RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 MRPL18Q9H0U6 180 aaKnown RBP7.86□□□□□ -1.15
TRAF4-206ENST00000454852 TRAPPC1Q9Y5R8 145 aa7.86□□□□□ -1.15
TRAF4-206ENST00000454852 TRBV7-3A0A075B6L6 115 aa7.85□□□□□ -1.15
TRAF4-206ENST00000454852 TRAV26-2A0A0B4J265 109 aa7.85□□□□□ -1.15
TRAF4-206ENST00000454852 D6R8Y8 96 aa7.85□□□□□ -1.15
TRAF4-206ENST00000454852 HTN3P15516 51 aa7.85□□□□□ -1.15
TRAF4-206ENST00000454852 CKS2P33552 79 aa7.85□□□□□ -1.15
TRAF4-206ENST00000454852 TCTAP57738 103 aa7.85□□□□□ -1.15
TRAF4-206ENST00000454852 RPL32P62910 135 aaKnown RBP7.85□□□□□ -1.15
TRAF4-206ENST00000454852 C15orf53Q8NAA6 179 aa7.85□□□□□ -1.15
TRAF4-206ENST00000454852 NEXN-AS1Q8NBZ9 246 aa7.85□□□□□ -1.15
TRAF4-206ENST00000454852 C20orf78Q9BR46 151 aa7.85□□□□□ -1.15
TRAF4-206ENST00000454852 PLECQ15149 4684 aaKnown RBP7.85□□□□□ -1.15
TRAF4-206ENST00000454852 TGP01266 2768 aa7.85□□□□□ -1.15
TRAF4-206ENST00000454852 STARD9Q9P2P6 4700 aa7.85□□□□□ -1.15
TRAF4-206ENST00000454852 GAS8-AS1O95177 125 aa7.84□□□□□ -1.15
TRAF4-206ENST00000454852 RPL36AP83881 106 aaKnown RBP7.84□□□□□ -1.15
TRAF4-206ENST00000454852 MRPL23Q16540 153 aaKnown RBP7.84□□□□□ -1.15
TRAF4-206ENST00000454852 SH2D6Q7Z4S9 175 aa7.84□□□□□ -1.15
TRAF4-206ENST00000454852 MUC7Q8TAX7 377 aa7.84□□□□□ -1.15
TRAF4-206ENST00000454852 RPL36ALQ969Q0 106 aaKnown RBP7.84□□□□□ -1.15
TRAF4-206ENST00000454852 Q9UF83 564 aa7.84□□□□□ -1.15
TRAF4-206ENST00000454852 CSMD3Q7Z407 3707 aa7.84□□□□□ -1.15
TRAF4-206ENST00000454852 TNFRSF6BO95407 300 aa7.83□□□□□ -1.16
TRAF4-206ENST00000454852 P0DMU3 169 aa7.83□□□□□ -1.16
TRAF4-206ENST00000454852 FAM231AP0DMU4 169 aa7.83□□□□□ -1.16
TRAF4-206ENST00000454852 FAM231CP0DMU5 169 aa7.83□□□□□ -1.16
TRAF4-206ENST00000454852 GYPEP15421 78 aa7.83□□□□□ -1.16
TRAF4-206ENST00000454852 POLR2KP53803 58 aaKnown RBP7.83□□□□□ -1.16
TRAF4-206ENST00000454852 UBE2D3P61077 147 aa7.83□□□□□ -1.16
TRAF4-206ENST00000454852 UBE2D2P62837 147 aa7.83□□□□□ -1.16
TRAF4-206ENST00000454852 FABP9Q0Z7S8 132 aa7.83□□□□□ -1.16
TRAF4-206ENST00000454852 OR10J3Q5JRS4 329 aa7.83□□□□□ -1.16
TRAF4-206ENST00000454852 RPL39LQ96EH5 51 aaKnown RBP7.83□□□□□ -1.16
TRAF4-206ENST00000454852 PRELID3AQ96N28 172 aa7.83□□□□□ -1.16
TRAF4-206ENST00000454852 ALKBH7Q9BT30 221 aaPredicted RBP7.83□□□□□ -1.16
TRAF4-206ENST00000454852 KLK5Q9Y337 293 aaPredicted RBP7.83□□□□□ -1.16
TRAF4-206ENST00000454852 A0A096LPF7 62 aa7.82□□□□□ -1.16
TRAF4-206ENST00000454852 A0A0J9YY99 117 aa7.82□□□□□ -1.16
TRAF4-206ENST00000454852 TRBV27A0A0K0K1C4 114 aa7.82□□□□□ -1.16
TRAF4-206ENST00000454852 LOC100131303A0A0U1RQF7 123 aa7.82□□□□□ -1.16
TRAF4-206ENST00000454852 SMKR1H3BMG3 65 aa7.82□□□□□ -1.16
TRAF4-206ENST00000454852 NCR2O95944 276 aa7.82□□□□□ -1.16
TRAF4-206ENST00000454852 NPYP01303 97 aa7.82□□□□□ -1.16
TRAF4-206ENST00000454852 TRGC2P03986 189 aa7.82□□□□□ -1.16
TRAF4-206ENST00000454852 TIRAPP58753 221 aa7.82□□□□□ -1.16
TRAF4-206ENST00000454852 SUMO2P61956 95 aaKnown RBP7.82□□□□□ -1.16
TRAF4-206ENST00000454852 DAZ4Q86SG3 579 aaKnown RBP7.82□□□□□ -1.16
TRAF4-206ENST00000454852 ST20Q9HBF5 79 aa7.82□□□□□ -1.16
TRAF4-206ENST00000454852 DAZ3Q9NR90 486 aaKnown RBP7.82□□□□□ -1.16
TRAF4-206ENST00000454852 TNFRSF18Q9Y5U5 241 aa7.82□□□□□ -1.16
TRAF4-206ENST00000454852 ICOSQ9Y6W8 199 aa7.82□□□□□ -1.16
TRAF4-206ENST00000454852 SDHAF1A6NFY7 115 aa7.81□□□□□ -1.16
TRAF4-206ENST00000454852 C3orf84H3BNL1 204 aa7.81□□□□□ -1.16
TRAF4-206ENST00000454852 SRIP30626 198 aa7.81□□□□□ -1.16
TRAF4-206ENST00000454852 KIAA1644Q3SXP7 199 aa7.81□□□□□ -1.16
TRAF4-206ENST00000454852 ZNRF2Q8NHG8 242 aa7.81□□□□□ -1.16
TRAF4-206ENST00000454852 TMEM70Q9BUB7 260 aa7.81□□□□□ -1.16
TRAF4-206ENST00000454852 APLNQ9ULZ1 77 aa7.81□□□□□ -1.16
TRAF4-206ENST00000454852 GAGE12JA6NER3 117 aa7.8□□□□□ -1.16
TRAF4-206ENST00000454852 VCYO14598 125 aa7.8□□□□□ -1.16
TRAF4-206ENST00000454852 S100A6P06703 90 aa7.8□□□□□ -1.16
TRAF4-206ENST00000454852 GAGE1Q13065 139 aa7.8□□□□□ -1.16
TRAF4-206ENST00000454852 GAGE4Q13068 117 aa7.8□□□□□ -1.16
TRAF4-206ENST00000454852 GAGE5Q13069 117 aa7.8□□□□□ -1.16
TRAF4-206ENST00000454852 GAGE13Q4V321 117 aa7.8□□□□□ -1.16
TRAF4-206ENST00000454852 TMEM97Q5BJF2 176 aa7.8□□□□□ -1.16
TRAF4-206ENST00000454852 NEGR1Q7Z3B1 354 aa7.8□□□□□ -1.16
TRAF4-206ENST00000454852 IGLV2-18A0A075B6J9 118 aa7.79□□□□□ -1.16
TRAF4-206ENST00000454852 IGLL5B9A064 214 aa7.79□□□□□ -1.16
TRAF4-206ENST00000454852 K7EMI3 77 aa7.79□□□□□ -1.16
TRAF4-206ENST00000454852 ATP6V0E2Q8NHE4 81 aa7.79□□□□□ -1.16
TRAF4-206ENST00000454852 SMIM2Q9BVW6 85 aa7.79□□□□□ -1.16
TRAF4-206ENST00000454852 GTSF1LQ9H1H1 148 aa7.79□□□□□ -1.16
TRAF4-206ENST00000454852 MAP1LC3AQ9H492 121 aa7.79□□□□□ -1.16
TRAF4-206ENST00000454852 LINC01546A6NGU7 62 aa7.78□□□□□ -1.16
TRAF4-206ENST00000454852 C5orf52A6NGY3 159 aa7.78□□□□□ -1.16
TRAF4-206ENST00000454852 I3L3M4 83 aa7.78□□□□□ -1.16
TRAF4-206ENST00000454852 TCAPO15273 167 aa7.78□□□□□ -1.16
TRAF4-206ENST00000454852 HIST1H2BKO60814 126 aa7.78□□□□□ -1.16
TRAF4-206ENST00000454852 HIST1H2BJP06899 126 aa7.78□□□□□ -1.16
TRAF4-206ENST00000454852 HIST1H2BOP23527 126 aa7.78□□□□□ -1.16
TRAF4-206ENST00000454852 HIST1H2BBP33778 126 aa7.78□□□□□ -1.16
TRAF4-206ENST00000454852 HIST1H2BDP58876 126 aa7.78□□□□□ -1.16
TRAF4-206ENST00000454852 SNRPEP62304 92 aaKnown RBP7.78□□□□□ -1.16
TRAF4-206ENST00000454852 HIST1H2BCP62807 126 aa7.78□□□□□ -1.16
TRAF4-206ENST00000454852 Q0VG73 95 aa7.78□□□□□ -1.16
TRAF4-206ENST00000454852 HIST2H2BEQ16778 126 aa7.78□□□□□ -1.16
TRAF4-206ENST00000454852 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.78□□□□□ -1.16
TRAF4-206ENST00000454852 C18orf32Q8TCD1 76 aa7.78□□□□□ -1.16
TRAF4-206ENST00000454852 HIST1H2BHQ93079 126 aa7.78□□□□□ -1.16
TRAF4-206ENST00000454852 HIST1H2BNQ99877 126 aa7.78□□□□□ -1.16
TRAF4-206ENST00000454852 HIST1H2BMQ99879 126 aa7.78□□□□□ -1.16
TRAF4-206ENST00000454852 NXT2Q9NPJ8 142 aaKnown RBP7.78□□□□□ -1.16
TRAF4-206ENST00000454852 NUDT3O95989 172 aa7.77□□□□□ -1.17
TRAF4-206ENST00000454852 PMCHP20382 165 aa7.77□□□□□ -1.17
TRAF4-206ENST00000454852 LYPD5Q6UWN5 251 aa7.77□□□□□ -1.17
TRAF4-206ENST00000454852 Q8N8P6 123 aa7.77□□□□□ -1.17
TRAF4-206ENST00000454852 VPS13DQ5THJ4 4388 aa7.76□□□□□ -1.17
TRAF4-206ENST00000454852 NDUFA6P56556 154 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms