RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ATP6V0E2Q8NHE4 81 aa3.92□□□□□ -1.78
LINC00342-201ENST00000412393 MUC7Q8TAX7 377 aa3.92□□□□□ -1.78
LINC00342-201ENST00000412393 ZNF502Q8TBZ5 544 aa3.92□□□□□ -1.78
LINC00342-201ENST00000412393 DAZAP1Q96EP5 407 aaKnown RBP3.92□□□□□ -1.78
LINC00342-201ENST00000412393 CNFNQ9BYD5 112 aa3.92□□□□□ -1.78
LINC00342-201ENST00000412393 HHLA3Q9XRX5 114 aa3.92□□□□□ -1.78
LINC00342-201ENST00000412393 SELENOKQ9Y6D0 94 aa3.92□□□□□ -1.78
LINC00342-201ENST00000412393 KMT2CQ8NEZ4 4911 aaKnown RBP3.91□□□□□ -1.78
LINC00342-201ENST00000412393 STAB2Q8WWQ8 2551 aa3.91□□□□□ -1.78
LINC00342-201ENST00000412393 IGHV3-35A0A0C4DH35 117 aa3.91□□□□□ -1.78
LINC00342-201ENST00000412393 TMEM213A2RRL7 107 aa3.91□□□□□ -1.78
LINC00342-201ENST00000412393 PGPA6NDG6 321 aa3.91□□□□□ -1.78
LINC00342-201ENST00000412393 CHEK1O14757 476 aa3.91□□□□□ -1.78
LINC00342-201ENST00000412393 CD7P09564 240 aa3.91□□□□□ -1.78
LINC00342-201ENST00000412393 WT1-ASQ06250 92 aa3.91□□□□□ -1.78
LINC00342-201ENST00000412393 GAGE5Q13069 117 aa3.91□□□□□ -1.78
LINC00342-201ENST00000412393 GAGE6Q13070 117 aa3.91□□□□□ -1.78
LINC00342-201ENST00000412393 FAM104BQ5XKR9 115 aa3.91□□□□□ -1.78
LINC00342-201ENST00000412393 TMEM61Q8N0U2 210 aa3.91□□□□□ -1.78
LINC00342-201ENST00000412393 LINC01600Q96MT4 127 aa3.91□□□□□ -1.78
LINC00342-201ENST00000412393 GTSF1LQ9H1H1 148 aa3.91□□□□□ -1.78
LINC00342-201ENST00000412393 FNDC4Q9H6D8 234 aaPredicted RBP3.91□□□□□ -1.78
LINC00342-201ENST00000412393 SPANXB1Q9NS25 103 aaPredicted RBP3.91□□□□□ -1.78
LINC00342-201ENST00000412393 SPANXCQ9NY87 97 aa3.91□□□□□ -1.78
LINC00342-201ENST00000412393 ERG28Q9UKR5 140 aa3.91□□□□□ -1.78
LINC00342-201ENST00000412393 F11RQ9Y624 299 aaKnown RBP3.91□□□□□ -1.78
LINC00342-201ENST00000412393 SPCS1Q9Y6A9 102 aa3.91□□□□□ -1.78
LINC00342-201ENST00000412393 TENM3Q9P273 2699 aa3.91□□□□□ -1.78
LINC00342-201ENST00000412393 IGHV3-21A0A0B4J1V1 117 aa3.9□□□□□ -1.79
LINC00342-201ENST00000412393 TRAV5A0A0B4J249 113 aa3.9□□□□□ -1.79
LINC00342-201ENST00000412393 TRAV25A0A0B4J276 109 aa3.9□□□□□ -1.79
LINC00342-201ENST00000412393 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.9□□□□□ -1.79
LINC00342-201ENST00000412393 H3BUT2 72 aa3.9□□□□□ -1.79
LINC00342-201ENST00000412393 M0QXV9 152 aa3.9□□□□□ -1.79
LINC00342-201ENST00000412393 HBDP02042 147 aa3.9□□□□□ -1.79
LINC00342-201ENST00000412393 SLC25A5P05141 298 aaKnown RBP3.9□□□□□ -1.79
LINC00342-201ENST00000412393 PDE6HQ13956 83 aa3.9□□□□□ -1.79
LINC00342-201ENST00000412393 CASC10Q5T4H9 136 aa3.9□□□□□ -1.79
LINC00342-201ENST00000412393 UNQ9165/PRO28630Q6UXU0 137 aa3.9□□□□□ -1.79
LINC00342-201ENST00000412393 LINC00305Q7Z4B0 112 aa3.9□□□□□ -1.79
LINC00342-201ENST00000412393 PGLYRP4Q96LB8 373 aa3.9□□□□□ -1.79
LINC00342-201ENST00000412393 SLC25A39Q9BZJ4 359 aaPredicted RBP3.9□□□□□ -1.79
LINC00342-201ENST00000412393 WFDC10AQ9H1F0 79 aa3.9□□□□□ -1.79
LINC00342-201ENST00000412393 C21orf62Q9NYP8 219 aa3.9□□□□□ -1.79
LINC00342-201ENST00000412393 CYSLTR1Q9Y271 337 aa3.9□□□□□ -1.79
LINC00342-201ENST00000412393 UFC1Q9Y3C8 167 aa3.9□□□□□ -1.79
LINC00342-201ENST00000412393 DNAH7Q8WXX0 4024 aa3.9□□□□□ -1.79
LINC00342-201ENST00000412393 RBMY1BA6NDE4 496 aaKnown RBP3.89□□□□□ -1.79
LINC00342-201ENST00000412393 RBMY1EA6NEQ0 496 aaKnown RBP3.89□□□□□ -1.79
LINC00342-201ENST00000412393 K7EIM0 57 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 NDUFA4O00483 81 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 ATP5LO75964 103 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 RBMY1DP0C7P1 496 aaKnown RBP3.89□□□□□ -1.79
LINC00342-201ENST00000412393 PYYP10082 97 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 MFAP4P55083 255 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 TCTAP57738 103 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 HERV-K104P63124 156 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 C5orf47Q569G3 176 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 ZFAND6Q6FIF0 208 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 Q86TA4 180 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 ORMDL3Q8N138 153 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 NPIPB3Q92617 1050 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 IFI27L1Q96BM0 104 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 C1orf43Q9BWL3 253 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 Q9H3A6 140 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 EDA2RQ9HAV5 297 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 RETNQ9HD89 108 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 DAZ1Q9NQZ3 744 aaKnown RBP3.89□□□□□ -1.79
LINC00342-201ENST00000412393 PRO0461Q9UI25 63 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 PSG8Q9UQ74 426 aa3.89□□□□□ -1.79
LINC00342-201ENST00000412393 DYNC2H1Q8NCM8 4307 aaKnown RBP3.89□□□□□ -1.79
LINC00342-201ENST00000412393 TRBV19A0A075B6N1 114 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 TEX48A0A1B0GUV7 120 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 H3BMG7 143 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 I3L2K1 104 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 K7EMI3 77 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 K7EMT4 169 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 MRPS12O15235 138 aaKnown RBP3.88□□□□□ -1.79
LINC00342-201ENST00000412393 NCR2O95944 276 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 IGHV3-48P01763 117 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 CTSGP08311 255 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 IGLC6P0CF74 106 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 FCER1GP30273 86 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 FCGR2BP31994 310 aaPredicted RBP3.88□□□□□ -1.79
LINC00342-201ENST00000412393 CRIP1P50238 77 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 RPL32P62910 135 aaKnown RBP3.88□□□□□ -1.79
LINC00342-201ENST00000412393 CEND1Q8N111 149 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 ZNF414Q96IQ9 312 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 SPAG8Q99932 426 aaPredicted RBP3.88□□□□□ -1.79
LINC00342-201ENST00000412393 ANAPC13Q9BS18 74 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 C1QTNF4Q9BXJ3 329 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 NXT2Q9NPJ8 142 aaKnown RBP3.88□□□□□ -1.79
LINC00342-201ENST00000412393 SACSQ9NZJ4 4579 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 NBEAL2Q6ZNJ1 2754 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 AGRNO00468 2067 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 RYR3Q15413 4870 aa3.88□□□□□ -1.79
LINC00342-201ENST00000412393 IGHV3OR16-8A0A075B7F1 116 aa3.87□□□□□ -1.79
LINC00342-201ENST00000412393 IGLL5B9A064 214 aa3.87□□□□□ -1.79
LINC00342-201ENST00000412393 ARMS2P0C7Q2 107 aa3.87□□□□□ -1.79
LINC00342-201ENST00000412393 IFI27P40305 119 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms