RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 C16orf74Q96GX8 76 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 LINC01587Q99440 93 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 SIGMAR1Q99720 223 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 HIST1H2BLQ99880 126 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 SLC25A39Q9BZJ4 359 aaPredicted RBP4.01□□□□□ -1.77
VPS33B-207ENST00000557470 SLC25A22Q9H936 323 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 NOP10Q9NPE3 64 aaKnown RBP4.01□□□□□ -1.77
VPS33B-207ENST00000557470 OR5AC2Q9NZP5 309 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 NAT8Q9UHE5 227 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 MRPS16Q9Y3D3 137 aaKnown RBP4.01□□□□□ -1.77
VPS33B-207ENST00000557470 TIMM8BQ9Y5J9 83 aaPredicted RBP4.01□□□□□ -1.77
VPS33B-207ENST00000557470 IGKV1OR2-108A0A075B7D4 117 aa4□□□□□ -1.77
VPS33B-207ENST00000557470 FXYD6-FXYD2A0A087WZ82 144 aa4□□□□□ -1.77
VPS33B-207ENST00000557470 TRAV8-2A0A0B4J237 113 aa4□□□□□ -1.77
VPS33B-207ENST00000557470 J3QR89 54 aa4□□□□□ -1.77
VPS33B-207ENST00000557470 DUSP14O95147 198 aaKnown RBP4□□□□□ -1.77
VPS33B-207ENST00000557470 SFTA3P0C7M3 94 aa4□□□□□ -1.77
VPS33B-207ENST00000557470 DNAH10OSP0CZ25 163 aa4□□□□□ -1.77
VPS33B-207ENST00000557470 PRB4P10163 310 aaPredicted RBP4□□□□□ -1.77
VPS33B-207ENST00000557470 TPT1P13693 172 aaKnown RBP4□□□□□ -1.77
VPS33B-207ENST00000557470 AKR1C4P17516 323 aa4□□□□□ -1.77
VPS33B-207ENST00000557470 S100A7P31151 101 aa4□□□□□ -1.77
VPS33B-207ENST00000557470 HAMPP81172 84 aa4□□□□□ -1.77
VPS33B-207ENST00000557470 GCSAMLQ5JQS6 135 aa4□□□□□ -1.77
VPS33B-207ENST00000557470 FAAP20Q6NZ36 180 aa4□□□□□ -1.77
VPS33B-207ENST00000557470 TMEM256Q8N2U0 113 aa4□□□□□ -1.77
VPS33B-207ENST00000557470 OR51S1Q8NGJ8 323 aa4□□□□□ -1.77
VPS33B-207ENST00000557470 OR10J6PQ8NGY7 276 aa4□□□□□ -1.77
VPS33B-207ENST00000557470 TRGV9Q99603 122 aa4□□□□□ -1.77
VPS33B-207ENST00000557470 RTBDNQ9BSG5 229 aaPredicted RBP4□□□□□ -1.77
VPS33B-207ENST00000557470 NAA60Q9H7X0 242 aa4□□□□□ -1.77
VPS33B-207ENST00000557470 CACFD1Q9UGQ2 172 aa4□□□□□ -1.77
VPS33B-207ENST00000557470 C14orf166Q9Y224 244 aaKnown RBP4□□□□□ -1.77
VPS33B-207ENST00000557470 B4DEV8 164 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 HIST1H2BKO60814 126 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 HIST1H2BJP06899 126 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 OR5G3P0C626 314 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 ESDP10768 282 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 HIST1H2BOP23527 126 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 HIST1H2BBP33778 126 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 SULT1A1P50225 295 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 HIST1H2BDP58876 126 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 TAS2R19P59542 299 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 HIST1H2BCP62807 126 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 HIST1H1AQ02539 215 aaPredicted RBP3.99□□□□□ -1.77
VPS33B-207ENST00000557470 SSBP1Q04837 148 aaKnown RBP3.99□□□□□ -1.77
VPS33B-207ENST00000557470 TAL2Q16559 108 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 HIST2H2BEQ16778 126 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.99□□□□□ -1.77
VPS33B-207ENST00000557470 ZNF493Q6ZR52 646 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 LINC00612Q8N6U2 182 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 TMEM229BQ8NBD8 167 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 TMEM263Q8WUH6 116 aaKnown RBP3.99□□□□□ -1.77
VPS33B-207ENST00000557470 HIST1H2BHQ93079 126 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 C2orf48Q96LS8 159 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 HIST1H2BNQ99877 126 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 HIST1H2BMQ99879 126 aa3.99□□□□□ -1.77
VPS33B-207ENST00000557470 PSMG3Q9BT73 122 aaPredicted RBP3.99□□□□□ -1.77
VPS33B-207ENST00000557470 IGSF23A1L1A6 192 aa3.98□□□□□ -1.77
VPS33B-207ENST00000557470 CRYM-AS1A6NIL9 109 aa3.98□□□□□ -1.77
VPS33B-207ENST00000557470 H3BNG1 76 aa3.98□□□□□ -1.77
VPS33B-207ENST00000557470 ORM1P02763 201 aa3.98□□□□□ -1.77
VPS33B-207ENST00000557470 AKAIN1P0CW23 69 aa3.98□□□□□ -1.77
VPS33B-207ENST00000557470 ORM2P19652 201 aa3.98□□□□□ -1.77
VPS33B-207ENST00000557470 GATA2P23769 480 aaPredicted RBP3.98□□□□□ -1.77
VPS33B-207ENST00000557470 FAUP35544 74 aaKnown RBP3.98□□□□□ -1.77
VPS33B-207ENST00000557470 RHOBP62745 196 aa3.98□□□□□ -1.77
VPS33B-207ENST00000557470 OR8A1Q8NGG7 326 aa3.98□□□□□ -1.77
VPS33B-207ENST00000557470 PTH2Q96A98 100 aa3.98□□□□□ -1.77
VPS33B-207ENST00000557470 BTF3L4Q96K17 158 aa3.98□□□□□ -1.77
VPS33B-207ENST00000557470 GPR82Q96P67 336 aa3.98□□□□□ -1.77
VPS33B-207ENST00000557470 CIB3Q96Q77 187 aaPredicted RBP3.98□□□□□ -1.77
VPS33B-207ENST00000557470 ZNF471Q9BX82 626 aaPredicted RBP3.98□□□□□ -1.77
VPS33B-207ENST00000557470 PPDPFQ9H3Y8 114 aa3.98□□□□□ -1.77
VPS33B-207ENST00000557470 SPANXCQ9NY87 97 aa3.98□□□□□ -1.77
VPS33B-207ENST00000557470 HMCN2Q8NDA2 5059 aa3.97□□□□□ -1.77
VPS33B-207ENST00000557470 IGLV5-45A0A087WSX0 123 aa3.97□□□□□ -1.77
VPS33B-207ENST00000557470 A0A087WTM6 91 aa3.97□□□□□ -1.77
VPS33B-207ENST00000557470 A0A096LPF7 62 aa3.97□□□□□ -1.77
VPS33B-207ENST00000557470 IGLV5-52A0A0A0MRZ9 124 aa3.97□□□□□ -1.77
VPS33B-207ENST00000557470 H7BYZ3 331 aa3.97□□□□□ -1.77
VPS33B-207ENST00000557470 NXPH4O95158 308 aa3.97□□□□□ -1.77
VPS33B-207ENST00000557470 GAGE5Q13069 117 aa3.97□□□□□ -1.77
VPS33B-207ENST00000557470 GAGE6Q13070 117 aa3.97□□□□□ -1.77
VPS33B-207ENST00000557470 GTF2H5Q6ZYL4 71 aa3.97□□□□□ -1.77
VPS33B-207ENST00000557470 IL22RA2Q969J5 263 aa3.97□□□□□ -1.77
VPS33B-207ENST00000557470 VSIG2Q96IQ7 327 aa3.97□□□□□ -1.77
VPS33B-207ENST00000557470 YPEL4Q96NS1 127 aa3.97□□□□□ -1.77
VPS33B-207ENST00000557470 IMMP2LQ96T52 175 aa3.97□□□□□ -1.77
VPS33B-207ENST00000557470 TMEM147Q9BVK8 224 aa3.97□□□□□ -1.77
VPS33B-207ENST00000557470 TMEM242Q9NWH2 141 aa3.97□□□□□ -1.77
VPS33B-207ENST00000557470 UQCR10Q9UDW1 63 aa3.97□□□□□ -1.77
VPS33B-207ENST00000557470 A0A0B4J2A0 478 aa3.96□□□□□ -1.78
VPS33B-207ENST00000557470 H3BRN7 92 aa3.96□□□□□ -1.78
VPS33B-207ENST00000557470 TYMSP04818 313 aa3.96□□□□□ -1.78
VPS33B-207ENST00000557470 IAPPP10997 89 aa3.96□□□□□ -1.78
VPS33B-207ENST00000557470 HNRNPA3P51991 378 aaKnown RBP3.96□□□□□ -1.78
VPS33B-207ENST00000557470 S100A10P60903 97 aa3.96□□□□□ -1.78
VPS33B-207ENST00000557470 BATFQ16520 125 aa3.96□□□□□ -1.78
VPS33B-207ENST00000557470 IAH1Q2TAA2 248 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms