RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 LINC01590Q5TEZ4 76 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 ATP5EP2Q5VTU8 51 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 Q5VV11 94 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 SCXQ7RTU7 201 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 Q8N6K4 173 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 DYNLRB2Q8TF09 96 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 PHLDA3Q9Y5J5 127 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 TIMM8BQ9Y5J9 83 aaPredicted RBP2.47□□□□□ -2.01
GDE1-202ENST00000563645 PIGBOS1A0A0B4J2F0 54 aa2.46□□□□□ -2.02
GDE1-202ENST00000563645 IGKV1-12A0A0C4DH73 117 aa2.46□□□□□ -2.02
GDE1-202ENST00000563645 A0A0J9YY99 117 aa2.46□□□□□ -2.02
GDE1-202ENST00000563645 PCNX2A6NKB5 2137 aa2.46□□□□□ -2.02
GDE1-202ENST00000563645 HCG22E2RYF7 251 aa2.46□□□□□ -2.02
GDE1-202ENST00000563645 C5orf67F2Z3F1 127 aa2.46□□□□□ -2.02
GDE1-202ENST00000563645 HMGN4O00479 90 aa2.46□□□□□ -2.02
GDE1-202ENST00000563645 ERC2-IT1O76042 136 aa2.46□□□□□ -2.02
GDE1-202ENST00000563645 IGKV1D-12P01611 117 aa2.46□□□□□ -2.02
GDE1-202ENST00000563645 SAA1P0DJI8 122 aaPredicted RBP2.46□□□□□ -2.02
GDE1-202ENST00000563645 ARL14EPLP0DKL9 152 aa2.46□□□□□ -2.02
GDE1-202ENST00000563645 COX6B1P14854 86 aa2.46□□□□□ -2.02
GDE1-202ENST00000563645 BSPH1Q075Z2 132 aa2.46□□□□□ -2.02
GDE1-202ENST00000563645 SPANXN1Q5VSR9 72 aa2.46□□□□□ -2.02
GDE1-202ENST00000563645 C11orf71Q6IPW1 123 aa2.46□□□□□ -2.02
GDE1-202ENST00000563645 ZNF826PQ6ZT77 177 aa2.46□□□□□ -2.02
GDE1-202ENST00000563645 KLF14Q8TD94 323 aaPredicted RBP2.46□□□□□ -2.02
GDE1-202ENST00000563645 FAM167A-AS1Q96KT0 104 aa2.46□□□□□ -2.02
GDE1-202ENST00000563645 SND1-IT1Q9HBX3 110 aa2.46□□□□□ -2.02
GDE1-202ENST00000563645 COL5A1P20908 1838 aaPredicted RBP2.45□□□□□ -2.02
GDE1-202ENST00000563645 MPDZO75970 2070 aa2.45□□□□□ -2.02
GDE1-202ENST00000563645 IGHV1-45A0A0A0MS14 117 aa2.45□□□□□ -2.02
GDE1-202ENST00000563645 TRAV40A0A0B4J280 105 aa2.45□□□□□ -2.02
GDE1-202ENST00000563645 C19orf84I3L1E1 186 aa2.45□□□□□ -2.02
GDE1-202ENST00000563645 SH2D1AO60880 128 aa2.45□□□□□ -2.02
GDE1-202ENST00000563645 TFF3Q07654 80 aa2.45□□□□□ -2.02
GDE1-202ENST00000563645 C17orf82Q86X59 251 aaPredicted RBP2.45□□□□□ -2.02
GDE1-202ENST00000563645 ORMDL3Q8N138 153 aa2.45□□□□□ -2.02
GDE1-202ENST00000563645 ARHGAP5-AS1Q96IT6 56 aa2.45□□□□□ -2.02
GDE1-202ENST00000563645 CYP4F30PQ9H0H9 118 aa2.45□□□□□ -2.02
GDE1-202ENST00000563645 LINC00574Q9H8X3 128 aa2.45□□□□□ -2.02
GDE1-202ENST00000563645 ZNF355PQ9NSJ1 428 aa2.45□□□□□ -2.02
GDE1-202ENST00000563645 SNURFQ9Y675 71 aa2.45□□□□□ -2.02
GDE1-202ENST00000563645 IGHV3OR16-13A0A075B7E8 117 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 TRAV12-1A0A0B4J245 112 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 IGKV6-21A0A0C4DH24 114 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 ZNF815PA8K554 130 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 B4DSR2 109 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 LEPROTO15243 131 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 COX6CP09669 75 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 IAPPP10997 89 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 PLNP26678 52 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 ZNF137PP52743 207 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 SPTSSBQ8NFR3 76 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 RPP21Q9H633 154 aaKnown RBP2.44□□□□□ -2.02
GDE1-202ENST00000563645 CDC42SE1Q9NRR8 79 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 TMEM167BQ9NRX6 74 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 C22orf24Q9Y442 160 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 TMEM14AQ9Y6G1 99 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 ICOSQ9Y6W8 199 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 NACAE9PAV3 2078 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 TET1Q8NFU7 2136 aa2.44□□□□□ -2.02
GDE1-202ENST00000563645 DSCAML1Q8TD84 2053 aa2.43□□□□□ -2.02
GDE1-202ENST00000563645 DSCAMO60469 2012 aa2.43□□□□□ -2.02
GDE1-202ENST00000563645 TRAV23DV6A0A075B6W5 121 aa2.43□□□□□ -2.02
GDE1-202ENST00000563645 TRBV7-4A0A0J9YYF1 115 aa2.43□□□□□ -2.02
GDE1-202ENST00000563645 SDHAF1A6NFY7 115 aa2.43□□□□□ -2.02
GDE1-202ENST00000563645 CCL22O00626 93 aa2.43□□□□□ -2.02
GDE1-202ENST00000563645 IGLV1-51P01701 117 aa2.43□□□□□ -2.02
GDE1-202ENST00000563645 BAALC-AS2P0C853 105 aa2.43□□□□□ -2.02
GDE1-202ENST00000563645 ZNF32P17041 273 aa2.43□□□□□ -2.02
GDE1-202ENST00000563645 EIF4EBP1Q13541 118 aaPredicted RBP2.43□□□□□ -2.02
GDE1-202ENST00000563645 MOBPQ13875 183 aa2.43□□□□□ -2.02
GDE1-202ENST00000563645 C9orf116Q5BN46 136 aaPredicted RBP2.43□□□□□ -2.02
GDE1-202ENST00000563645 Q6ZS52 159 aa2.43□□□□□ -2.02
GDE1-202ENST00000563645 MIR17HGQ75NE6 70 aa2.43□□□□□ -2.02
GDE1-202ENST00000563645 IMMP1LQ96LU5 166 aa2.43□□□□□ -2.02
GDE1-202ENST00000563645 TMEM14BQ9NUH8 114 aa2.43□□□□□ -2.02
GDE1-202ENST00000563645 DPM3Q9P2X0 92 aa2.43□□□□□ -2.02
GDE1-202ENST00000563645 COL4A4P53420 1690 aaPredicted RBP2.43□□□□□ -2.02
GDE1-202ENST00000563645 TNRC6CQ9HCJ0 1690 aaKnown RBP2.43□□□□□ -2.02
GDE1-202ENST00000563645 LTBP1Q14766 1721 aa2.42□□□□□ -2.02
GDE1-202ENST00000563645 IGLV8-61A0A075B6I0 122 aa2.42□□□□□ -2.02
GDE1-202ENST00000563645 IGHV5-10-1A0A0J9YXX1 117 aa2.42□□□□□ -2.02
GDE1-202ENST00000563645 C11orf86A6NJI1 115 aa2.42□□□□□ -2.02
GDE1-202ENST00000563645 F8VRH5 84 aa2.42□□□□□ -2.02
GDE1-202ENST00000563645 H3BSH0 61 aa2.42□□□□□ -2.02
GDE1-202ENST00000563645 M0R135 149 aa2.42□□□□□ -2.02
GDE1-202ENST00000563645 IGHV3-43DP0DP04 118 aa2.42□□□□□ -2.02
GDE1-202ENST00000563645 DEFA4P12838 97 aa2.42□□□□□ -2.02
GDE1-202ENST00000563645 CCL5P13501 91 aa2.42□□□□□ -2.02
GDE1-202ENST00000563645 FXYD4P59646 89 aa2.42□□□□□ -2.02
GDE1-202ENST00000563645 SPANXN5Q5MJ07 72 aa2.42□□□□□ -2.02
GDE1-202ENST00000563645 C14orf178Q8N769 122 aaPredicted RBP2.42□□□□□ -2.02
GDE1-202ENST00000563645 LINC01560Q8TB33 94 aa2.42□□□□□ -2.02
GDE1-202ENST00000563645 OBSCN-AS1Q96MR7 158 aa2.42□□□□□ -2.02
GDE1-202ENST00000563645 LINC00846Q9NV44 126 aa2.42□□□□□ -2.02
GDE1-202ENST00000563645 ESPL1Q14674 2120 aa2.42□□□□□ -2.02
GDE1-202ENST00000563645 MUC22E2RYF6 1773 aaPredicted RBP2.41□□□□□ -2.02
GDE1-202ENST00000563645 CABIN1Q9Y6J0 2220 aa2.41□□□□□ -2.02
GDE1-202ENST00000563645 SSC5DA1L4H1 1573 aa2.41□□□□□ -2.02
GDE1-202ENST00000563645 A0A1B0GUT8 65 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms