RNA–Protein interactions for RNA: ENST00000638154.2

TCF4-290, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 7,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-290ENST00000638154 IRX6P78412 446 aaPredicted RBP7.36□□□□□ -1.23
TCF4-290ENST00000638154 BRD2P25440 801 aaKnown RBP7.36□□□□□ -1.23
TCF4-290ENST00000638154 LAS1LQ9Y4W2 734 aaKnown RBP7.36□□□□□ -1.23
TCF4-290ENST00000638154 FKBP8Q14318 412 aa7.34□□□□□ -1.23
TCF4-290ENST00000638154 CHMP4AQ9BY43 222 aa7.32□□□□□ -1.24
TCF4-290ENST00000638154 PTMAP06454 111 aaKnown RBP7.3□□□□□ -1.24
TCF4-290ENST00000638154 WWC1Q8IX03 1113 aa7.29□□□□□ -1.24
TCF4-290ENST00000638154 OS9Q13438 667 aaPredicted RBP7.29□□□□□ -1.24
TCF4-290ENST00000638154 TAOK2Q9UL54 1235 aa7.29□□□□□ -1.24
TCF4-290ENST00000638154 ZMYND15Q9H091 742 aa7.26□□□□□ -1.25
TCF4-290ENST00000638154 RBM10P98175 930 aaKnown RBP7.26□□□□□ -1.25
TCF4-290ENST00000638154 MEX3CQ5U5Q3 659 aaKnown RBP7.26□□□□□ -1.25
TCF4-290ENST00000638154 BBXQ8WY36 941 aaPredicted RBP7.26□□□□□ -1.25
TCF4-290ENST00000638154 MAPK8IP2Q13387 824 aaPredicted RBP7.26□□□□□ -1.25
TCF4-290ENST00000638154 PNNQ9H307 717 aaKnown RBP7.26□□□□□ -1.25
TCF4-290ENST00000638154 ITGAEP38570 1179 aa7.26□□□□□ -1.25
TCF4-290ENST00000638154 NOP58Q9Y2X3 529 aaKnown RBP7.25□□□□□ -1.25
TCF4-290ENST00000638154 PSMD1Q99460 953 aa7.22□□□□□ -1.25
TCF4-290ENST00000638154 PPM1GO15355 546 aaPredicted RBP7.21□□□□□ -1.26
TCF4-290ENST00000638154 ATP1B4Q9UN42 357 aaPredicted RBP7.21□□□□□ -1.26
TCF4-290ENST00000638154 NAP1L2Q9ULW6 460 aaPredicted RBP7.2□□□□□ -1.26
TCF4-290ENST00000638154 AEBP2Q6ZN18 517 aaPredicted RBP7.19□□□□□ -1.26
TCF4-290ENST00000638154 FGD1P98174 961 aa7.19□□□□□ -1.26
TCF4-290ENST00000638154 AEBP1Q8IUX7 1158 aa7.19□□□□□ -1.26
TCF4-290ENST00000638154 STK11IPQ8N1F8 1099 aa7.19□□□□□ -1.26
TCF4-290ENST00000638154 PLCD4Q9BRC7 762 aa7.17□□□□□ -1.26
TCF4-290ENST00000638154 PLCD3Q8N3E9 789 aa7.17□□□□□ -1.26
TCF4-290ENST00000638154 ZNF771Q7L3S4 317 aaPredicted RBP7.16□□□□□ -1.26
TCF4-290ENST00000638154 RBM19Q9Y4C8 960 aaKnown RBP7.16□□□□□ -1.26
TCF4-290ENST00000638154 CC2D1BQ5T0F9 858 aaKnown RBP7.16□□□□□ -1.26
TCF4-290ENST00000638154 GOLGA6L22H0YM25 854 aa7.16□□□□□ -1.26
TCF4-290ENST00000638154 CHMP4BQ9H444 224 aaKnown RBP7.15□□□□□ -1.26
TCF4-290ENST00000638154 MSNP26038 577 aaKnown RBP7.15□□□□□ -1.27
TCF4-290ENST00000638154 IRX3P78415 501 aaPredicted RBP7.15□□□□□ -1.27
TCF4-290ENST00000638154 ZBTB7CA1YPR0 619 aa7.14□□□□□ -1.27
TCF4-290ENST00000638154 NEFHP12036 1026 aa7.14□□□□□ -1.27
TCF4-290ENST00000638154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.13□□□□□ -1.27
TCF4-290ENST00000638154 L1TD1Q5T7N2 865 aaKnown RBP7.13□□□□□ -1.27
TCF4-290ENST00000638154 E9PSI1 815 aa7.13□□□□□ -1.27
TCF4-290ENST00000638154 DDRGK1Q96HY6 314 aa7.12□□□□□ -1.27
TCF4-290ENST00000638154 PRDM10Q9NQV6 1147 aa7.12□□□□□ -1.27
TCF4-290ENST00000638154 TSHZ2Q9NRE2 1034 aa7.12□□□□□ -1.27
TCF4-290ENST00000638154 FBXO3Q9UK99 471 aa7.12□□□□□ -1.27
TCF4-290ENST00000638154 FAM193AP78312 1265 aa7.11□□□□□ -1.27
TCF4-290ENST00000638154 UPF2Q9HAU5 1272 aaKnown RBP7.11□□□□□ -1.27
TCF4-290ENST00000638154 SETQ01105 290 aaPredicted RBP7.1□□□□□ -1.27
TCF4-290ENST00000638154 GOLGA6L6A8MZA4 724 aa7.1□□□□□ -1.27
TCF4-290ENST00000638154 ANP32CO43423 234 aa7.1□□□□□ -1.27
TCF4-290ENST00000638154 SUPT16HQ9Y5B9 1047 aaKnown RBP7.1□□□□□ -1.27
TCF4-290ENST00000638154 IL27Q8NEV9 243 aa7.1□□□□□ -1.27
TCF4-290ENST00000638154 RRP9O43818 475 aaKnown RBP7.09□□□□□ -1.27
TCF4-290ENST00000638154 CNPY4Q8N129 248 aa7.09□□□□□ -1.27
TCF4-290ENST00000638154 BCCIPQ9P287 314 aaKnown RBP eCLIP7.09□□□□□ -1.28
TCF4-290ENST00000638154 CLSTN1O94985 981 aa7.08□□□□□ -1.28
TCF4-290ENST00000638154 TMX4Q9H1E5 349 aaPredicted RBP7.08□□□□□ -1.28
TCF4-290ENST00000638154 CHAF1AQ13111 956 aaPredicted RBP7.08□□□□□ -1.28
TCF4-290ENST00000638154 GOLGA6L1Q8N7Z2 621 aa7.08□□□□□ -1.28
TCF4-290ENST00000638154 FAM9BQ8IZU0 186 aa7.08□□□□□ -1.28
TCF4-290ENST00000638154 SHROOM4Q9ULL8 1493 aa7.07□□□□□ -1.28
TCF4-290ENST00000638154 TAF3Q5VWG9 929 aa7.07□□□□□ -1.28
TCF4-290ENST00000638154 KCNA4P22459 653 aa7.07□□□□□ -1.28
TCF4-290ENST00000638154 GOLGA6L3A6NEY3 463 aa7.06□□□□□ -1.28
TCF4-290ENST00000638154 FAM13BQ9NYF5 915 aa7.06□□□□□ -1.28
TCF4-290ENST00000638154 FTSJ3Q8IY81 847 aaKnown RBP7.05□□□□□ -1.28
TCF4-290ENST00000638154 ZNF592Q92610 1267 aa7.05□□□□□ -1.28
TCF4-290ENST00000638154 RBM25P49756 843 aaKnown RBP7.04□□□□□ -1.28
TCF4-290ENST00000638154 TNNT1P13805 278 aa7.03□□□□□ -1.28
TCF4-290ENST00000638154 SSR1P43307 286 aaKnown RBP7.03□□□□□ -1.28
TCF4-290ENST00000638154 LMOD2Q6P5Q4 547 aa7.03□□□□□ -1.28
TCF4-290ENST00000638154 CLGNO14967 610 aa7.03□□□□□ -1.28
TCF4-290ENST00000638154 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.02□□□□□ -1.29
TCF4-290ENST00000638154 FAM50AQ14320 339 aaKnown RBP7.01□□□□□ -1.29
TCF4-290ENST00000638154 MAP7D2Q96T17 732 aa7.01□□□□□ -1.29
TCF4-290ENST00000638154 PPP1R1BQ9UD71 204 aaPredicted RBP7.01□□□□□ -1.29
TCF4-290ENST00000638154 AXDND1Q5T1B0 1012 aaPredicted RBP7□□□□□ -1.29
TCF4-290ENST00000638154 GPATCH11Q8N954 259 aa7□□□□□ -1.29
TCF4-290ENST00000638154 AAMPQ13685 434 aa7□□□□□ -1.29
TCF4-290ENST00000638154 BECN1Q14457 450 aa7□□□□□ -1.29
TCF4-290ENST00000638154 CCDC66A2RUB6 948 aa6.99□□□□□ -1.29
TCF4-290ENST00000638154 NOM1Q5C9Z4 860 aaKnown RBP6.99□□□□□ -1.29
TCF4-290ENST00000638154 IPO4Q8TEX9 1081 aaKnown RBP6.98□□□□□ -1.29
TCF4-290ENST00000638154 ZHX1Q9UKY1 873 aaPredicted RBP6.98□□□□□ -1.29
TCF4-290ENST00000638154 ARID4AP29374 1257 aaPredicted RBP6.98□□□□□ -1.29
TCF4-290ENST00000638154 RGS3P49796 1198 aa6.97□□□□□ -1.29
TCF4-290ENST00000638154 VGLL3A8MV65 326 aa6.97□□□□□ -1.29
TCF4-290ENST00000638154 ZBTB12Q9Y330 459 aaPredicted RBP6.96□□□□□ -1.29
TCF4-290ENST00000638154 HDAC5Q9UQL6 1122 aa6.96□□□□□ -1.3
TCF4-290ENST00000638154 GSE1Q14687 1217 aa6.95□□□□□ -1.3
TCF4-290ENST00000638154 PAIP2Q9BPZ3 127 aaKnown RBP6.95□□□□□ -1.3
TCF4-290ENST00000638154 MTERF4Q7Z6M4 381 aaKnown RBP6.95□□□□□ -1.3
TCF4-290ENST00000638154 NAP1L1P55209 391 aaKnown RBP6.94□□□□□ -1.3
TCF4-290ENST00000638154 TPM2P07951 284 aa6.94□□□□□ -1.3
TCF4-290ENST00000638154 ZFP91Q96JP5 570 aaPredicted RBP6.94□□□□□ -1.3
TCF4-290ENST00000638154 MIER1Q8N108 512 aa6.94□□□□□ -1.3
TCF4-290ENST00000638154 LMOD3Q0VAK6 560 aa6.93□□□□□ -1.3
TCF4-290ENST00000638154 RSPH4AQ5TD94 716 aa6.93□□□□□ -1.3
TCF4-290ENST00000638154 MPHOSPH10O00566 681 aaKnown RBP6.93□□□□□ -1.3
TCF4-290ENST00000638154 MRVI1Q9Y6F6 885 aa6.93□□□□□ -1.3
TCF4-290ENST00000638154 P3H3Q8IVL6 736 aa6.92□□□□□ -1.3
TCF4-290ENST00000638154 UBTFP17480 764 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms