RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 ATXN8OSP0DMR3 200 aa8.41□□□□□ -1.06
CNGA1-202ENST00000402813 CCDC180Q9P1Z9 1646 aa8.41□□□□□ -1.06
CNGA1-202ENST00000402813 BCL11BQ9C0K0 894 aaPredicted RBP8.4□□□□□ -1.06
CNGA1-202ENST00000402813 FGD1P98174 961 aa8.4□□□□□ -1.06
CNGA1-202ENST00000402813 POLR3GLQ9BT43 218 aa8.4□□□□□ -1.06
CNGA1-202ENST00000402813 KCTD17Q8N5Z5 321 aa8.39□□□□□ -1.07
CNGA1-202ENST00000402813 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.39□□□□□ -1.07
CNGA1-202ENST00000402813 RAD21O60216 631 aa8.37□□□□□ -1.07
CNGA1-202ENST00000402813 FOXD1Q16676 465 aa8.36□□□□□ -1.07
CNGA1-202ENST00000402813 IFNLR1Q8IU57 520 aaPredicted RBP8.35□□□□□ -1.07
CNGA1-202ENST00000402813 ZNF326Q5BKZ1 582 aaKnown RBP8.34□□□□□ -1.07
CNGA1-202ENST00000402813 TICAM2Q86XR7 235 aa8.34□□□□□ -1.07
CNGA1-202ENST00000402813 MTMR7Q9Y216 660 aa8.32□□□□□ -1.08
CNGA1-202ENST00000402813 VASPP50552 380 aaPredicted RBP8.32□□□□□ -1.08
CNGA1-202ENST00000402813 ZNF692Q9BU19 519 aaPredicted RBP8.31□□□□□ -1.08
CNGA1-202ENST00000402813 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.29□□□□□ -1.08
CNGA1-202ENST00000402813 NEUROD2Q15784 382 aa8.28□□□□□ -1.08
CNGA1-202ENST00000402813 CLSTN1O94985 981 aa8.28□□□□□ -1.08
CNGA1-202ENST00000402813 ZNF428Q96B54 188 aa8.28□□□□□ -1.08
CNGA1-202ENST00000402813 RBM25P49756 843 aaKnown RBP8.27□□□□□ -1.09
CNGA1-202ENST00000402813 CC2D2BQ6DHV5 1058 aa8.27□□□□□ -1.09
CNGA1-202ENST00000402813 FAM177A1Q8N128 213 aaPredicted RBP8.27□□□□□ -1.09
CNGA1-202ENST00000402813 DCAF1Q9Y4B6 1507 aa8.26□□□□□ -1.09
CNGA1-202ENST00000402813 TRAIPQ9BWF2 469 aa8.26□□□□□ -1.09
CNGA1-202ENST00000402813 ZNF592Q92610 1267 aa8.24□□□□□ -1.09
CNGA1-202ENST00000402813 PSMD1Q99460 953 aa8.23□□□□□ -1.09
CNGA1-202ENST00000402813 BRPF3Q9ULD4 1205 aa8.23□□□□□ -1.09
CNGA1-202ENST00000402813 FOXD4L5Q5VV16 416 aaPredicted RBP8.22□□□□□ -1.09
CNGA1-202ENST00000402813 FOXD4L4Q8WXT5 416 aaPredicted RBP8.22□□□□□ -1.09
CNGA1-202ENST00000402813 ARID3CA6NKF2 412 aa8.22□□□□□ -1.09
CNGA1-202ENST00000402813 ZFP91Q96JP5 570 aaPredicted RBP8.22□□□□□ -1.09
CNGA1-202ENST00000402813 CERS3Q8IU89 383 aa8.21□□□□□ -1.09
CNGA1-202ENST00000402813 APBB1O00213 710 aa8.21□□□□□ -1.1
CNGA1-202ENST00000402813 LMOD2Q6P5Q4 547 aa8.2□□□□□ -1.1
CNGA1-202ENST00000402813 E9PSI1 815 aa8.2□□□□□ -1.1
CNGA1-202ENST00000402813 ECM2O94769 699 aaPredicted RBP8.2□□□□□ -1.1
CNGA1-202ENST00000402813 MFAP1P55081 439 aaKnown RBP8.2□□□□□ -1.1
CNGA1-202ENST00000402813 TMCO4Q5TGY1 634 aa8.2□□□□□ -1.1
CNGA1-202ENST00000402813 CWC22Q9HCG8 908 aaKnown RBP8.19□□□□□ -1.1
CNGA1-202ENST00000402813 USP35Q9P2H5 1018 aa8.19□□□□□ -1.1
CNGA1-202ENST00000402813 TMED8Q6PL24 325 aaPredicted RBP8.14□□□□□ -1.11
CNGA1-202ENST00000402813 RGL2O15211 777 aa8.14□□□□□ -1.11
CNGA1-202ENST00000402813 CCDC125Q86Z20 511 aa8.14□□□□□ -1.11
CNGA1-202ENST00000402813 ZCCHC6Q5VYS8 1495 aaKnown RBP8.13□□□□□ -1.11
CNGA1-202ENST00000402813 IRX6P78412 446 aaPredicted RBP8.12□□□□□ -1.11
CNGA1-202ENST00000402813 CCDC136Q96JN2 1154 aa8.12□□□□□ -1.11
CNGA1-202ENST00000402813 MSH5O43196 834 aa8.12□□□□□ -1.11
CNGA1-202ENST00000402813 NAP1L5Q96NT1 182 aaPredicted RBP8.12□□□□□ -1.11
CNGA1-202ENST00000402813 PPM1GO15355 546 aaPredicted RBP8.11□□□□□ -1.11
CNGA1-202ENST00000402813 AAMPQ13685 434 aa8.11□□□□□ -1.11
CNGA1-202ENST00000402813 ARID4BQ4LE39 1312 aaPredicted RBP8.1□□□□□ -1.11
CNGA1-202ENST00000402813 ZEB1P37275 1124 aaPredicted RBP8.1□□□□□ -1.11
CNGA1-202ENST00000402813 AEBP1Q8IUX7 1158 aa8.1□□□□□ -1.11
CNGA1-202ENST00000402813 CCDC82Q8N4S0 544 aa8.1□□□□□ -1.11
CNGA1-202ENST00000402813 PRDM16Q9HAZ2 1276 aa8.1□□□□□ -1.11
CNGA1-202ENST00000402813 GZF1Q9H116 711 aaPredicted RBP8.08□□□□□ -1.12
CNGA1-202ENST00000402813 CCDC27Q2M243 656 aa8.08□□□□□ -1.12
CNGA1-202ENST00000402813 PROM2Q8N271 834 aa8.08□□□□□ -1.12
CNGA1-202ENST00000402813 MYO15BQ96JP2 1530 aa8.08□□□□□ -1.12
CNGA1-202ENST00000402813 TEX2Q8IWB9 1127 aa8.07□□□□□ -1.12
CNGA1-202ENST00000402813 SLC24A3Q9HC58 644 aa8.07□□□□□ -1.12
CNGA1-202ENST00000402813 ZC3H15Q8WU90 426 aaKnown RBP8.06□□□□□ -1.12
CNGA1-202ENST00000402813 CHGAP10645 457 aaKnown RBP8.06□□□□□ -1.12
CNGA1-202ENST00000402813 SETQ01105 290 aaPredicted RBP8.06□□□□□ -1.12
CNGA1-202ENST00000402813 CADPSQ9ULU8 1353 aa8.05□□□□□ -1.12
CNGA1-202ENST00000402813 NCLP19338 710 aaKnown RBP8.04□□□□□ -1.12
CNGA1-202ENST00000402813 CANXP27824 592 aaKnown RBP8.04□□□□□ -1.12
CNGA1-202ENST00000402813 PIAS4Q8N2W9 510 aaPredicted RBP8.04□□□□□ -1.12
CNGA1-202ENST00000402813 MYCNP04198 464 aaPredicted RBP8.03□□□□□ -1.12
CNGA1-202ENST00000402813 A0A0U1RQG5 324 aaPredicted RBP8.02□□□□□ -1.13
CNGA1-202ENST00000402813 CENPBP07199 599 aaPredicted RBP8.02□□□□□ -1.13
CNGA1-202ENST00000402813 SLC4A2P04920 1241 aa8.01□□□□□ -1.13
CNGA1-202ENST00000402813 MKRN3Q13064 507 aaKnown RBP8.01□□□□□ -1.13
CNGA1-202ENST00000402813 P3H3Q8IVL6 736 aa8□□□□□ -1.13
CNGA1-202ENST00000402813 MAFGO15525 162 aa8□□□□□ -1.13
CNGA1-202ENST00000402813 MAPK8IP2Q13387 824 aaPredicted RBP7.99□□□□□ -1.13
CNGA1-202ENST00000402813 PLCD4Q9BRC7 762 aa7.99□□□□□ -1.13
CNGA1-202ENST00000402813 AMOTL2Q9Y2J4 779 aa7.99□□□□□ -1.13
CNGA1-202ENST00000402813 BARGINQ6ZT62 677 aa7.98□□□□□ -1.13
CNGA1-202ENST00000402813 ANO8Q9HCE9 1232 aaPredicted RBP7.98□□□□□ -1.13
CNGA1-202ENST00000402813 ZNF316A6NFI3 1004 aaPredicted RBP7.98□□□□□ -1.13
CNGA1-202ENST00000402813 KDM4AO75164 1064 aa7.96□□□□□ -1.14
CNGA1-202ENST00000402813 CHRM1P11229 460 aaPredicted RBP7.96□□□□□ -1.14
CNGA1-202ENST00000402813 SPOCK2Q92563 424 aa7.96□□□□□ -1.14
CNGA1-202ENST00000402813 IGSF5Q9NSI5 407 aa7.95□□□□□ -1.14
CNGA1-202ENST00000402813 HS6ST3Q8IZP7 471 aa7.95□□□□□ -1.14
CNGA1-202ENST00000402813 ZNF526Q8TF50 670 aaPredicted RBP7.94□□□□□ -1.14
CNGA1-202ENST00000402813 GRIPAP1Q4V328 841 aa7.94□□□□□ -1.14
CNGA1-202ENST00000402813 TRAK2O60296 914 aa7.93□□□□□ -1.14
CNGA1-202ENST00000402813 EXOC8Q8IYI6 725 aa7.93□□□□□ -1.14
CNGA1-202ENST00000402813 PLEKHD1A6NEE1 506 aa7.92□□□□□ -1.14
CNGA1-202ENST00000402813 A6NJR5 290 aa7.92□□□□□ -1.14
CNGA1-202ENST00000402813 IRF5Q13568 498 aa7.92□□□□□ -1.14
CNGA1-202ENST00000402813 PTMSP20962 102 aa7.92□□□□□ -1.14
CNGA1-202ENST00000402813 LOC102724159A0A0B4J2E5 919 aa7.92□□□□□ -1.14
CNGA1-202ENST00000402813 ANAPC15P60006 121 aa7.92□□□□□ -1.14
CNGA1-202ENST00000402813 PWP2Q15269 919 aaKnown RBP7.92□□□□□ -1.14
CNGA1-202ENST00000402813 IL27Q8NEV9 243 aa7.92□□□□□ -1.14
CNGA1-202ENST00000402813 FBXW7Q969H0 707 aa7.92□□□□□ -1.14
CNGA1-202ENST00000402813 PRDM10Q9NQV6 1147 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms