RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 NRACQ8N912 160 aa11.59□□□□□ -0.55
CCDC90B-202ENST00000455220 NEXN-AS1Q8NBZ9 246 aa11.59□□□□□ -0.55
CCDC90B-202ENST00000455220 WWC2-AS2Q96NR7 200 aa11.59□□□□□ -0.55
CCDC90B-202ENST00000455220 A0A0J9YY99 117 aa11.58□□□□□ -0.55
CCDC90B-202ENST00000455220 LINC00694P0DN24 101 aa11.58□□□□□ -0.55
CCDC90B-202ENST00000455220 KIAA1644Q3SXP7 199 aa11.58□□□□□ -0.55
CCDC90B-202ENST00000455220 RPL39LQ96EH5 51 aaKnown RBP11.58□□□□□ -0.55
CCDC90B-202ENST00000455220 NIT2Q9NQR4 276 aa11.58□□□□□ -0.55
CCDC90B-202ENST00000455220 TRBV6-5A0A0K0K1A5 114 aa11.58□□□□□ -0.56
CCDC90B-202ENST00000455220 LOC100131303A0A0U1RQF7 123 aa11.58□□□□□ -0.56
CCDC90B-202ENST00000455220 PPP1R17O96001 155 aa11.58□□□□□ -0.56
CCDC90B-202ENST00000455220 GYPEP15421 78 aa11.58□□□□□ -0.56
CCDC90B-202ENST00000455220 CEMP1Q6PRD7 247 aaPredicted RBP11.58□□□□□ -0.56
CCDC90B-202ENST00000455220 DNAJC30Q96LL9 226 aa11.58□□□□□ -0.56
CCDC90B-202ENST00000455220 LAMTOR2Q9Y2Q5 125 aa11.58□□□□□ -0.56
CCDC90B-202ENST00000455220 PHOX2AO14813 284 aa11.57□□□□□ -0.56
CCDC90B-202ENST00000455220 OR10J3Q5JRS4 329 aa11.57□□□□□ -0.56
CCDC90B-202ENST00000455220 PRELID3AQ96N28 172 aa11.57□□□□□ -0.56
CCDC90B-202ENST00000455220 TRBV7-3A0A075B6L6 115 aa11.56□□□□□ -0.56
CCDC90B-202ENST00000455220 NUPR2A6NF83 97 aa11.56□□□□□ -0.56
CCDC90B-202ENST00000455220 TRGC2P03986 189 aa11.56□□□□□ -0.56
CCDC90B-202ENST00000455220 RPL36AP83881 106 aaKnown RBP11.56□□□□□ -0.56
CCDC90B-202ENST00000455220 RPL36ALQ969Q0 106 aaKnown RBP11.56□□□□□ -0.56
CCDC90B-202ENST00000455220 ALKBH7Q9BT30 221 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-202ENST00000455220 GAGE12JA6NER3 117 aa11.55□□□□□ -0.56
CCDC90B-202ENST00000455220 TNFRSF6BO95407 300 aa11.55□□□□□ -0.56
CCDC90B-202ENST00000455220 NPYP01303 97 aa11.55□□□□□ -0.56
CCDC90B-202ENST00000455220 GAGE1Q13065 139 aa11.55□□□□□ -0.56
CCDC90B-202ENST00000455220 GAGE4Q13068 117 aa11.55□□□□□ -0.56
CCDC90B-202ENST00000455220 GAGE5Q13069 117 aa11.55□□□□□ -0.56
CCDC90B-202ENST00000455220 GAGE13Q4V321 117 aa11.55□□□□□ -0.56
CCDC90B-202ENST00000455220 ZNRF2Q8NHG8 242 aa11.55□□□□□ -0.56
CCDC90B-202ENST00000455220 MUC7Q8TAX7 377 aa11.55□□□□□ -0.56
CCDC90B-202ENST00000455220 TNFRSF18Q9Y5U5 241 aa11.55□□□□□ -0.56
CCDC90B-202ENST00000455220 UBE2D3P61077 147 aa11.54□□□□□ -0.56
CCDC90B-202ENST00000455220 UBE2D2P62837 147 aa11.54□□□□□ -0.56
CCDC90B-202ENST00000455220 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.54□□□□□ -0.56
CCDC90B-202ENST00000455220 C20orf78Q9BR46 151 aa11.54□□□□□ -0.56
CCDC90B-202ENST00000455220 ICOSQ9Y6W8 199 aa11.54□□□□□ -0.56
CCDC90B-202ENST00000455220 A0A096LPF7 62 aa11.54□□□□□ -0.56
CCDC90B-202ENST00000455220 SRIP30626 198 aa11.54□□□□□ -0.56
CCDC90B-202ENST00000455220 SUMO2P61956 95 aaKnown RBP11.54□□□□□ -0.56
CCDC90B-202ENST00000455220 MRPL23Q16540 153 aaKnown RBP11.54□□□□□ -0.56
CCDC90B-202ENST00000455220 C15orf53Q8NAA6 179 aa11.54□□□□□ -0.56
CCDC90B-202ENST00000455220 ST20Q9HBF5 79 aa11.54□□□□□ -0.56
CCDC90B-202ENST00000455220 PRSS47A8MTI9 375 aa11.53□□□□□ -0.56
CCDC90B-202ENST00000455220 IGLL5B9A064 214 aa11.53□□□□□ -0.56
CCDC90B-202ENST00000455220 POLR2KP53803 58 aaKnown RBP11.53□□□□□ -0.56
CCDC90B-202ENST00000455220 RPL32P62910 135 aaKnown RBP11.53□□□□□ -0.56
CCDC90B-202ENST00000455220 SDHAF1A6NFY7 115 aa11.52□□□□□ -0.57
CCDC90B-202ENST00000455220 SH2D6Q7Z4S9 175 aa11.52□□□□□ -0.57
CCDC90B-202ENST00000455220 TMEM70Q9BUB7 260 aa11.52□□□□□ -0.57
CCDC90B-202ENST00000455220 KLK5Q9Y337 293 aaPredicted RBP11.52□□□□□ -0.57
CCDC90B-202ENST00000455220 DAZ4Q86SG3 579 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-202ENST00000455220 DAZ3Q9NR90 486 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-202ENST00000455220 TRBV27A0A0K0K1C4 114 aa11.5□□□□□ -0.57
CCDC90B-202ENST00000455220 NUDT3O95989 172 aa11.5□□□□□ -0.57
CCDC90B-202ENST00000455220 ATP6V0E2Q8NHE4 81 aa11.5□□□□□ -0.57
CCDC90B-202ENST00000455220 MAP1LC3AQ9H492 121 aa11.5□□□□□ -0.57
CCDC90B-202ENST00000455220 TCTAP57738 103 aa11.5□□□□□ -0.57
CCDC90B-202ENST00000455220 ZFAND6Q6FIF0 208 aa11.5□□□□□ -0.57
CCDC90B-202ENST00000455220 NEGR1Q7Z3B1 354 aa11.5□□□□□ -0.57
CCDC90B-202ENST00000455220 SMIM2Q9BVW6 85 aa11.5□□□□□ -0.57
CCDC90B-202ENST00000455220 C18orf32Q8TCD1 76 aa11.49□□□□□ -0.57
CCDC90B-202ENST00000455220 APLNQ9ULZ1 77 aa11.49□□□□□ -0.57
CCDC90B-202ENST00000455220 IGLV2-18A0A075B6J9 118 aa11.48□□□□□ -0.57
CCDC90B-202ENST00000455220 VCYO14598 125 aa11.48□□□□□ -0.57
CCDC90B-202ENST00000455220 IGHV3-38A0A0C4DH36 116 aa11.47□□□□□ -0.57
CCDC90B-202ENST00000455220 I3L3M4 83 aa11.47□□□□□ -0.57
CCDC90B-202ENST00000455220 TIRAPP58753 221 aa11.47□□□□□ -0.57
CCDC90B-202ENST00000455220 GTSF1LQ9H1H1 148 aa11.47□□□□□ -0.57
CCDC90B-202ENST00000455220 LOC389332A0A1B0GUA5 103 aa11.46□□□□□ -0.57
CCDC90B-202ENST00000455220 C3orf84H3BNL1 204 aa11.46□□□□□ -0.57
CCDC90B-202ENST00000455220 Q8N8P6 123 aa11.46□□□□□ -0.57
CCDC90B-202ENST00000455220 NXT2Q9NPJ8 142 aaKnown RBP11.46□□□□□ -0.57
CCDC90B-202ENST00000455220 C1orf196B1AJZ1 125 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 HIST1H2BKO60814 126 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 HIST1H2BJP06899 126 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 PMCHP20382 165 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 HIST1H2BOP23527 126 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 HIST1H2BBP33778 126 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 HIST1H2BDP58876 126 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 HIST1H2BCP62807 126 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 HIST2H2BEQ16778 126 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 IQCJQ1A5X6 159 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 LYPD5Q6UWN5 251 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 HIST1H2BHQ93079 126 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 HIST1H2BNQ99877 126 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 HIST1H2BMQ99879 126 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 LYSTQ99698 3801 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 TSHBP01222 138 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 IFI27P40305 119 aaPredicted RBP11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 Q0VG73 95 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 COTL1Q14019 142 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 TMEM97Q5BJF2 176 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 KIR2DL4Q99706 377 aa11.45□□□□□ -0.58
CCDC90B-202ENST00000455220 TENM2Q9NT68 2774 aa11.44□□□□□ -0.58
CCDC90B-202ENST00000455220 LINC01546A6NGU7 62 aa11.44□□□□□ -0.58
CCDC90B-202ENST00000455220 ESRGQ1W209 222 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms