RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 SDIM1Q6ZPB5 146 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 Q6ZQT7 251 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 GPHB5Q86YW7 130 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 APRG1Q8IVJ8 170 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 TMEM61Q8N0U2 210 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 C20orf203Q8NBC4 194 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 DCANP1Q8TF63 244 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 USMG5Q96IX5 58 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 NDUFA12Q9UI09 145 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 CABIN1Q9Y6J0 2220 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 FREM1Q5H8C1 2179 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 MED12Q93074 2177 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 AGRNO00468 2067 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 ASXL3Q9C0F0 2248 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 HEATR1Q9H583 2144 aaKnown RBP2.53□□□□□ -2
CSMD3-209ENST00000519485 TRBV10-3A0A0K0K1G6 114 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 RBMY1BA6NDE4 496 aaKnown RBP2.53□□□□□ -2
CSMD3-209ENST00000519485 RBMY1EA6NEQ0 496 aaKnown RBP2.53□□□□□ -2
CSMD3-209ENST00000519485 A8MU10 97 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 JMJD7-PLA2G4BH0Y9G9 81 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 NDUFA4O00483 81 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 SOCS3O14543 225 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 NDUFA1O15239 70 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 TGFAP01135 160 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 IGHG2P01859 326 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 CRYGDP07320 174 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 RBMY1DP0C7P1 496 aaKnown RBP2.53□□□□□ -2
CSMD3-209ENST00000519485 RBMY1A1P0DJD3 496 aaKnown RBP2.53□□□□□ -2
CSMD3-209ENST00000519485 RBMY1CP0DJD4 496 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 IGHV3-30-3P0DP02 117 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 CD28P10747 220 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 COX7A1P24310 79 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 SYNJ2BPP57105 145 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 NPC2P61916 151 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 KLRB1Q12918 225 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 Q6ZRP5 223 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 DPH3Q96FX2 82 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 AMELXQ99217 191 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 PRR34Q9NV39 138 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 ZNRD1Q9P1U0 126 aa2.53□□□□□ -2
CSMD3-209ENST00000519485 GOLGB1Q14789 3259 aaKnown RBP2.52□□□□□ -2.01
CSMD3-209ENST00000519485 ODF3BA8MYP8 253 aa2.52□□□□□ -2.01
CSMD3-209ENST00000519485 K7EMT4 169 aa2.52□□□□□ -2.01
CSMD3-209ENST00000519485 PSMB8P28062 276 aa2.52□□□□□ -2.01
CSMD3-209ENST00000519485 SNRPD3P62318 126 aaKnown RBP2.52□□□□□ -2.01
CSMD3-209ENST00000519485 HIST1H4AP62805 103 aaKnown RBP2.52□□□□□ -2.01
CSMD3-209ENST00000519485 BSPH1Q075Z2 132 aa2.52□□□□□ -2.01
CSMD3-209ENST00000519485 LYPD2Q6UXB3 125 aa2.52□□□□□ -2.01
CSMD3-209ENST00000519485 Q8N6K4 173 aa2.52□□□□□ -2.01
CSMD3-209ENST00000519485 ZFAND2AQ8N6M9 145 aa2.52□□□□□ -2.01
CSMD3-209ENST00000519485 PRSS33Q8NF86 280 aa2.52□□□□□ -2.01
CSMD3-209ENST00000519485 ITLN2Q8WWU7 325 aaPredicted RBP2.52□□□□□ -2.01
CSMD3-209ENST00000519485 RPL39LQ96EH5 51 aaKnown RBP2.52□□□□□ -2.01
CSMD3-209ENST00000519485 FAM19A4Q96LR4 140 aa2.52□□□□□ -2.01
CSMD3-209ENST00000519485 CTSZQ9UBR2 303 aa2.52□□□□□ -2.01
CSMD3-209ENST00000519485 PRO0628Q9UI54 55 aa2.52□□□□□ -2.01
CSMD3-209ENST00000519485 SERP1Q9Y6X1 66 aa2.52□□□□□ -2.01
CSMD3-209ENST00000519485 KIF25-AS1Q9Y6Z4 181 aa2.52□□□□□ -2.01
CSMD3-209ENST00000519485 CACNA1EQ15878 2313 aa2.52□□□□□ -2.01
CSMD3-209ENST00000519485 TNCP24821 2201 aa2.52□□□□□ -2.01
CSMD3-209ENST00000519485 SDK2Q58EX2 2172 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 PRR14LQ5THK1 2151 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 DOCK10Q96BY6 2186 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 DSCAMO60469 2012 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 KNL1Q8NG31 2342 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 IGLV4-3A0A075B6K6 122 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 TRAV12-2A0A075B6T6 113 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 IGHV7-81A0A0B4J1V7 117 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 LOC107984640A0A0U1RRK4 108 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 KLLNB2CW77 178 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 F5H768 121 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 F8WDY8 70 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 M0QY20 66 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 CRPP02741 224 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 RNASE3P12724 160 aaKnown RBP2.51□□□□□ -2.01
CSMD3-209ENST00000519485 RPL35AP18077 110 aaKnown RBP2.51□□□□□ -2.01
CSMD3-209ENST00000519485 PDE6GP18545 87 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 ATP5J2P56134 94 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 DAZ2Q13117 558 aaKnown RBP2.51□□□□□ -2.01
CSMD3-209ENST00000519485 RBMY1FQ15415 496 aaKnown RBP2.51□□□□□ -2.01
CSMD3-209ENST00000519485 CLEC19AQ6UXS0 136 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 VMO1Q7Z5L0 202 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 DAZ4Q86SG3 579 aaKnown RBP2.51□□□□□ -2.01
CSMD3-209ENST00000519485 Q8NBF4 154 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 FDCSPQ8NFU4 85 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 UBL5Q9BZL1 73 aa2.51□□□□□ -2.01
CSMD3-209ENST00000519485 DAZ1Q9NQZ3 744 aaKnown RBP2.51□□□□□ -2.01
CSMD3-209ENST00000519485 DAZ3Q9NR90 486 aaKnown RBP2.51□□□□□ -2.01
CSMD3-209ENST00000519485 GON4LQ3T8J9 2241 aa2.5□□□□□ -2.01
CSMD3-209ENST00000519485 SMIM26A0A096LP01 95 aa2.5□□□□□ -2.01
CSMD3-209ENST00000519485 TRAV41A0A0B4J266 112 aa2.5□□□□□ -2.01
CSMD3-209ENST00000519485 A0A0J9YXV3 536 aa2.5□□□□□ -2.01
CSMD3-209ENST00000519485 KNCNA6PVL3 124 aa2.5□□□□□ -2.01
CSMD3-209ENST00000519485 TMEM256-PLSCR3K7ERE1 68 aa2.5□□□□□ -2.01
CSMD3-209ENST00000519485 RTL8CO15255 209 aa2.5□□□□□ -2.01
CSMD3-209ENST00000519485 DNAH10OSP0CZ25 163 aa2.5□□□□□ -2.01
CSMD3-209ENST00000519485 RPL28P46779 137 aaKnown RBP2.5□□□□□ -2.01
CSMD3-209ENST00000519485 TSPEAR-AS2P59090 65 aa2.5□□□□□ -2.01
CSMD3-209ENST00000519485 LINC00315P59091 139 aa2.5□□□□□ -2.01
CSMD3-209ENST00000519485 KRTAP10-1P60331 282 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms