RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 H3BNG1 76 aa10.02□□□□□ -0.81
COL6A1-202ENST00000463060 H7C1H1 209 aa10.02□□□□□ -0.81
COL6A1-202ENST00000463060 LINC00694P0DN24 101 aa10.02□□□□□ -0.81
COL6A1-202ENST00000463060 RHOHQ15669 191 aa10.02□□□□□ -0.81
COL6A1-202ENST00000463060 PHLDA1Q8WV24 401 aaPredicted RBP10.02□□□□□ -0.81
COL6A1-202ENST00000463060 RPL39LQ96EH5 51 aaKnown RBP10.02□□□□□ -0.81
COL6A1-202ENST00000463060 PRELID3AQ96N28 172 aa10.02□□□□□ -0.81
COL6A1-202ENST00000463060 TRAV26-1A0A087WT03 109 aa10.01□□□□□ -0.81
COL6A1-202ENST00000463060 LOC100131303A0A0U1RQF7 123 aa10.01□□□□□ -0.81
COL6A1-202ENST00000463060 PAX4O43316 350 aa10.01□□□□□ -0.81
COL6A1-202ENST00000463060 TNFRSF6BO95407 300 aa10.01□□□□□ -0.81
COL6A1-202ENST00000463060 NPYP01303 97 aa10.01□□□□□ -0.81
COL6A1-202ENST00000463060 DNAJC30Q96LL9 226 aa10.01□□□□□ -0.81
COL6A1-202ENST00000463060 LAMTOR2Q9Y2Q5 125 aa10.01□□□□□ -0.81
COL6A1-202ENST00000463060 PPP1R17O96001 155 aa10□□□□□ -0.81
COL6A1-202ENST00000463060 POLR2KP53803 58 aaKnown RBP10□□□□□ -0.81
COL6A1-202ENST00000463060 SREK1IP1Q8N9Q2 155 aaPredicted RBP10□□□□□ -0.81
COL6A1-202ENST00000463060 C20orf78Q9BR46 151 aa10□□□□□ -0.81
COL6A1-202ENST00000463060 PRADC1Q9BSG0 188 aa10□□□□□ -0.81
COL6A1-202ENST00000463060 TRBV7-3A0A075B6L6 115 aa9.99□□□□□ -0.81
COL6A1-202ENST00000463060 A0A0J9YY99 117 aa9.99□□□□□ -0.81
COL6A1-202ENST00000463060 SRIP30626 198 aa9.99□□□□□ -0.81
COL6A1-202ENST00000463060 RPL32P62910 135 aaKnown RBP9.99□□□□□ -0.81
COL6A1-202ENST00000463060 IGLV2-18A0A075B6J9 118 aa9.98□□□□□ -0.81
COL6A1-202ENST00000463060 GYPEP15421 78 aa9.98□□□□□ -0.81
COL6A1-202ENST00000463060 UBE2D3P61077 147 aa9.98□□□□□ -0.81
COL6A1-202ENST00000463060 UBE2D2P62837 147 aa9.98□□□□□ -0.81
COL6A1-202ENST00000463060 OR10J3Q5JRS4 329 aa9.98□□□□□ -0.81
COL6A1-202ENST00000463060 ZNRF2Q8NHG8 242 aa9.98□□□□□ -0.81
COL6A1-202ENST00000463060 TMEM70Q9BUB7 260 aa9.98□□□□□ -0.81
COL6A1-202ENST00000463060 A0A096LPF7 62 aa9.97□□□□□ -0.81
COL6A1-202ENST00000463060 TRBV27A0A0K0K1C4 114 aa9.97□□□□□ -0.81
COL6A1-202ENST00000463060 SUMO2P61956 95 aaKnown RBP9.97□□□□□ -0.81
COL6A1-202ENST00000463060 RPL36AP83881 106 aaKnown RBP9.97□□□□□ -0.81
COL6A1-202ENST00000463060 CEMP1Q6PRD7 247 aaPredicted RBP9.97□□□□□ -0.81
COL6A1-202ENST00000463060 C18orf32Q8TCD1 76 aa9.97□□□□□ -0.81
COL6A1-202ENST00000463060 RPL36ALQ969Q0 106 aaKnown RBP9.97□□□□□ -0.81
COL6A1-202ENST00000463060 ST20Q9HBF5 79 aa9.97□□□□□ -0.81
COL6A1-202ENST00000463060 TNFRSF18Q9Y5U5 241 aa9.97□□□□□ -0.81
COL6A1-202ENST00000463060 CSMD3Q7Z407 3707 aa9.96□□□□□ -0.81
COL6A1-202ENST00000463060 GAGE12JA6NER3 117 aa9.96□□□□□ -0.82
COL6A1-202ENST00000463060 SDHAF1A6NFY7 115 aa9.96□□□□□ -0.82
COL6A1-202ENST00000463060 GAGE1Q13065 139 aa9.96□□□□□ -0.82
COL6A1-202ENST00000463060 GAGE4Q13068 117 aa9.96□□□□□ -0.82
COL6A1-202ENST00000463060 GAGE5Q13069 117 aa9.96□□□□□ -0.82
COL6A1-202ENST00000463060 GAGE13Q4V321 117 aa9.96□□□□□ -0.82
COL6A1-202ENST00000463060 HIST1H2BKO60814 126 aa9.95□□□□□ -0.82
COL6A1-202ENST00000463060 HIST1H2BJP06899 126 aa9.95□□□□□ -0.82
COL6A1-202ENST00000463060 HIST1H2BOP23527 126 aa9.95□□□□□ -0.82
COL6A1-202ENST00000463060 HIST1H2BBP33778 126 aa9.95□□□□□ -0.82
COL6A1-202ENST00000463060 HIST1H2BDP58876 126 aa9.95□□□□□ -0.82
COL6A1-202ENST00000463060 HIST1H2BCP62807 126 aa9.95□□□□□ -0.82
COL6A1-202ENST00000463060 Q0VG73 95 aa9.95□□□□□ -0.82
COL6A1-202ENST00000463060 MRPL23Q16540 153 aaKnown RBP9.95□□□□□ -0.82
COL6A1-202ENST00000463060 HIST2H2BEQ16778 126 aa9.95□□□□□ -0.82
COL6A1-202ENST00000463060 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.95□□□□□ -0.82
COL6A1-202ENST00000463060 HIST1H2BHQ93079 126 aa9.95□□□□□ -0.82
COL6A1-202ENST00000463060 WWC2-AS2Q96NR7 200 aa9.95□□□□□ -0.82
COL6A1-202ENST00000463060 HIST1H2BNQ99877 126 aa9.95□□□□□ -0.82
COL6A1-202ENST00000463060 HIST1H2BMQ99879 126 aa9.95□□□□□ -0.82
COL6A1-202ENST00000463060 C1orf196B1AJZ1 125 aa9.94□□□□□ -0.82
COL6A1-202ENST00000463060 VCYO14598 125 aa9.94□□□□□ -0.82
COL6A1-202ENST00000463060 IQCJQ1A5X6 159 aa9.94□□□□□ -0.82
COL6A1-202ENST00000463060 URB1-AS1Q96HZ7 61 aa9.94□□□□□ -0.82
COL6A1-202ENST00000463060 SMIM2Q9BVW6 85 aa9.94□□□□□ -0.82
COL6A1-202ENST00000463060 MAP1LC3AQ9H492 121 aa9.94□□□□□ -0.82
COL6A1-202ENST00000463060 ICOSQ9Y6W8 199 aa9.94□□□□□ -0.82
COL6A1-202ENST00000463060 LINC01546A6NGU7 62 aa9.93□□□□□ -0.82
COL6A1-202ENST00000463060 SH2D6Q7Z4S9 175 aa9.93□□□□□ -0.82
COL6A1-202ENST00000463060 DAZ4Q86SG3 579 aaKnown RBP9.93□□□□□ -0.82
COL6A1-202ENST00000463060 Q8N8P6 123 aa9.93□□□□□ -0.82
COL6A1-202ENST00000463060 C15orf53Q8NAA6 179 aa9.93□□□□□ -0.82
COL6A1-202ENST00000463060 ATP6V0E2Q8NHE4 81 aa9.93□□□□□ -0.82
COL6A1-202ENST00000463060 MUC7Q8TAX7 377 aa9.93□□□□□ -0.82
COL6A1-202ENST00000463060 DAZ3Q9NR90 486 aaKnown RBP9.93□□□□□ -0.82
COL6A1-202ENST00000463060 LOC389332A0A1B0GUA5 103 aa9.92□□□□□ -0.82
COL6A1-202ENST00000463060 NUPR2A6NF83 97 aa9.92□□□□□ -0.82
COL6A1-202ENST00000463060 IGLL5B9A064 214 aa9.92□□□□□ -0.82
COL6A1-202ENST00000463060 TSHBP01222 138 aa9.92□□□□□ -0.82
COL6A1-202ENST00000463060 IFI27P40305 119 aaPredicted RBP9.92□□□□□ -0.82
COL6A1-202ENST00000463060 NTM-AS1Q6ZSK4 140 aa9.92□□□□□ -0.82
COL6A1-202ENST00000463060 NEGR1Q7Z3B1 354 aa9.92□□□□□ -0.82
COL6A1-202ENST00000463060 NXT2Q9NPJ8 142 aaKnown RBP9.92□□□□□ -0.82
COL6A1-202ENST00000463060 APLNQ9ULZ1 77 aa9.92□□□□□ -0.82
COL6A1-202ENST00000463060 STARD9Q9P2P6 4700 aa9.91□□□□□ -0.82
COL6A1-202ENST00000463060 KMT2CQ8NEZ4 4911 aaKnown RBP9.91□□□□□ -0.82
COL6A1-202ENST00000463060 IGHV3-38A0A0C4DH36 116 aa9.91□□□□□ -0.82
COL6A1-202ENST00000463060 I3L3M4 83 aa9.91□□□□□ -0.82
COL6A1-202ENST00000463060 PMCHP20382 165 aa9.91□□□□□ -0.82
COL6A1-202ENST00000463060 TIRAPP58753 221 aa9.91□□□□□ -0.82
COL6A1-202ENST00000463060 LINC00310P59036 64 aa9.91□□□□□ -0.82
COL6A1-202ENST00000463060 NIT1Q86X76 327 aa9.91□□□□□ -0.82
COL6A1-202ENST00000463060 NUDT3O95989 172 aa9.9□□□□□ -0.82
COL6A1-202ENST00000463060 COA6Q5JTJ3 125 aaKnown RBP9.9□□□□□ -0.82
COL6A1-202ENST00000463060 LYPD5Q6UWN5 251 aa9.9□□□□□ -0.82
COL6A1-202ENST00000463060 PRSS3P2Q8NHM4 247 aa9.9□□□□□ -0.82
COL6A1-202ENST00000463060 GTSF1LQ9H1H1 148 aa9.9□□□□□ -0.82
COL6A1-202ENST00000463060 K7EMI3 77 aa9.89□□□□□ -0.83
COL6A1-202ENST00000463060 LINC00614P0C842 121 aa9.89□□□□□ -0.83
COL6A1-202ENST00000463060 TCTAP57738 103 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms