RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 NTM-AS1Q6ZSK4 140 aa6.95□□□□□ -1.3
PDGFRA-209ENST00000512143 FAM19A2Q8N3H0 131 aa6.95□□□□□ -1.3
PDGFRA-209ENST00000512143 KIR2DL4Q99706 377 aa6.95□□□□□ -1.3
PDGFRA-209ENST00000512143 HIST1H2BLQ99880 126 aa6.95□□□□□ -1.3
PDGFRA-209ENST00000512143 DNAH7Q8WXX0 4024 aa6.94□□□□□ -1.3
PDGFRA-209ENST00000512143 TRAV10A0A0B4J240 114 aa6.94□□□□□ -1.3
PDGFRA-209ENST00000512143 IGHV3-38A0A0C4DH36 116 aa6.94□□□□□ -1.3
PDGFRA-209ENST00000512143 LOC105371267A0A1B0GV96 52 aa6.94□□□□□ -1.3
PDGFRA-209ENST00000512143 FCER1GP30273 86 aa6.94□□□□□ -1.3
PDGFRA-209ENST00000512143 PMCHL1Q16048 86 aa6.94□□□□□ -1.3
PDGFRA-209ENST00000512143 ORMDL2Q53FV1 153 aa6.94□□□□□ -1.3
PDGFRA-209ENST00000512143 PDZD11Q5EBL8 140 aa6.94□□□□□ -1.3
PDGFRA-209ENST00000512143 PHLDA1Q8WV24 401 aaPredicted RBP6.94□□□□□ -1.3
PDGFRA-209ENST00000512143 GTSF1LQ9H1H1 148 aa6.94□□□□□ -1.3
PDGFRA-209ENST00000512143 A0A096LPF7 62 aa6.93□□□□□ -1.3
PDGFRA-209ENST00000512143 A6NJY4 79 aa6.93□□□□□ -1.3
PDGFRA-209ENST00000512143 AMTP48728 403 aa6.93□□□□□ -1.3
PDGFRA-209ENST00000512143 DEFB104AQ8WTQ1 72 aa6.93□□□□□ -1.3
PDGFRA-209ENST00000512143 CHCHD7Q9BUK0 85 aa6.93□□□□□ -1.3
PDGFRA-209ENST00000512143 TGP01266 2768 aa6.92□□□□□ -1.3
PDGFRA-209ENST00000512143 NUDT3O95989 172 aa6.92□□□□□ -1.3
PDGFRA-209ENST00000512143 HBDP02042 147 aa6.92□□□□□ -1.3
PDGFRA-209ENST00000512143 COTL1Q14019 142 aa6.92□□□□□ -1.3
PDGFRA-209ENST00000512143 MRPL23Q16540 153 aaKnown RBP6.92□□□□□ -1.3
PDGFRA-209ENST00000512143 C20orf203Q8NBC4 194 aa6.92□□□□□ -1.3
PDGFRA-209ENST00000512143 ATP6V0E2Q8NHE4 81 aa6.92□□□□□ -1.3
PDGFRA-209ENST00000512143 TMEM18Q96B42 140 aa6.92□□□□□ -1.3
PDGFRA-209ENST00000512143 FABP4P15090 132 aa6.91□□□□□ -1.3
PDGFRA-209ENST00000512143 S100A2P29034 98 aa6.91□□□□□ -1.3
PDGFRA-209ENST00000512143 LINC00173Q6ZV60 143 aa6.91□□□□□ -1.3
PDGFRA-209ENST00000512143 SH2D6Q7Z4S9 175 aa6.91□□□□□ -1.3
PDGFRA-209ENST00000512143 TOMM6Q96B49 74 aa6.91□□□□□ -1.3
PDGFRA-209ENST00000512143 ICOSQ9Y6W8 199 aa6.91□□□□□ -1.3
PDGFRA-209ENST00000512143 PLECQ15149 4684 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-209ENST00000512143 TRBV6-8A0A0A6YYG3 113 aa6.9□□□□□ -1.3
PDGFRA-209ENST00000512143 IGIPA6NJ69 53 aa6.9□□□□□ -1.3
PDGFRA-209ENST00000512143 BTF3P20290 206 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-209ENST00000512143 G0S2P27469 103 aa6.9□□□□□ -1.3
PDGFRA-209ENST00000512143 TIRAPP58753 221 aa6.9□□□□□ -1.3
PDGFRA-209ENST00000512143 TMEM97Q5BJF2 176 aa6.9□□□□□ -1.3
PDGFRA-209ENST00000512143 C2orf66Q6UXQ4 117 aa6.9□□□□□ -1.3
PDGFRA-209ENST00000512143 CSMD3Q7Z407 3707 aa6.89□□□□□ -1.31
PDGFRA-209ENST00000512143 LINC01549A6NIU2 74 aa6.89□□□□□ -1.31
PDGFRA-209ENST00000512143 LEPROTL1O95214 131 aa6.89□□□□□ -1.31
PDGFRA-209ENST00000512143 RPL39P62891 51 aaKnown RBP6.89□□□□□ -1.31
PDGFRA-209ENST00000512143 FAM104AQ969W3 186 aa6.89□□□□□ -1.31
PDGFRA-209ENST00000512143 CYSLTR1Q9Y271 337 aa6.89□□□□□ -1.31
PDGFRA-209ENST00000512143 LCE2BO14633 110 aa6.88□□□□□ -1.31
PDGFRA-209ENST00000512143 LYPD5Q6UWN5 251 aa6.88□□□□□ -1.31
PDGFRA-209ENST00000512143 ERASQ7Z444 233 aa6.88□□□□□ -1.31
PDGFRA-209ENST00000512143 C15orf53Q8NAA6 179 aa6.88□□□□□ -1.31
PDGFRA-209ENST00000512143 OR10D4PQ8NGN7 298 aa6.88□□□□□ -1.31
PDGFRA-209ENST00000512143 TMEM243Q9BU79 118 aa6.88□□□□□ -1.31
PDGFRA-209ENST00000512143 TIMM21Q9BVV7 248 aa6.88□□□□□ -1.31
PDGFRA-209ENST00000512143 HSPB8Q9UJY1 196 aa6.88□□□□□ -1.31
PDGFRA-209ENST00000512143 PYGO1Q9Y3Y4 419 aa6.88□□□□□ -1.31
PDGFRA-209ENST00000512143 STARD9Q9P2P6 4700 aa6.88□□□□□ -1.31
PDGFRA-209ENST00000512143 TRBV25-1A0A075B6N4 114 aa6.87□□□□□ -1.31
PDGFRA-209ENST00000512143 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.87□□□□□ -1.31
PDGFRA-209ENST00000512143 IGKV2-29A2NJV5 120 aaPredicted RBP6.87□□□□□ -1.31
PDGFRA-209ENST00000512143 H7C423 109 aa6.87□□□□□ -1.31
PDGFRA-209ENST00000512143 ATP5LO75964 103 aa6.87□□□□□ -1.31
PDGFRA-209ENST00000512143 NPSP0C0P6 89 aa6.87□□□□□ -1.31
PDGFRA-209ENST00000512143 LELP1Q5T871 98 aa6.87□□□□□ -1.31
PDGFRA-209ENST00000512143 CEMP1Q6PRD7 247 aaPredicted RBP6.87□□□□□ -1.31
PDGFRA-209ENST00000512143 SPATA12Q7Z6I5 190 aa6.87□□□□□ -1.31
PDGFRA-209ENST00000512143 MRPL52Q86TS9 123 aaKnown RBP6.87□□□□□ -1.31
PDGFRA-209ENST00000512143 IFI27L1Q96BM0 104 aa6.87□□□□□ -1.31
PDGFRA-209ENST00000512143 SCGB3A1Q96QR1 104 aa6.87□□□□□ -1.31
PDGFRA-209ENST00000512143 TIMM17AQ99595 171 aa6.87□□□□□ -1.31
PDGFRA-209ENST00000512143 UBE2D4Q9Y2X8 147 aa6.87□□□□□ -1.31
PDGFRA-209ENST00000512143 CSDC2Q9Y534 153 aaKnown RBP6.87□□□□□ -1.31
PDGFRA-209ENST00000512143 C3orf79P0CE67 100 aa6.86□□□□□ -1.31
PDGFRA-209ENST00000512143 ESRGQ1W209 222 aa6.86□□□□□ -1.31
PDGFRA-209ENST00000512143 Q8N976 141 aa6.86□□□□□ -1.31
PDGFRA-209ENST00000512143 TMEM141Q96I45 108 aa6.86□□□□□ -1.31
PDGFRA-209ENST00000512143 SPANXA1Q9NS26 97 aa6.86□□□□□ -1.31
PDGFRA-209ENST00000512143 TENM2Q9NT68 2774 aa6.85□□□□□ -1.31
PDGFRA-209ENST00000512143 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-209ENST00000512143 SYS1-DBNDD2H3BUS1 97 aa6.85□□□□□ -1.31
PDGFRA-209ENST00000512143 FGF6P10767 208 aa6.85□□□□□ -1.31
PDGFRA-209ENST00000512143 MRPS36P82909 103 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-209ENST00000512143 APLNQ9ULZ1 77 aa6.85□□□□□ -1.31
PDGFRA-209ENST00000512143 VPS13DQ5THJ4 4388 aa6.85□□□□□ -1.31
PDGFRA-209ENST00000512143 IGLV4-3A0A075B6K6 122 aa6.84□□□□□ -1.31
PDGFRA-209ENST00000512143 IGLL5B9A064 214 aa6.84□□□□□ -1.31
PDGFRA-209ENST00000512143 BAALCQ8WXS3 180 aa6.84□□□□□ -1.31
PDGFRA-209ENST00000512143 OPRPNQ99935 248 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-209ENST00000512143 MAP1LC3CQ9BXW4 147 aa6.84□□□□□ -1.31
PDGFRA-209ENST00000512143 A0A1B0GUV1 79 aa6.83□□□□□ -1.32
PDGFRA-209ENST00000512143 NUPR2A6NF83 97 aa6.83□□□□□ -1.32
PDGFRA-209ENST00000512143 ZNF25P17030 456 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-209ENST00000512143 KRTDAPP60985 99 aa6.83□□□□□ -1.32
PDGFRA-209ENST00000512143 GAGE6Q13070 117 aa6.83□□□□□ -1.32
PDGFRA-209ENST00000512143 JOSD1Q15040 202 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-209ENST00000512143 PET117Q6UWS5 81 aa6.83□□□□□ -1.32
PDGFRA-209ENST00000512143 AMELXQ99217 191 aa6.83□□□□□ -1.32
PDGFRA-209ENST00000512143 CHCHD5Q9BSY4 110 aa6.83□□□□□ -1.32
PDGFRA-209ENST00000512143 CDC42SE2Q9NRR3 84 aa6.83□□□□□ -1.32
PDGFRA-209ENST00000512143 DNAH1Q9P2D7 4330 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms