RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 I3L3M4 83 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 IGHV4-59P01825 116 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 AZU1P20160 251 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 CRYBA4P53673 196 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 EMP1P54849 157 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 PIK3CD-AS1Q5SR53 167 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 TMEM170BQ5T4T1 132 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 C10orf126Q8N4M7 172 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 TRAV12-2A0A075B6T6 113 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 J3QLI3 93 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 M0QXV9 152 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 APOMO95445 188 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 ZNF22P17026 224 aaPredicted RBP4.91□□□□□ -1.62
CDH12-203ENST00000517378 FOXI1Q12951 378 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 DEFB112Q30KQ8 113 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 FAM74A4Q5TZK3 123 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 PYGO1Q9Y3Y4 419 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 FASNP49327 2511 aaKnown RBP4.91□□□□□ -1.62
CDH12-203ENST00000517378 IGLV4-3A0A075B6K6 122 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 ELANEP08246 267 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 LGALS3P17931 250 aaKnown RBP4.91□□□□□ -1.62
CDH12-203ENST00000517378 C10orf99Q6UWK7 81 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 WFDC12Q8WWY7 111 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 PTH2Q96A98 100 aa4.91□□□□□ -1.62
CDH12-203ENST00000517378 A0A0B4J2C4 111 aa4.9□□□□□ -1.62
CDH12-203ENST00000517378 RHODO00212 210 aa4.9□□□□□ -1.62
CDH12-203ENST00000517378 INSL3P51460 131 aa4.9□□□□□ -1.62
CDH12-203ENST00000517378 SPINK13Q1W4C9 94 aa4.9□□□□□ -1.62
CDH12-203ENST00000517378 MTURNQ8N3F0 131 aa4.9□□□□□ -1.62
CDH12-203ENST00000517378 LINC01356Q8N9X3 169 aa4.9□□□□□ -1.62
CDH12-203ENST00000517378 GTSF1LQ9H1H1 148 aa4.9□□□□□ -1.62
CDH12-203ENST00000517378 PRO1854Q9UHT4 67 aa4.9□□□□□ -1.62
CDH12-203ENST00000517378 TRAV2A0A0B4J234 112 aa4.9□□□□□ -1.63
CDH12-203ENST00000517378 CIDEAO60543 219 aa4.9□□□□□ -1.63
CDH12-203ENST00000517378 FSHBP01225 129 aa4.9□□□□□ -1.63
CDH12-203ENST00000517378 Q5PR19 223 aa4.9□□□□□ -1.63
CDH12-203ENST00000517378 FAM104AQ969W3 186 aa4.9□□□□□ -1.63
CDH12-203ENST00000517378 UBE2E2Q96LR5 201 aa4.9□□□□□ -1.63
CDH12-203ENST00000517378 EIF4EBP3O60516 100 aaPredicted RBP4.89□□□□□ -1.63
CDH12-203ENST00000517378 TCL1BO95988 128 aa4.89□□□□□ -1.63
CDH12-203ENST00000517378 RBMY1A1P0DJD3 496 aaKnown RBP4.89□□□□□ -1.63
CDH12-203ENST00000517378 RBMY1CP0DJD4 496 aa4.89□□□□□ -1.63
CDH12-203ENST00000517378 HOXD3P31249 432 aaPredicted RBP4.89□□□□□ -1.63
CDH12-203ENST00000517378 PSMB2P49721 201 aa4.89□□□□□ -1.63
CDH12-203ENST00000517378 SYNJ2BPP57105 145 aa4.89□□□□□ -1.63
CDH12-203ENST00000517378 RBMY1FQ15415 496 aaKnown RBP4.89□□□□□ -1.63
CDH12-203ENST00000517378 TEN1Q86WV5 123 aa4.89□□□□□ -1.63
CDH12-203ENST00000517378 VPREB3Q9UKI3 123 aa4.89□□□□□ -1.63
CDH12-203ENST00000517378 LOC107984156A0A0G2JMH3 177 aa4.89□□□□□ -1.63
CDH12-203ENST00000517378 M0R2P5 195 aa4.89□□□□□ -1.63
CDH12-203ENST00000517378 MRPS36P82909 103 aaKnown RBP4.89□□□□□ -1.63
CDH12-203ENST00000517378 ARL17AQ8IVW1 177 aa4.89□□□□□ -1.63
CDH12-203ENST00000517378 TMEM263Q8WUH6 116 aaKnown RBP4.89□□□□□ -1.63
CDH12-203ENST00000517378 LINC01600Q96MT4 127 aa4.89□□□□□ -1.63
CDH12-203ENST00000517378 OPRPNQ99935 248 aaPredicted RBP4.89□□□□□ -1.63
CDH12-203ENST00000517378 LINC00467Q9BRT7 94 aa4.89□□□□□ -1.63
CDH12-203ENST00000517378 ZNF702PQ9H963 129 aa4.89□□□□□ -1.63
CDH12-203ENST00000517378 IGKV3-20P01619 116 aa4.88□□□□□ -1.63
CDH12-203ENST00000517378 SMAGPQ0VAQ4 97 aa4.88□□□□□ -1.63
CDH12-203ENST00000517378 DEFB104AQ8WTQ1 72 aa4.88□□□□□ -1.63
CDH12-203ENST00000517378 PPDPFLQ8WWR9 84 aa4.88□□□□□ -1.63
CDH12-203ENST00000517378 CDIP1Q9H305 208 aa4.88□□□□□ -1.63
CDH12-203ENST00000517378 VCX2Q9H322 139 aa4.88□□□□□ -1.63
CDH12-203ENST00000517378 CELSR2Q9HCU4 2923 aa4.88□□□□□ -1.63
CDH12-203ENST00000517378 A4D1N5 150 aa4.88□□□□□ -1.63
CDH12-203ENST00000517378 IGHV3-33P01772 117 aa4.88□□□□□ -1.63
CDH12-203ENST00000517378 TCTEX1D4Q5JR98 221 aa4.88□□□□□ -1.63
CDH12-203ENST00000517378 Q6YL49 198 aa4.88□□□□□ -1.63
CDH12-203ENST00000517378 LITAFQ99732 161 aa4.88□□□□□ -1.63
CDH12-203ENST00000517378 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.88□□□□□ -1.63
CDH12-203ENST00000517378 GCN1Q92616 2671 aaKnown RBP4.87□□□□□ -1.63
CDH12-203ENST00000517378 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.87□□□□□ -1.63
CDH12-203ENST00000517378 A8MWV9 139 aa4.87□□□□□ -1.63
CDH12-203ENST00000517378 Q8N2B8 174 aa4.87□□□□□ -1.63
CDH12-203ENST00000517378 CARD19Q96LW7 228 aa4.87□□□□□ -1.63
CDH12-203ENST00000517378 A0A0J9YXV3 536 aa4.87□□□□□ -1.63
CDH12-203ENST00000517378 A0A0J9YXY3 114 aa4.87□□□□□ -1.63
CDH12-203ENST00000517378 FHL3Q13643 280 aa4.87□□□□□ -1.63
CDH12-203ENST00000517378 SPANXA1Q9NS26 97 aa4.87□□□□□ -1.63
CDH12-203ENST00000517378 HELZ2Q9BYK8 2649 aaKnown RBP4.87□□□□□ -1.63
CDH12-203ENST00000517378 NACAE9PAV3 2078 aa4.87□□□□□ -1.63
CDH12-203ENST00000517378 H3BMM0 161 aa4.87□□□□□ -1.63
CDH12-203ENST00000517378 IGHV3-30-3P0DP02 117 aa4.87□□□□□ -1.63
CDH12-203ENST00000517378 SPANXDQ9BXN6 97 aa4.87□□□□□ -1.63
CDH12-203ENST00000517378 SPANXCQ9NY87 97 aa4.87□□□□□ -1.63
CDH12-203ENST00000517378 TENM4Q6N022 2769 aa4.86□□□□□ -1.63
CDH12-203ENST00000517378 TINCRA0A1B0GVN0 87 aa4.86□□□□□ -1.63
CDH12-203ENST00000517378 RBMY1BA6NDE4 496 aaKnown RBP4.86□□□□□ -1.63
CDH12-203ENST00000517378 RBMY1EA6NEQ0 496 aaKnown RBP4.86□□□□□ -1.63
CDH12-203ENST00000517378 RBMY1DP0C7P1 496 aaKnown RBP4.86□□□□□ -1.63
CDH12-203ENST00000517378 CD28P10747 220 aa4.86□□□□□ -1.63
CDH12-203ENST00000517378 MUSTN1Q8IVN3 82 aa4.86□□□□□ -1.63
CDH12-203ENST00000517378 ZNF418Q8TF45 676 aaPredicted RBP4.86□□□□□ -1.63
CDH12-203ENST00000517378 RNF183Q96D59 192 aa4.86□□□□□ -1.63
CDH12-203ENST00000517378 CHCHD7Q9BUK0 85 aa4.86□□□□□ -1.63
CDH12-203ENST00000517378 TIMM21Q9BVV7 248 aa4.86□□□□□ -1.63
CDH12-203ENST00000517378 AKAP6Q13023 2319 aa4.86□□□□□ -1.63
CDH12-203ENST00000517378 FLNBO75369 2602 aaKnown RBP4.86□□□□□ -1.63
CDH12-203ENST00000517378 LRRK2Q5S007 2527 aa4.86□□□□□ -1.63
CDH12-203ENST00000517378 ZNF462Q96JM2 2506 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms