□ 0.66
SEC13-210ENST00000428626 DOCK1Q14185 1865 aa19.14■□□□□ 0.65
SEC13-210ENST00000428626 MYO5AQ9Y4I1 1855 aaKnown RBP19.14■□□□□ 0.65
SEC13-210ENST00000428626 FAM196BA6NMK8 535 aa19.14■□□□□ 0.65
SEC13-210ENST00000428626 TNNI3KQ59H18 835 aa19.14■□□□□ 0.65
SEC13-210ENST00000428626 GORABQ5T7V8 394 aa19.14■□□□□ 0.65
SEC13-210ENST00000428626 SLF2Q8IX21 1173 aa19.14■□□□□ 0.65
SEC13-210ENST00000428626 DBNDD2Q9BQY9 259 aa19.14■□□□□ 0.65
SEC13-210ENST00000428626 SNRKQ9NRH2 765 aa19.14■□□□□ 0.65
SEC13-210ENST00000428626 ZHX2Q9Y6X8 837 aa19.14■□□□□ 0.65
SEC13-210ENST00000428626 FPGT-TNNI3KV9GXZ4 949 aa19.14■□□□□ 0.65
SEC13-210ENST00000428626 CXCL11O14625 94 aa19.13■□□□□ 0.65
SEC13-210ENST00000428626 ZBTB7BO15156 539 aaPredicted RBP19.13■□□□□ 0.65
SEC13-210ENST00000428626 CYP2C8P10632 490 aa19.13■□□□□ 0.65
SEC13-210ENST00000428626 SH3TC2Q8TF17 1288 aa19.13■□□□□ 0.65
SEC13-210ENST00000428626 TRIM47Q96LD4 638 aa19.13■□□□□ 0.65
SEC13-210ENST00000428626 RAI14Q9P0K7 980 aa19.13■□□□□ 0.65
SEC13-210ENST00000428626 AFG3L2Q9Y4W6 797 aa19.13■□□□□ 0.65
SEC13-210ENST00000428626 A0A0G2JLL6 359 aaPredicted RBP19.12■□□□□ 0.65
SEC13-210ENST00000428626 RRP1BQ14684 758 aaKnown RBP19.12■□□□□ 0.65
SEC13-210ENST00000428626 SLC9C1Q4G0N8 1177 aa19.12■□□□□ 0.65
SEC13-210ENST00000428626 PRRT2Q7Z6L0 340 aaPredicted RBP19.12■□□□□ 0.65
SEC13-210ENST00000428626 GPR108Q9NPR9 543 aa19.12■□□□□ 0.65
SEC13-210ENST00000428626 NPM3O75607 178 aaKnown RBP19.11■□□□□ 0.65
SEC13-210ENST00000428626 SURF6O75683 361 aaKnown RBP19.11■□□□□ 0.65
SEC13-210ENST00000428626 MYCP01106 439 aaPredicted RBP19.11■□□□□ 0.65
SEC13-210ENST00000428626 BCRP11274 1271 aa19.11■□□□□ 0.65
SEC13-210ENST00000428626 ARHGEF6Q15052 776 aa19.11■□□□□ 0.65
SEC13-210ENST00000428626 DIEXFQ68CQ4 756 aaKnown RBP19.11■□□□□ 0.65
SEC13-210ENST00000428626 PICK1Q9NRD5 415 aa19.11■□□□□ 0.65
SEC13-210ENST00000428626 TLR7Q9NYK1 1049 aaKnown RBP19.11■□□□□ 0.65
SEC13-210ENST00000428626 SIPA1L1O43166 1804 aa19.11■□□□□ 0.65
SEC13-210ENST00000428626 CTNND1O60716 968 aaKnown RBP19.1■□□□□ 0.65
SEC13-210ENST00000428626 UQCRFS1P1P0C7P4 283 aa19.1■□□□□ 0.65
SEC13-210ENST00000428626 PSMC4P43686 418 aa19.1■□□□□ 0.65
SEC13-210ENST00000428626 ADGRA1Q86SQ6 560 aa19.1■□□□□ 0.65
SEC13-210ENST00000428626 ITPRIPQ8IWB1 547 aa19.1■□□□□ 0.65
SEC13-210ENST00000428626 SH3RF3Q8TEJ3 882 aaPredicted RBP19.1■□□□□ 0.65
SEC13-210ENST00000428626 OSBPL5Q9H0X9 879 aaPredicted RBP19.1■□□□□ 0.65
SEC13-210ENST00000428626 NOP58Q9Y2X3 529 aaKnown RBP19.1■□□□□ 0.65
SEC13-210ENST00000428626 TBC1D12O60347 775 aa19.09■□□□□ 0.65
SEC13-210ENST00000428626 CYP2E1P05181 493 aaPredicted RBP19.09■□□□□ 0.65
SEC13-210ENST00000428626 LDHCP07864 332 aa19.09■□□□□ 0.65
SEC13-210ENST00000428626 OSBPP22059 807 aa19.09■□□□□ 0.65
SEC13-210ENST00000428626 GSTO1P78417 241 aa19.09■□□□□ 0.65
SEC13-210ENST00000428626 KIF22Q14807 665 aa19.09■□□□□ 0.65
SEC13-210ENST00000428626 FTSJ3Q8IY81 847 aaKnown RBP19.09■□□□□ 0.65
SEC13-210ENST00000428626 LRP2BPQ9P2M1 347 aa19.09■□□□□ 0.65
SEC13-210ENST00000428626 DBNLQ9UJU6 430 aaKnown RBP19.09■□□□□ 0.65
SEC13-210ENST00000428626 CDK5RAP2Q96SN8 1893 aa19.09■□□□□ 0.65
SEC13-210ENST00000428626 COL2A1P02458 1487 aaPredicted RBP19.09■□□□□ 0.65
SEC13-210ENST00000428626 MAST2Q6P0Q8 1798 aa19.09■□□□□ 0.65
SEC13-210ENST00000428626 TRIM75PA6NK02 468 aa19.08■□□□□ 0.64
SEC13-210ENST00000428626 OS9Q13438 667 aaPredicted RBP19.08■□□□□ 0.64
SEC13-210ENST00000428626 TTC39AQ5SRH9 613 aa19.08■□□□□ 0.64
SEC13-210ENST00000428626 GADL1Q6ZQY3 521 aa19.08■□□□□ 0.64
SEC13-210ENST00000428626 EAF2Q96CJ1 260 aaPredicted RBP19.08■□□□□ 0.64
SEC13-210ENST00000428626 PARK7Q99497 189 aaKnown RBP19.08■□□□□ 0.64
SEC13-210ENST00000428626 PIH1D3Q9NQM4 214 aaKnown RBP19.08■□□□□ 0.64
SEC13-210ENST00000428626 SRRDQ9UH36 339 aa19.08■□□□□ 0.64
SEC13-210ENST00000428626 MGAMO43451 1857 aa19.07■□□□□ 0.64
SEC13-210ENST00000428626 ATAD5Q96QE3 1844 aa19.07■□□□□ 0.64
SEC13-210ENST00000428626 GNRH1P01148 92 aa19.07■□□□□ 0.64
SEC13-210ENST00000428626 ZAP70P43403 619 aa19.07■□□□□ 0.64
SEC13-210ENST00000428626 MTFR1Q15390 333 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms