RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 TMEM61Q8N0U2 210 aa8.66□□□□□ -1.02
USF1-208ENST00000528768 Q8N1Y9 231 aa8.66□□□□□ -1.02
USF1-208ENST00000528768 TOMM6Q96B49 74 aa8.66□□□□□ -1.02
USF1-208ENST00000528768 ZMAT4Q9H898 229 aa8.66□□□□□ -1.02
USF1-208ENST00000528768 KIF25-AS1Q9Y6Z4 181 aa8.66□□□□□ -1.02
USF1-208ENST00000528768 A0A087WX48 190 aa8.65□□□□□ -1.02
USF1-208ENST00000528768 TRBV6-5A0A0K0K1A5 114 aa8.65□□□□□ -1.02
USF1-208ENST00000528768 KNCNA6PVL3 124 aa8.65□□□□□ -1.02
USF1-208ENST00000528768 CCL24O00175 119 aa8.65□□□□□ -1.02
USF1-208ENST00000528768 ZNF25P17030 456 aaPredicted RBP8.65□□□□□ -1.02
USF1-208ENST00000528768 ZNF415Q09FC8 603 aa8.65□□□□□ -1.02
USF1-208ENST00000528768 ZNF56Q15929 161 aa8.65□□□□□ -1.02
USF1-208ENST00000528768 SUMO4Q6EEV6 95 aa8.65□□□□□ -1.02
USF1-208ENST00000528768 PTH2Q96A98 100 aa8.65□□□□□ -1.02
USF1-208ENST00000528768 RPL39LQ96EH5 51 aaKnown RBP8.65□□□□□ -1.02
USF1-208ENST00000528768 LINC00467Q9BRT7 94 aa8.65□□□□□ -1.02
USF1-208ENST00000528768 CYSLTR1Q9Y271 337 aa8.65□□□□□ -1.02
USF1-208ENST00000528768 STAB2Q8WWQ8 2551 aa8.65□□□□□ -1.03
USF1-208ENST00000528768 INSP01308 110 aa8.64□□□□□ -1.03
USF1-208ENST00000528768 ANKRD39Q53RE8 183 aa8.64□□□□□ -1.03
USF1-208ENST00000528768 PAPPA-AS1Q5QFB9 102 aa8.64□□□□□ -1.03
USF1-208ENST00000528768 C2orf66Q6UXQ4 117 aa8.64□□□□□ -1.03
USF1-208ENST00000528768 ERASQ7Z444 233 aa8.64□□□□□ -1.03
USF1-208ENST00000528768 BOD1L2Q8IYS8 172 aa8.64□□□□□ -1.03
USF1-208ENST00000528768 DUX3Q96PT4 197 aa8.64□□□□□ -1.03
USF1-208ENST00000528768 MAP6D1Q9H9H5 199 aa8.64□□□□□ -1.03
USF1-208ENST00000528768 MDFICQ9P1T7 246 aa8.64□□□□□ -1.03
USF1-208ENST00000528768 DKK2Q9UBU2 259 aa8.64□□□□□ -1.03
USF1-208ENST00000528768 A0A087WWL8 130 aa8.63□□□□□ -1.03
USF1-208ENST00000528768 A8MWV9 139 aa8.63□□□□□ -1.03
USF1-208ENST00000528768 SPRY2O43597 315 aa8.63□□□□□ -1.03
USF1-208ENST00000528768 LINC00315P59091 139 aa8.63□□□□□ -1.03
USF1-208ENST00000528768 EGFEM1PQ0D2K5 195 aa8.63□□□□□ -1.03
USF1-208ENST00000528768 GAGE1Q13065 139 aa8.63□□□□□ -1.03
USF1-208ENST00000528768 FHL3Q13643 280 aa8.63□□□□□ -1.03
USF1-208ENST00000528768 ZNF876PQ49A33 203 aa8.63□□□□□ -1.03
USF1-208ENST00000528768 STPG4Q8N801 248 aa8.63□□□□□ -1.03
USF1-208ENST00000528768 TMEM141Q96I45 108 aa8.63□□□□□ -1.03
USF1-208ENST00000528768 SPXQ9BT56 116 aa8.63□□□□□ -1.03
USF1-208ENST00000528768 CHTOPQ9Y3Y2 248 aaKnown RBP8.63□□□□□ -1.03
USF1-208ENST00000528768 EPPK1P58107 5090 aaKnown RBP8.63□□□□□ -1.03
USF1-208ENST00000528768 F8VRH5 84 aa8.62□□□□□ -1.03
USF1-208ENST00000528768 NMUP48645 174 aa8.62□□□□□ -1.03
USF1-208ENST00000528768 POLR2KP53803 58 aaKnown RBP8.62□□□□□ -1.03
USF1-208ENST00000528768 SEC11AP67812 179 aa8.62□□□□□ -1.03
USF1-208ENST00000528768 HSD52Q0P140 79 aa8.62□□□□□ -1.03
USF1-208ENST00000528768 RHOHQ15669 191 aa8.62□□□□□ -1.03
USF1-208ENST00000528768 CD300EQ496F6 205 aaPredicted RBP8.62□□□□□ -1.03
USF1-208ENST00000528768 FAM74A4Q5TZK3 123 aa8.62□□□□□ -1.03
USF1-208ENST00000528768 STHQ8IWL8 128 aa8.62□□□□□ -1.03
USF1-208ENST00000528768 ORAOV1Q8WV07 137 aa8.62□□□□□ -1.03
USF1-208ENST00000528768 ZNF256Q9Y2P7 627 aaPredicted RBP8.62□□□□□ -1.03
USF1-208ENST00000528768 TENM2Q9NT68 2774 aa8.62□□□□□ -1.03
USF1-208ENST00000528768 DNAH9Q9NYC9 4486 aa8.62□□□□□ -1.03
USF1-208ENST00000528768 RYR2Q92736 4967 aa8.61□□□□□ -1.03
USF1-208ENST00000528768 A0A1W2PRX2 142 aa8.61□□□□□ -1.03
USF1-208ENST00000528768 A6NDN8 102 aa8.61□□□□□ -1.03
USF1-208ENST00000528768 SDHAF1A6NFY7 115 aa8.61□□□□□ -1.03
USF1-208ENST00000528768 OR11H12B2RN74 326 aa8.61□□□□□ -1.03
USF1-208ENST00000528768 M0R2P5 195 aa8.61□□□□□ -1.03
USF1-208ENST00000528768 RHODO00212 210 aa8.61□□□□□ -1.03
USF1-208ENST00000528768 CD28P10747 220 aa8.61□□□□□ -1.03
USF1-208ENST00000528768 MPV17L2Q567V2 206 aa8.61□□□□□ -1.03
USF1-208ENST00000528768 BVES-AS1Q5T3Y7 98 aa8.61□□□□□ -1.03
USF1-208ENST00000528768 LINC01587Q99440 93 aa8.61□□□□□ -1.03
USF1-208ENST00000528768 CITED2Q99967 270 aaPredicted RBP8.61□□□□□ -1.03
USF1-208ENST00000528768 MRPL35Q9NZE8 188 aaKnown RBP8.61□□□□□ -1.03
USF1-208ENST00000528768 TRBV27A0A0K0K1C4 114 aa8.6□□□□□ -1.03
USF1-208ENST00000528768 ADARB2-AS1A8MUL3 147 aa8.6□□□□□ -1.03
USF1-208ENST00000528768 PF4P02776 101 aa8.6□□□□□ -1.03
USF1-208ENST00000528768 CRYGDP07320 174 aa8.6□□□□□ -1.03
USF1-208ENST00000528768 CASC10Q5T4H9 136 aa8.6□□□□□ -1.03
USF1-208ENST00000528768 ZC2HC1BQ5TFG8 222 aa8.6□□□□□ -1.03
USF1-208ENST00000528768 ZFP2Q6ZN57 461 aa8.6□□□□□ -1.03
USF1-208ENST00000528768 EDA2RQ9HAV5 297 aa8.6□□□□□ -1.03
USF1-208ENST00000528768 HIGD1BQ9P298 99 aa8.6□□□□□ -1.03
USF1-208ENST00000528768 DYNC2H1Q8NCM8 4307 aaKnown RBP8.59□□□□□ -1.03
USF1-208ENST00000528768 LCE6AA0A183 80 aa8.59□□□□□ -1.03
USF1-208ENST00000528768 I3L3M4 83 aa8.59□□□□□ -1.03
USF1-208ENST00000528768 M0QY20 66 aa8.59□□□□□ -1.03
USF1-208ENST00000528768 FGF6P10767 208 aa8.59□□□□□ -1.03
USF1-208ENST00000528768 KRTAP10-11P60412 298 aa8.59□□□□□ -1.03
USF1-208ENST00000528768 HERVK_113P61574 105 aa8.59□□□□□ -1.03
USF1-208ENST00000528768 NEXN-AS1Q8NBZ9 246 aa8.59□□□□□ -1.03
USF1-208ENST00000528768 MUC7Q8TAX7 377 aa8.59□□□□□ -1.03
USF1-208ENST00000528768 TIMM17AQ99595 171 aa8.59□□□□□ -1.03
USF1-208ENST00000528768 TMEM208Q9BTX3 173 aa8.59□□□□□ -1.03
USF1-208ENST00000528768 KRTAP17-1Q9BYP8 105 aa8.59□□□□□ -1.03
USF1-208ENST00000528768 JPT2Q9H910 190 aa8.59□□□□□ -1.03
USF1-208ENST00000528768 HHLA3Q9XRX5 114 aa8.59□□□□□ -1.03
USF1-208ENST00000528768 COX11Q9Y6N1 276 aa8.59□□□□□ -1.03
USF1-208ENST00000528768 HTN1P15515 57 aa8.58□□□□□ -1.04
USF1-208ENST00000528768 C2orf91Q6ZV80 131 aa8.58□□□□□ -1.04
USF1-208ENST00000528768 GTSCR1Q86UQ5 136 aa8.58□□□□□ -1.04
USF1-208ENST00000528768 TP53TG1Q9Y2A0 90 aa8.58□□□□□ -1.04
USF1-208ENST00000528768 TNFRSF18Q9Y5U5 241 aa8.58□□□□□ -1.04
USF1-208ENST00000528768 PMVKQ15126 192 aa8.57□□□□□ -1.04
USF1-208ENST00000528768 BAALCQ8WXS3 180 aa8.57□□□□□ -1.04
USF1-208ENST00000528768 DNAJC30Q96LL9 226 aa8.57□□□□□ -1.04
USF1-208ENST00000528768 FAM110AQ9BQ89 295 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms