RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 D6R8Y8 96 aa6.26□□□□□ -1.41
NUDCD3-208ENST00000480209 K7EQD1 137 aa6.26□□□□□ -1.41
NUDCD3-208ENST00000480209 NPYP01303 97 aa6.26□□□□□ -1.41
NUDCD3-208ENST00000480209 APCSP02743 223 aa6.26□□□□□ -1.41
NUDCD3-208ENST00000480209 MT-ND6P03923 174 aa6.26□□□□□ -1.41
NUDCD3-208ENST00000480209 COX19Q49B96 90 aa6.26□□□□□ -1.41
NUDCD3-208ENST00000480209 FRZBQ92765 325 aa6.26□□□□□ -1.41
NUDCD3-208ENST00000480209 TRAPPC1Q9Y5R8 145 aa6.26□□□□□ -1.41
NUDCD3-208ENST00000480209 TRAV10A0A0B4J240 114 aa6.25□□□□□ -1.41
NUDCD3-208ENST00000480209 TRBV6-4A0A1B0GX49 114 aa6.25□□□□□ -1.41
NUDCD3-208ENST00000480209 TRGC2P03986 189 aa6.25□□□□□ -1.41
NUDCD3-208ENST00000480209 NEXN-AS1Q8NBZ9 246 aa6.25□□□□□ -1.41
NUDCD3-208ENST00000480209 PHLDA1Q8WV24 401 aaPredicted RBP6.25□□□□□ -1.41
NUDCD3-208ENST00000480209 MRAP2Q96G30 205 aa6.25□□□□□ -1.41
NUDCD3-208ENST00000480209 PRO0255Q9UI72 69 aa6.25□□□□□ -1.41
NUDCD3-208ENST00000480209 HHLA3Q9XRX5 114 aa6.25□□□□□ -1.41
NUDCD3-208ENST00000480209 PAX4O43316 350 aa6.24□□□□□ -1.41
NUDCD3-208ENST00000480209 CIDEAO60543 219 aa6.24□□□□□ -1.41
NUDCD3-208ENST00000480209 SRIP30626 198 aa6.24□□□□□ -1.41
NUDCD3-208ENST00000480209 CKS2P33552 79 aa6.24□□□□□ -1.41
NUDCD3-208ENST00000480209 RHOHQ15669 191 aa6.24□□□□□ -1.41
NUDCD3-208ENST00000480209 NEGR1Q7Z3B1 354 aa6.24□□□□□ -1.41
NUDCD3-208ENST00000480209 ORMDL3Q8N138 153 aa6.24□□□□□ -1.41
NUDCD3-208ENST00000480209 PRELID3AQ96N28 172 aa6.24□□□□□ -1.41
NUDCD3-208ENST00000480209 ALKBH7Q9BT30 221 aaPredicted RBP6.24□□□□□ -1.41
NUDCD3-208ENST00000480209 PLECQ15149 4684 aaKnown RBP6.24□□□□□ -1.41
NUDCD3-208ENST00000480209 ALMS1Q8TCU4 4167 aa6.24□□□□□ -1.41
NUDCD3-208ENST00000480209 TRBV6-5A0A0K0K1A5 114 aa6.23□□□□□ -1.41
NUDCD3-208ENST00000480209 GAGE12JA6NER3 117 aa6.23□□□□□ -1.41
NUDCD3-208ENST00000480209 TNFRSF6BO95407 300 aa6.23□□□□□ -1.41
NUDCD3-208ENST00000480209 GYPEP15421 78 aa6.23□□□□□ -1.41
NUDCD3-208ENST00000480209 GAGE1Q13065 139 aa6.23□□□□□ -1.41
NUDCD3-208ENST00000480209 GAGE4Q13068 117 aa6.23□□□□□ -1.41
NUDCD3-208ENST00000480209 GAGE5Q13069 117 aa6.23□□□□□ -1.41
NUDCD3-208ENST00000480209 IQCJQ1A5X6 159 aa6.23□□□□□ -1.41
NUDCD3-208ENST00000480209 GAGE13Q4V321 117 aa6.23□□□□□ -1.41
NUDCD3-208ENST00000480209 OR10J3Q5JRS4 329 aa6.23□□□□□ -1.41
NUDCD3-208ENST00000480209 DEFB104AQ8WTQ1 72 aa6.23□□□□□ -1.41
NUDCD3-208ENST00000480209 LYSTQ99698 3801 aa6.23□□□□□ -1.41
NUDCD3-208ENST00000480209 A0A096LPF7 62 aa6.22□□□□□ -1.41
NUDCD3-208ENST00000480209 IGHV3-38A0A0C4DH36 116 aa6.22□□□□□ -1.41
NUDCD3-208ENST00000480209 TRBV10-1A0A0K0K1A3 114 aa6.22□□□□□ -1.41
NUDCD3-208ENST00000480209 H7C1H1 209 aa6.22□□□□□ -1.41
NUDCD3-208ENST00000480209 UBE2D3P61077 147 aa6.22□□□□□ -1.41
NUDCD3-208ENST00000480209 UBE2D2P62837 147 aa6.22□□□□□ -1.41
NUDCD3-208ENST00000480209 ZFAND6Q6FIF0 208 aa6.22□□□□□ -1.41
NUDCD3-208ENST00000480209 ZNRF2Q8NHG8 242 aa6.22□□□□□ -1.41
NUDCD3-208ENST00000480209 C18orf32Q8TCD1 76 aa6.22□□□□□ -1.41
NUDCD3-208ENST00000480209 URB1-AS1Q96HZ7 61 aa6.22□□□□□ -1.41
NUDCD3-208ENST00000480209 PRADC1Q9BSG0 188 aa6.22□□□□□ -1.41
NUDCD3-208ENST00000480209 NIT2Q9NQR4 276 aa6.22□□□□□ -1.41
NUDCD3-208ENST00000480209 DNAH1Q9P2D7 4330 aa6.21□□□□□ -1.41
NUDCD3-208ENST00000480209 IGLV2-18A0A075B6J9 118 aa6.21□□□□□ -1.42
NUDCD3-208ENST00000480209 TRBV7-3A0A075B6L6 115 aa6.21□□□□□ -1.42
NUDCD3-208ENST00000480209 SDHAF1A6NFY7 115 aa6.21□□□□□ -1.42
NUDCD3-208ENST00000480209 IGLL5B9A064 214 aa6.21□□□□□ -1.42
NUDCD3-208ENST00000480209 PPBPP02775 128 aa6.21□□□□□ -1.42
NUDCD3-208ENST00000480209 POLR2KP53803 58 aaKnown RBP6.21□□□□□ -1.42
NUDCD3-208ENST00000480209 SUMO2P61956 95 aaKnown RBP6.21□□□□□ -1.42
NUDCD3-208ENST00000480209 CEMP1Q6PRD7 247 aaPredicted RBP6.21□□□□□ -1.42
NUDCD3-208ENST00000480209 MUC7Q8TAX7 377 aa6.21□□□□□ -1.42
NUDCD3-208ENST00000480209 WWC2-AS2Q96NR7 200 aa6.21□□□□□ -1.42
NUDCD3-208ENST00000480209 TMEM70Q9BUB7 260 aa6.21□□□□□ -1.42
NUDCD3-208ENST00000480209 SMIM2Q9BVW6 85 aa6.21□□□□□ -1.42
NUDCD3-208ENST00000480209 ICOSQ9Y6W8 199 aa6.21□□□□□ -1.42
NUDCD3-208ENST00000480209 VPS13DQ5THJ4 4388 aa6.21□□□□□ -1.42
NUDCD3-208ENST00000480209 LOC389332A0A1B0GUA5 103 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 H3BNG1 76 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 HIST1H2BKO60814 126 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 NUDT3O95989 172 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 HIST1H2BJP06899 126 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 HIST1H2BOP23527 126 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 HIST1H2BBP33778 126 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 HIST1H2BDP58876 126 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 LINC00310P59036 64 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 HIST1H2BCP62807 126 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 RPL36AP83881 106 aaKnown RBP6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 HIST2H2BEQ16778 126 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 HIST1H2BHQ93079 126 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 RPL36ALQ969Q0 106 aaKnown RBP6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 DNAJC30Q96LL9 226 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 HIST1H2BNQ99877 126 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 HIST1H2BMQ99879 126 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 MAP1LC3AQ9H492 121 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 ST20Q9HBF5 79 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 LAMTOR2Q9Y2Q5 125 aa6.2□□□□□ -1.42
NUDCD3-208ENST00000480209 NUPR2A6NF83 97 aa6.19□□□□□ -1.42
NUDCD3-208ENST00000480209 TSHBP01222 138 aa6.19□□□□□ -1.42
NUDCD3-208ENST00000480209 IFI27P40305 119 aaPredicted RBP6.19□□□□□ -1.42
NUDCD3-208ENST00000480209 NTM-AS1Q6ZSK4 140 aa6.19□□□□□ -1.42
NUDCD3-208ENST00000480209 C20orf78Q9BR46 151 aa6.19□□□□□ -1.42
NUDCD3-208ENST00000480209 APLNQ9ULZ1 77 aa6.19□□□□□ -1.42
NUDCD3-208ENST00000480209 TNFRSF18Q9Y5U5 241 aa6.19□□□□□ -1.42
NUDCD3-208ENST00000480209 DNAH6Q9C0G6 4158 aa6.18□□□□□ -1.42
NUDCD3-208ENST00000480209 TRBV27A0A0K0K1C4 114 aa6.18□□□□□ -1.42
NUDCD3-208ENST00000480209 PRSS47A8MTI9 375 aa6.18□□□□□ -1.42
NUDCD3-208ENST00000480209 TCAPO15273 167 aa6.18□□□□□ -1.42
NUDCD3-208ENST00000480209 EIF4EBP3O60516 100 aaPredicted RBP6.18□□□□□ -1.42
NUDCD3-208ENST00000480209 RPL32P62910 135 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms