RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 ENTPD3O75355 529 aa12.45□□□□□ -0.42
GACAT3-201ENST00000426539 WDHD1O75717 1129 aaPredicted RBP12.45□□□□□ -0.42
GACAT3-201ENST00000426539 LACTBP83111 547 aaPredicted RBP12.45□□□□□ -0.42
GACAT3-201ENST00000426539 PI16Q6UXB8 463 aa12.45□□□□□ -0.42
GACAT3-201ENST00000426539 ATF7IPQ6VMQ6 1270 aa12.45□□□□□ -0.42
GACAT3-201ENST00000426539 ANKRD23Q86SG2 305 aa12.45□□□□□ -0.42
GACAT3-201ENST00000426539 ZGPATQ8N5A5 531 aaKnown RBP12.45□□□□□ -0.42
GACAT3-201ENST00000426539 ABCF2Q9UG63 623 aa12.45□□□□□ -0.42
GACAT3-201ENST00000426539 MYH13Q9UKX3 1938 aa12.45□□□□□ -0.42
GACAT3-201ENST00000426539 PDHXO00330 501 aa12.44□□□□□ -0.42
GACAT3-201ENST00000426539 BTDP43251 543 aa12.44□□□□□ -0.42
GACAT3-201ENST00000426539 RHBDL3P58872 404 aa12.44□□□□□ -0.42
GACAT3-201ENST00000426539 MAP3K10Q02779 954 aa12.44□□□□□ -0.42
GACAT3-201ENST00000426539 MVPQ14764 893 aaKnown RBP12.44□□□□□ -0.42
GACAT3-201ENST00000426539 GPAT2Q6NUI2 795 aa12.44□□□□□ -0.42
GACAT3-201ENST00000426539 DZIP1Q86YF9 867 aaKnown RBP12.44□□□□□ -0.42
GACAT3-201ENST00000426539 FRAT1Q92837 279 aaPredicted RBP12.44□□□□□ -0.42
GACAT3-201ENST00000426539 CLUAP1Q96AJ1 413 aa12.44□□□□□ -0.42
GACAT3-201ENST00000426539 HMG20BQ9P0W2 317 aa12.44□□□□□ -0.42
GACAT3-201ENST00000426539 CPA4Q9UI42 421 aa12.44□□□□□ -0.42
GACAT3-201ENST00000426539 AKAP2Q9Y2D5 859 aa12.44□□□□□ -0.42
GACAT3-201ENST00000426539 ZSWIM8A7E2V4 1837 aa12.44□□□□□ -0.42
GACAT3-201ENST00000426539 MROH7-TTC4A0A0A0MT08 1334 aa12.43□□□□□ -0.42
GACAT3-201ENST00000426539 GPR75-ASB3A0A0A6YYF3 556 aa12.43□□□□□ -0.42
GACAT3-201ENST00000426539 IPO8O15397 1037 aaKnown RBP12.43□□□□□ -0.42
GACAT3-201ENST00000426539 ECM2O94769 699 aaPredicted RBP12.43□□□□□ -0.42
GACAT3-201ENST00000426539 GNAI2P04899 355 aa12.43□□□□□ -0.42
GACAT3-201ENST00000426539 MECOMQ03112 1051 aa12.43□□□□□ -0.42
GACAT3-201ENST00000426539 ARHGEF6Q15052 776 aa12.43□□□□□ -0.42
GACAT3-201ENST00000426539 TBC1D9Q6ZT07 1266 aa12.43□□□□□ -0.42
GACAT3-201ENST00000426539 SCYL3Q8IZE3 742 aa12.43□□□□□ -0.42
GACAT3-201ENST00000426539 CXCL11O14625 94 aa12.42□□□□□ -0.42
GACAT3-201ENST00000426539 PTPRAP18433 802 aa12.42□□□□□ -0.42
GACAT3-201ENST00000426539 ARID4AP29374 1257 aaPredicted RBP12.42□□□□□ -0.42
GACAT3-201ENST00000426539 VASPP50552 380 aaPredicted RBP12.42□□□□□ -0.42
GACAT3-201ENST00000426539 PICALMQ13492 652 aa12.42□□□□□ -0.42
GACAT3-201ENST00000426539 SLC9C1Q4G0N8 1177 aa12.42□□□□□ -0.42
GACAT3-201ENST00000426539 SPTY2D1Q68D10 685 aaPredicted RBP12.42□□□□□ -0.42
GACAT3-201ENST00000426539 ERICH6Q7L0X2 663 aa12.42□□□□□ -0.42
GACAT3-201ENST00000426539 TMEM57Q8N5G2 664 aa12.42□□□□□ -0.42
GACAT3-201ENST00000426539 SPATA5Q8NB90 893 aa12.42□□□□□ -0.42
GACAT3-201ENST00000426539 SH3TC2Q8TF17 1288 aa12.42□□□□□ -0.42
GACAT3-201ENST00000426539 TRIM47Q96LD4 638 aa12.42□□□□□ -0.42
GACAT3-201ENST00000426539 NEUROD6Q96NK8 337 aa12.42□□□□□ -0.42
GACAT3-201ENST00000426539 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.42□□□□□ -0.42
GACAT3-201ENST00000426539 A0A0G2JLL6 359 aaPredicted RBP12.41□□□□□ -0.42
GACAT3-201ENST00000426539 MYCP01106 439 aaPredicted RBP12.41□□□□□ -0.42
GACAT3-201ENST00000426539 CYP2C8P10632 490 aa12.41□□□□□ -0.42
GACAT3-201ENST00000426539 MCAMP43121 646 aa12.41□□□□□ -0.42
GACAT3-201ENST00000426539 PSMC4P43686 418 aa12.41□□□□□ -0.42
GACAT3-201ENST00000426539 KIF22Q14807 665 aa12.41□□□□□ -0.42
GACAT3-201ENST00000426539 PRRT2Q7Z6L0 340 aaPredicted RBP12.41□□□□□ -0.42
GACAT3-201ENST00000426539 ZSCAN29Q8IWY8 852 aaPredicted RBP12.41□□□□□ -0.42
GACAT3-201ENST00000426539 SLF2Q8IX21 1173 aa12.41□□□□□ -0.42
GACAT3-201ENST00000426539 NSUN4Q96CB9 384 aaKnown RBP12.41□□□□□ -0.42
GACAT3-201ENST00000426539 AFG3L2Q9Y4W6 797 aa12.41□□□□□ -0.42
GACAT3-201ENST00000426539 ZHX2Q9Y6X8 837 aa12.41□□□□□ -0.42
GACAT3-201ENST00000426539 RBBP6Q7Z6E9 1792 aaKnown RBP12.41□□□□□ -0.42
GACAT3-201ENST00000426539 KIAA0100Q14667 2235 aaKnown RBP12.4□□□□□ -0.42
GACAT3-201ENST00000426539 FAM196BA6NMK8 535 aa12.4□□□□□ -0.42
GACAT3-201ENST00000426539 GNRH1P01148 92 aa12.4□□□□□ -0.42
GACAT3-201ENST00000426539 BCRP11274 1271 aa12.4□□□□□ -0.42
GACAT3-201ENST00000426539 OSBPP22059 807 aa12.4□□□□□ -0.42
GACAT3-201ENST00000426539 G3BP1Q13283 466 aaKnown RBP eCLIP12.4□□□□□ -0.42
GACAT3-201ENST00000426539 NBPF11Q86T75 865 aa12.4□□□□□ -0.42
GACAT3-201ENST00000426539 CCDC84Q86UT8 332 aaPredicted RBP12.4□□□□□ -0.42
GACAT3-201ENST00000426539 TMEM106CQ9BVX2 250 aa12.4□□□□□ -0.42
GACAT3-201ENST00000426539 SRRDQ9UH36 339 aa12.4□□□□□ -0.42
GACAT3-201ENST00000426539 MYH2Q9UKX2 1941 aa12.4□□□□□ -0.42
GACAT3-201ENST00000426539 TBC1D12O60347 775 aa12.39□□□□□ -0.43
GACAT3-201ENST00000426539 CTNND1O60716 968 aaKnown RBP12.39□□□□□ -0.43
GACAT3-201ENST00000426539 PRMT2P55345 433 aa12.39□□□□□ -0.43
GACAT3-201ENST00000426539 RRP1BQ14684 758 aaKnown RBP12.39□□□□□ -0.43
GACAT3-201ENST00000426539 ZKSCAN2Q63HK3 967 aa12.39□□□□□ -0.43
GACAT3-201ENST00000426539 PARK7Q99497 189 aaKnown RBP12.39□□□□□ -0.43
GACAT3-201ENST00000426539 PICK1Q9NRD5 415 aa12.39□□□□□ -0.43
GACAT3-201ENST00000426539 MKI67P46013 3256 aaKnown RBP12.39□□□□□ -0.43
GACAT3-201ENST00000426539 CENPFP49454 3210 aa12.39□□□□□ -0.43
GACAT3-201ENST00000426539 RLBP1P12271 317 aa12.38□□□□□ -0.43
GACAT3-201ENST00000426539 ATP8B2P98198 1209 aa12.38□□□□□ -0.43
GACAT3-201ENST00000426539 MTFR1Q15390 333 aa12.38□□□□□ -0.43
GACAT3-201ENST00000426539 SLC4A8Q2Y0W8 1093 aa12.38□□□□□ -0.43
GACAT3-201ENST00000426539 TNNI3KQ59H18 835 aa12.38□□□□□ -0.43
GACAT3-201ENST00000426539 GORABQ5T7V8 394 aa12.38□□□□□ -0.43
GACAT3-201ENST00000426539 SSH3Q8TE77 659 aa12.38□□□□□ -0.43
GACAT3-201ENST00000426539 DBNDD2Q9BQY9 259 aa12.38□□□□□ -0.43
GACAT3-201ENST00000426539 C1orf115Q9H7X2 142 aa12.38□□□□□ -0.43
GACAT3-201ENST00000426539 RAI14Q9P0K7 980 aa12.38□□□□□ -0.43
GACAT3-201ENST00000426539 FPGT-TNNI3KV9GXZ4 949 aa12.38□□□□□ -0.43
GACAT3-201ENST00000426539 DOCK2Q92608 1830 aa12.38□□□□□ -0.43
GACAT3-201ENST00000426539 BRCA2P51587 3418 aa12.37□□□□□ -0.43
GACAT3-201ENST00000426539 TRIM75PA6NK02 468 aa12.37□□□□□ -0.43
GACAT3-201ENST00000426539 FMNL1O95466 1100 aaPredicted RBP12.37□□□□□ -0.43
GACAT3-201ENST00000426539 LDHCP07864 332 aa12.37□□□□□ -0.43
GACAT3-201ENST00000426539 UQCRFS1P1P0C7P4 283 aa12.37□□□□□ -0.43
GACAT3-201ENST00000426539 GSTO1P78417 241 aa12.37□□□□□ -0.43
GACAT3-201ENST00000426539 PRKCZQ05513 592 aa12.37□□□□□ -0.43
GACAT3-201ENST00000426539 GADL1Q6ZQY3 521 aa12.37□□□□□ -0.43
GACAT3-201ENST00000426539 FASTKD5Q7L8L6 764 aaKnown RBP12.37□□□□□ -0.43
GACAT3-201ENST00000426539 SH3RF3Q8TEJ3 882 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms