RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 DYNC2H1Q8NCM8 4307 aaKnown RBP6.73□□□□□ -1.33
RIF1-202ENST00000414861 HSBP1O75506 76 aa6.73□□□□□ -1.33
RIF1-202ENST00000414861 KIR2DL4Q99706 377 aa6.73□□□□□ -1.33
RIF1-202ENST00000414861 LAGE3Q14657 143 aa6.72□□□□□ -1.33
RIF1-202ENST00000414861 NTM-AS1Q6ZSK4 140 aa6.72□□□□□ -1.33
RIF1-202ENST00000414861 DAZ4Q86SG3 579 aaKnown RBP6.72□□□□□ -1.33
RIF1-202ENST00000414861 DAZ3Q9NR90 486 aaKnown RBP6.72□□□□□ -1.33
RIF1-202ENST00000414861 AMTP48728 403 aa6.72□□□□□ -1.33
RIF1-202ENST00000414861 FCER1GP30273 86 aa6.71□□□□□ -1.34
RIF1-202ENST00000414861 COTL1Q14019 142 aa6.71□□□□□ -1.34
RIF1-202ENST00000414861 ATP6V0E2Q8NHE4 81 aa6.71□□□□□ -1.34
RIF1-202ENST00000414861 ICOSQ9Y6W8 199 aa6.71□□□□□ -1.34
RIF1-202ENST00000414861 H3BNG1 76 aa6.71□□□□□ -1.34
RIF1-202ENST00000414861 NUDT3O95989 172 aa6.71□□□□□ -1.34
RIF1-202ENST00000414861 MRPL23Q16540 153 aaKnown RBP6.71□□□□□ -1.34
RIF1-202ENST00000414861 HIST1H2BLQ99880 126 aa6.71□□□□□ -1.34
RIF1-202ENST00000414861 CHCHD7Q9BUK0 85 aa6.71□□□□□ -1.34
RIF1-202ENST00000414861 LYSTQ99698 3801 aa6.7□□□□□ -1.34
RIF1-202ENST00000414861 BTF3P20290 206 aaKnown RBP6.7□□□□□ -1.34
RIF1-202ENST00000414861 RPL39P62891 51 aaKnown RBP6.7□□□□□ -1.34
RIF1-202ENST00000414861 ORMDL2Q53FV1 153 aa6.7□□□□□ -1.34
RIF1-202ENST00000414861 LINC00173Q6ZV60 143 aa6.7□□□□□ -1.34
RIF1-202ENST00000414861 K7EMI3 77 aa6.7□□□□□ -1.34
RIF1-202ENST00000414861 FABP4P15090 132 aa6.7□□□□□ -1.34
RIF1-202ENST00000414861 HBDP02042 147 aa6.69□□□□□ -1.34
RIF1-202ENST00000414861 PLECQ15149 4684 aaKnown RBP6.69□□□□□ -1.34
RIF1-202ENST00000414861 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.69□□□□□ -1.34
RIF1-202ENST00000414861 IGKV2-29A2NJV5 120 aaPredicted RBP6.69□□□□□ -1.34
RIF1-202ENST00000414861 IGLL5B9A064 214 aa6.69□□□□□ -1.34
RIF1-202ENST00000414861 S100A2P29034 98 aa6.69□□□□□ -1.34
RIF1-202ENST00000414861 C2orf66Q6UXQ4 117 aa6.69□□□□□ -1.34
RIF1-202ENST00000414861 C20orf203Q8NBC4 194 aa6.69□□□□□ -1.34
RIF1-202ENST00000414861 GTSF1LQ9H1H1 148 aa6.69□□□□□ -1.34
RIF1-202ENST00000414861 TRBV6-8A0A0A6YYG3 113 aa6.68□□□□□ -1.34
RIF1-202ENST00000414861 TMEM18Q96B42 140 aa6.68□□□□□ -1.34
RIF1-202ENST00000414861 TOMM6Q96B49 74 aa6.68□□□□□ -1.34
RIF1-202ENST00000414861 TRBV25-1A0A075B6N4 114 aa6.67□□□□□ -1.34
RIF1-202ENST00000414861 CYSLTR1Q9Y271 337 aa6.67□□□□□ -1.34
RIF1-202ENST00000414861 TENM2Q9NT68 2774 aa6.67□□□□□ -1.34
RIF1-202ENST00000414861 LOC105371267A0A1B0GV96 52 aa6.67□□□□□ -1.34
RIF1-202ENST00000414861 LEPROTL1O95214 131 aa6.67□□□□□ -1.34
RIF1-202ENST00000414861 CEMP1Q6PRD7 247 aaPredicted RBP6.67□□□□□ -1.34
RIF1-202ENST00000414861 LYPD5Q6UWN5 251 aa6.67□□□□□ -1.34
RIF1-202ENST00000414861 SH2D6Q7Z4S9 175 aa6.67□□□□□ -1.34
RIF1-202ENST00000414861 TMEM243Q9BU79 118 aa6.67□□□□□ -1.34
RIF1-202ENST00000414861 C15orf53Q8NAA6 179 aa6.66□□□□□ -1.34
RIF1-202ENST00000414861 PACRGQ96M98 296 aaPredicted RBP6.66□□□□□ -1.34
RIF1-202ENST00000414861 ESRGQ1W209 222 aa6.66□□□□□ -1.34
RIF1-202ENST00000414861 Q8N3U1 123 aa6.66□□□□□ -1.34
RIF1-202ENST00000414861 IGIPA6NJ69 53 aa6.65□□□□□ -1.34
RIF1-202ENST00000414861 GAGE6Q13070 117 aa6.65□□□□□ -1.34
RIF1-202ENST00000414861 ZFAND6Q6FIF0 208 aa6.65□□□□□ -1.34
RIF1-202ENST00000414861 OR10D4PQ8NGN7 298 aa6.65□□□□□ -1.34
RIF1-202ENST00000414861 FAM104AQ969W3 186 aa6.65□□□□□ -1.34
RIF1-202ENST00000414861 OPRPNQ99935 248 aaPredicted RBP6.65□□□□□ -1.34
RIF1-202ENST00000414861 CHCHD5Q9BSY4 110 aa6.65□□□□□ -1.34
RIF1-202ENST00000414861 UBE2D4Q9Y2X8 147 aa6.65□□□□□ -1.34
RIF1-202ENST00000414861 TMEM97Q5BJF2 176 aa6.65□□□□□ -1.35
RIF1-202ENST00000414861 LELP1Q5T871 98 aa6.65□□□□□ -1.35
RIF1-202ENST00000414861 SCGB3A1Q96QR1 104 aa6.65□□□□□ -1.35
RIF1-202ENST00000414861 NUPR2A6NF83 97 aa6.64□□□□□ -1.35
RIF1-202ENST00000414861 FGF6P10767 208 aa6.64□□□□□ -1.35
RIF1-202ENST00000414861 SPATA12Q7Z6I5 190 aa6.64□□□□□ -1.35
RIF1-202ENST00000414861 IFI27L1Q96BM0 104 aa6.64□□□□□ -1.35
RIF1-202ENST00000414861 C3orf79P0CE67 100 aa6.64□□□□□ -1.35
RIF1-202ENST00000414861 TIRAPP58753 221 aa6.64□□□□□ -1.35
RIF1-202ENST00000414861 RNASE13Q5GAN3 156 aaKnown RBP6.64□□□□□ -1.35
RIF1-202ENST00000414861 ZC2HC1BQ5TFG8 222 aa6.64□□□□□ -1.35
RIF1-202ENST00000414861 ERASQ7Z444 233 aa6.64□□□□□ -1.35
RIF1-202ENST00000414861 HSPB8Q9UJY1 196 aa6.64□□□□□ -1.35
RIF1-202ENST00000414861 APLNQ9ULZ1 77 aa6.64□□□□□ -1.35
RIF1-202ENST00000414861 H0Y8G0 127 aa6.63□□□□□ -1.35
RIF1-202ENST00000414861 UBE2L6O14933 153 aa6.63□□□□□ -1.35
RIF1-202ENST00000414861 KRTDAPP60985 99 aa6.63□□□□□ -1.35
RIF1-202ENST00000414861 MPV17L2Q567V2 206 aa6.63□□□□□ -1.35
RIF1-202ENST00000414861 Q6ZUT4 128 aa6.63□□□□□ -1.35
RIF1-202ENST00000414861 WFDC10BQ8IUB3 73 aa6.63□□□□□ -1.35
RIF1-202ENST00000414861 IGLV4-3A0A075B6K6 122 aa6.62□□□□□ -1.35
RIF1-202ENST00000414861 G0S2P27469 103 aa6.62□□□□□ -1.35
RIF1-202ENST00000414861 MRPL52Q86TS9 123 aaKnown RBP6.62□□□□□ -1.35
RIF1-202ENST00000414861 MUC7Q8TAX7 377 aa6.62□□□□□ -1.35
RIF1-202ENST00000414861 TIMM17AQ99595 171 aa6.62□□□□□ -1.35
RIF1-202ENST00000414861 SPANXA1Q9NS26 97 aa6.62□□□□□ -1.35
RIF1-202ENST00000414861 IGLV4-60A0A075B6I1 120 aa6.62□□□□□ -1.35
RIF1-202ENST00000414861 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.62□□□□□ -1.35
RIF1-202ENST00000414861 ATP5LO75964 103 aa6.62□□□□□ -1.35
RIF1-202ENST00000414861 AKR1D1P51857 326 aa6.62□□□□□ -1.35
RIF1-202ENST00000414861 Q8N976 141 aa6.62□□□□□ -1.35
RIF1-202ENST00000414861 BAALCQ8WXS3 180 aa6.62□□□□□ -1.35
RIF1-202ENST00000414861 PYGO1Q9Y3Y4 419 aa6.62□□□□□ -1.35
RIF1-202ENST00000414861 LINC00588Q9Y4M8 146 aa6.62□□□□□ -1.35
RIF1-202ENST00000414861 WWC2-AS2Q96NR7 200 aa6.61□□□□□ -1.35
RIF1-202ENST00000414861 TMEM262E9PQX1 116 aa6.61□□□□□ -1.35
RIF1-202ENST00000414861 SYS1-DBNDD2H3BUS1 97 aa6.61□□□□□ -1.35
RIF1-202ENST00000414861 H7C423 109 aa6.61□□□□□ -1.35
RIF1-202ENST00000414861 AMMECR1LQ6DCA0 310 aa6.61□□□□□ -1.35
RIF1-202ENST00000414861 TIMM21Q9BVV7 248 aa6.61□□□□□ -1.35
RIF1-202ENST00000414861 KLK5Q9Y337 293 aaPredicted RBP6.61□□□□□ -1.35
RIF1-202ENST00000414861 LINC01549A6NIU2 74 aa6.6□□□□□ -1.35
RIF1-202ENST00000414861 RBX1P62877 108 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms