RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 RPL39LQ96EH5 51 aaKnown RBP10.34□□□□□ -0.75
LDB3-204ENST00000372066 LINC00467Q9BRT7 94 aa10.34□□□□□ -0.75
LDB3-204ENST00000372066 MAP6D1Q9H9H5 199 aa10.34□□□□□ -0.75
LDB3-204ENST00000372066 A0A087WX48 190 aa10.33□□□□□ -0.76
LDB3-204ENST00000372066 PLNP26678 52 aa10.33□□□□□ -0.76
LDB3-204ENST00000372066 SUMO4Q6EEV6 95 aa10.33□□□□□ -0.76
LDB3-204ENST00000372066 PTH2Q96A98 100 aa10.33□□□□□ -0.76
LDB3-204ENST00000372066 DKK2Q9UBU2 259 aa10.33□□□□□ -0.76
LDB3-204ENST00000372066 ZNF256Q9Y2P7 627 aaPredicted RBP10.33□□□□□ -0.76
LDB3-204ENST00000372066 AGRNO00468 2067 aa10.33□□□□□ -0.76
LDB3-204ENST00000372066 VCYO14598 125 aa10.32□□□□□ -0.76
LDB3-204ENST00000372066 SPRY2O43597 315 aa10.32□□□□□ -0.76
LDB3-204ENST00000372066 FGF6P10767 208 aa10.32□□□□□ -0.76
LDB3-204ENST00000372066 NBEAL2Q6ZNJ1 2754 aa10.32□□□□□ -0.76
LDB3-204ENST00000372066 CSTL1Q9H114 145 aa10.32□□□□□ -0.76
LDB3-204ENST00000372066 EDA2RQ9HAV5 297 aa10.32□□□□□ -0.76
LDB3-204ENST00000372066 CBY3A6NI87 242 aa10.31□□□□□ -0.76
LDB3-204ENST00000372066 KNCNA6PVL3 124 aa10.31□□□□□ -0.76
LDB3-204ENST00000372066 POLR2KP53803 58 aaKnown RBP10.31□□□□□ -0.76
LDB3-204ENST00000372066 RAX2Q96IS3 184 aa10.31□□□□□ -0.76
LDB3-204ENST00000372066 SCGB3A1Q96QR1 104 aa10.31□□□□□ -0.76
LDB3-204ENST00000372066 KIR2DL4Q99706 377 aa10.31□□□□□ -0.76
LDB3-204ENST00000372066 MDFICQ9P1T7 246 aa10.31□□□□□ -0.76
LDB3-204ENST00000372066 H7C1H1 209 aa10.31□□□□□ -0.76
LDB3-204ENST00000372066 CCL24O00175 119 aa10.31□□□□□ -0.76
LDB3-204ENST00000372066 CMC4P56277 68 aaPredicted RBP10.31□□□□□ -0.76
LDB3-204ENST00000372066 ZNF415Q09FC8 603 aa10.31□□□□□ -0.76
LDB3-204ENST00000372066 BVES-AS1Q5T3Y7 98 aa10.31□□□□□ -0.76
LDB3-204ENST00000372066 C2orf66Q6UXQ4 117 aa10.31□□□□□ -0.76
LDB3-204ENST00000372066 C2orf91Q6ZV80 131 aa10.31□□□□□ -0.76
LDB3-204ENST00000372066 TRPT1Q86TN4 253 aaKnown RBP10.31□□□□□ -0.76
LDB3-204ENST00000372066 DUX3Q96PT4 197 aa10.31□□□□□ -0.76
LDB3-204ENST00000372066 CYSLTR1Q9Y271 337 aa10.31□□□□□ -0.76
LDB3-204ENST00000372066 KMT2CQ8NEZ4 4911 aaKnown RBP10.3□□□□□ -0.76
LDB3-204ENST00000372066 TRBV27A0A0K0K1C4 114 aa10.3□□□□□ -0.76
LDB3-204ENST00000372066 F5H697 171 aa10.3□□□□□ -0.76
LDB3-204ENST00000372066 F8VRH5 84 aa10.3□□□□□ -0.76
LDB3-204ENST00000372066 CRYGDP07320 174 aa10.3□□□□□ -0.76
LDB3-204ENST00000372066 ZNF56Q15929 161 aa10.3□□□□□ -0.76
LDB3-204ENST00000372066 MPV17L2Q567V2 206 aa10.3□□□□□ -0.76
LDB3-204ENST00000372066 ERASQ7Z444 233 aa10.3□□□□□ -0.76
LDB3-204ENST00000372066 HHLA3Q9XRX5 114 aa10.3□□□□□ -0.76
LDB3-204ENST00000372066 A0A087WWL8 130 aa10.29□□□□□ -0.76
LDB3-204ENST00000372066 NPSP0C0P6 89 aa10.29□□□□□ -0.76
LDB3-204ENST00000372066 EGFEM1PQ0D2K5 195 aa10.29□□□□□ -0.76
LDB3-204ENST00000372066 CD300EQ496F6 205 aaPredicted RBP10.29□□□□□ -0.76
LDB3-204ENST00000372066 LINC00482Q8N8I6 264 aa10.29□□□□□ -0.76
LDB3-204ENST00000372066 RBMY1BA6NDE4 496 aaKnown RBP10.28□□□□□ -0.76
LDB3-204ENST00000372066 RBMY1EA6NEQ0 496 aaKnown RBP10.28□□□□□ -0.76
LDB3-204ENST00000372066 INSP01308 110 aa10.28□□□□□ -0.76
LDB3-204ENST00000372066 RBMY1DP0C7P1 496 aaKnown RBP10.28□□□□□ -0.76
LDB3-204ENST00000372066 SEC11AP67812 179 aa10.28□□□□□ -0.76
LDB3-204ENST00000372066 RHOHQ15669 191 aa10.28□□□□□ -0.76
LDB3-204ENST00000372066 ZNF876PQ49A33 203 aa10.28□□□□□ -0.76
LDB3-204ENST00000372066 JPT2Q9H910 190 aa10.28□□□□□ -0.76
LDB3-204ENST00000372066 MRPL35Q9NZE8 188 aaKnown RBP10.28□□□□□ -0.76
LDB3-204ENST00000372066 CBY1Q9Y3M2 126 aa10.28□□□□□ -0.76
LDB3-204ENST00000372066 COX11Q9Y6N1 276 aa10.28□□□□□ -0.76
LDB3-204ENST00000372066 SDHAF1A6NFY7 115 aa10.27□□□□□ -0.76
LDB3-204ENST00000372066 A8MWV9 139 aa10.27□□□□□ -0.76
LDB3-204ENST00000372066 M0QY20 66 aa10.27□□□□□ -0.76
LDB3-204ENST00000372066 M0R2P5 195 aa10.27□□□□□ -0.76
LDB3-204ENST00000372066 RBMY1A1P0DJD3 496 aaKnown RBP10.27□□□□□ -0.76
LDB3-204ENST00000372066 RBMY1CP0DJD4 496 aa10.27□□□□□ -0.76
LDB3-204ENST00000372066 NMUP48645 174 aa10.27□□□□□ -0.76
LDB3-204ENST00000372066 HSD52Q0P140 79 aa10.27□□□□□ -0.76
LDB3-204ENST00000372066 RBMY1FQ15415 496 aaKnown RBP10.27□□□□□ -0.76
LDB3-204ENST00000372066 TMEM97Q5BJF2 176 aa10.27□□□□□ -0.76
LDB3-204ENST00000372066 FAM74A4Q5TZK3 123 aa10.27□□□□□ -0.76
LDB3-204ENST00000372066 NEXN-AS1Q8NBZ9 246 aa10.27□□□□□ -0.76
LDB3-204ENST00000372066 TMEM141Q96I45 108 aa10.27□□□□□ -0.76
LDB3-204ENST00000372066 SPXQ9BT56 116 aa10.27□□□□□ -0.76
LDB3-204ENST00000372066 HIGD1BQ9P298 99 aa10.27□□□□□ -0.76
LDB3-204ENST00000372066 DNAH9Q9NYC9 4486 aa10.27□□□□□ -0.77
LDB3-204ENST00000372066 PAPPA-AS1Q5QFB9 102 aa10.26□□□□□ -0.77
LDB3-204ENST00000372066 ZC2HC1BQ5TFG8 222 aa10.26□□□□□ -0.77
LDB3-204ENST00000372066 ZFP2Q6ZN57 461 aa10.26□□□□□ -0.77
LDB3-204ENST00000372066 WWC2-AS2Q96NR7 200 aa10.26□□□□□ -0.77
LDB3-204ENST00000372066 TIMM17AQ99595 171 aa10.26□□□□□ -0.77
LDB3-204ENST00000372066 B9D2Q9BPU9 175 aa10.26□□□□□ -0.77
LDB3-204ENST00000372066 TP73-AS1Q9UF72 201 aa10.26□□□□□ -0.77
LDB3-204ENST00000372066 CHTOPQ9Y3Y2 248 aaKnown RBP10.26□□□□□ -0.77
LDB3-204ENST00000372066 UBE2V1Q13404 147 aa10.26□□□□□ -0.77
LDB3-204ENST00000372066 FAM110AQ9BQ89 295 aa10.26□□□□□ -0.77
LDB3-204ENST00000372066 RHODO00212 210 aa10.25□□□□□ -0.77
LDB3-204ENST00000372066 ODF3L2Q3SX64 289 aa10.25□□□□□ -0.77
LDB3-204ENST00000372066 BAALCQ8WXS3 180 aa10.25□□□□□ -0.77
LDB3-204ENST00000372066 OR11H12B2RN74 326 aa10.24□□□□□ -0.77
LDB3-204ENST00000372066 STHQ8IWL8 128 aa10.24□□□□□ -0.77
LDB3-204ENST00000372066 TP53TG1Q9Y2A0 90 aa10.24□□□□□ -0.77
LDB3-204ENST00000372066 A6NDN8 102 aa10.23□□□□□ -0.77
LDB3-204ENST00000372066 MORN3Q6PF18 240 aaPredicted RBP10.23□□□□□ -0.77
LDB3-204ENST00000372066 RYR3Q15413 4870 aa10.23□□□□□ -0.77
LDB3-204ENST00000372066 IGIPA6NJ69 53 aa10.22□□□□□ -0.77
LDB3-204ENST00000372066 K7EP13 123 aa10.22□□□□□ -0.77
LDB3-204ENST00000372066 GTSCR1Q86UQ5 136 aa10.22□□□□□ -0.77
LDB3-204ENST00000372066 PCP2Q8IVA1 136 aa10.22□□□□□ -0.77
LDB3-204ENST00000372066 LINC01587Q99440 93 aa10.22□□□□□ -0.77
LDB3-204ENST00000372066 SORL1Q92673 2214 aa10.22□□□□□ -0.77
LDB3-204ENST00000372066 I3L3M4 83 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms