RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 TIMM17AQ99595 171 aa11.49□□□□□ -0.57
ARHGEF40-207ENST00000556399 UNQ9165/PRO28630Q6UXU0 137 aa11.48□□□□□ -0.57
ARHGEF40-207ENST00000556399 ZNRF2Q8NHG8 242 aa11.48□□□□□ -0.57
ARHGEF40-207ENST00000556399 BLCAPP62952 87 aa11.48□□□□□ -0.57
ARHGEF40-207ENST00000556399 LINC01356Q8N9X3 169 aa11.48□□□□□ -0.57
ARHGEF40-207ENST00000556399 SIRPDQ9H106 197 aa11.48□□□□□ -0.57
ARHGEF40-207ENST00000556399 CRYBA4P53673 196 aa11.47□□□□□ -0.57
ARHGEF40-207ENST00000556399 ATP6V0E2Q8NHE4 81 aa11.47□□□□□ -0.57
ARHGEF40-207ENST00000556399 JPT2Q9H910 190 aa11.47□□□□□ -0.57
ARHGEF40-207ENST00000556399 LINC01548A6NM66 108 aa11.47□□□□□ -0.57
ARHGEF40-207ENST00000556399 SPG11Q96JI7 2443 aa11.47□□□□□ -0.57
ARHGEF40-207ENST00000556399 GAGE12JA6NER3 117 aa11.47□□□□□ -0.57
ARHGEF40-207ENST00000556399 B5MCH6 92 aa11.47□□□□□ -0.57
ARHGEF40-207ENST00000556399 GAGE4Q13068 117 aa11.47□□□□□ -0.57
ARHGEF40-207ENST00000556399 GAGE5Q13069 117 aa11.47□□□□□ -0.57
ARHGEF40-207ENST00000556399 NDUFA11Q86Y39 141 aa11.47□□□□□ -0.57
ARHGEF40-207ENST00000556399 PIFOQ8TCI5 191 aa11.47□□□□□ -0.57
ARHGEF40-207ENST00000556399 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.46□□□□□ -0.57
ARHGEF40-207ENST00000556399 IGKV2-29A2NJV5 120 aaPredicted RBP11.46□□□□□ -0.57
ARHGEF40-207ENST00000556399 TRBV12-3P01733 135 aa11.46□□□□□ -0.57
ARHGEF40-207ENST00000556399 MALP21145 153 aa11.46□□□□□ -0.57
ARHGEF40-207ENST00000556399 DSCAMO60469 2012 aa11.46□□□□□ -0.57
ARHGEF40-207ENST00000556399 GAS8-AS1O95177 125 aa11.46□□□□□ -0.57
ARHGEF40-207ENST00000556399 Q71RC1 249 aaPredicted RBP11.46□□□□□ -0.57
ARHGEF40-207ENST00000556399 OVOL2Q9BRP0 275 aa11.46□□□□□ -0.57
ARHGEF40-207ENST00000556399 GAGE7O76087 117 aa11.46□□□□□ -0.58
ARHGEF40-207ENST00000556399 GAGE12FP0CL80 117 aa11.46□□□□□ -0.58
ARHGEF40-207ENST00000556399 GAGE12GP0CL81 117 aa11.46□□□□□ -0.58
ARHGEF40-207ENST00000556399 GAGE12IP0CL82 117 aa11.46□□□□□ -0.58
ARHGEF40-207ENST00000556399 HTN3P15516 51 aa11.46□□□□□ -0.58
ARHGEF40-207ENST00000556399 GATA3P23771 443 aa11.46□□□□□ -0.58
ARHGEF40-207ENST00000556399 NEXN-AS1Q8NBZ9 246 aa11.46□□□□□ -0.58
ARHGEF40-207ENST00000556399 IGHV4-38-2P0DP08 117 aa11.45□□□□□ -0.58
ARHGEF40-207ENST00000556399 GAGE6Q13070 117 aa11.45□□□□□ -0.58
ARHGEF40-207ENST00000556399 LINC01620Q4KN68 170 aa11.45□□□□□ -0.58
ARHGEF40-207ENST00000556399 MAPK1IP1LQ8NDC0 245 aa11.45□□□□□ -0.58
ARHGEF40-207ENST00000556399 OTOGLQ3ZCN5 2332 aa11.45□□□□□ -0.58
ARHGEF40-207ENST00000556399 ADORA2A-AS1P86434 159 aa11.45□□□□□ -0.58
ARHGEF40-207ENST00000556399 C6orf226Q5I0X4 101 aa11.45□□□□□ -0.58
ARHGEF40-207ENST00000556399 Q8N1Y9 231 aa11.45□□□□□ -0.58
ARHGEF40-207ENST00000556399 ATRXP46100 2492 aa11.45□□□□□ -0.58
ARHGEF40-207ENST00000556399 IGF1P05019 195 aa11.45□□□□□ -0.58
ARHGEF40-207ENST00000556399 INAFM2P0DMQ5 153 aa11.45□□□□□ -0.58
ARHGEF40-207ENST00000556399 FSTL3O95633 263 aa11.44□□□□□ -0.58
ARHGEF40-207ENST00000556399 ZFAND3Q9H8U3 227 aa11.44□□□□□ -0.58
ARHGEF40-207ENST00000556399 EDA2RQ9HAV5 297 aa11.44□□□□□ -0.58
ARHGEF40-207ENST00000556399 HIST1H4AP62805 103 aaKnown RBP11.44□□□□□ -0.58
ARHGEF40-207ENST00000556399 SS18L2Q9UHA2 77 aa11.44□□□□□ -0.58
ARHGEF40-207ENST00000556399 TCL1BO95988 128 aa11.44□□□□□ -0.58
ARHGEF40-207ENST00000556399 C9orf153Q5TBE3 101 aa11.44□□□□□ -0.58
ARHGEF40-207ENST00000556399 COL4A2P08572 1712 aa11.44□□□□□ -0.58
ARHGEF40-207ENST00000556399 LINC01619G3V211 115 aa11.43□□□□□ -0.58
ARHGEF40-207ENST00000556399 RPL35AP18077 110 aaKnown RBP11.43□□□□□ -0.58
ARHGEF40-207ENST00000556399 HERVK_113P63121 156 aa11.43□□□□□ -0.58
ARHGEF40-207ENST00000556399 PRSS47A8MTI9 375 aa11.43□□□□□ -0.58
ARHGEF40-207ENST00000556399 OPRPNQ99935 248 aaPredicted RBP11.43□□□□□ -0.58
ARHGEF40-207ENST00000556399 IGHV4-61A0A0C4DH41 118 aa11.43□□□□□ -0.58
ARHGEF40-207ENST00000556399 PIEZO2Q9H5I5 2752 aa11.43□□□□□ -0.58
ARHGEF40-207ENST00000556399 GHRHP01286 108 aa11.42□□□□□ -0.58
ARHGEF40-207ENST00000556399 PRO3102Q9H379 93 aa11.42□□□□□ -0.58
ARHGEF40-207ENST00000556399 ICOSQ9Y6W8 199 aa11.42□□□□□ -0.58
ARHGEF40-207ENST00000556399 TNRC6BQ9UPQ9 1833 aaKnown RBP11.42□□□□□ -0.58
ARHGEF40-207ENST00000556399 TRAV26-1A0A087WT03 109 aa11.42□□□□□ -0.58
ARHGEF40-207ENST00000556399 IGHV4-59P01825 116 aa11.42□□□□□ -0.58
ARHGEF40-207ENST00000556399 UFSP1Q6NVU6 142 aa11.42□□□□□ -0.58
ARHGEF40-207ENST00000556399 Q9H8V8 135 aa11.42□□□□□ -0.58
ARHGEF40-207ENST00000556399 FBXL19-AS1Q494R0 122 aa11.42□□□□□ -0.58
ARHGEF40-207ENST00000556399 TET2Q6N021 2002 aaPredicted RBP11.42□□□□□ -0.58
ARHGEF40-207ENST00000556399 IGHG4P01861 327 aa11.41□□□□□ -0.58
ARHGEF40-207ENST00000556399 C11orf21Q9P2W6 132 aa11.41□□□□□ -0.58
ARHGEF40-207ENST00000556399 C5orf42Q9H799 3197 aa11.41□□□□□ -0.58
ARHGEF40-207ENST00000556399 HOXD3P31249 432 aaPredicted RBP11.41□□□□□ -0.58
ARHGEF40-207ENST00000556399 CFHR3Q02985 330 aa11.41□□□□□ -0.58
ARHGEF40-207ENST00000556399 NRACQ8N912 160 aa11.41□□□□□ -0.58
ARHGEF40-207ENST00000556399 C20orf173Q96LM9 149 aa11.41□□□□□ -0.58
ARHGEF40-207ENST00000556399 MDFICQ9P1T7 246 aa11.41□□□□□ -0.58
ARHGEF40-207ENST00000556399 HTTP42858 3142 aa11.4□□□□□ -0.58
ARHGEF40-207ENST00000556399 S100A7L2Q5SY68 101 aa11.4□□□□□ -0.58
ARHGEF40-207ENST00000556399 ELANEP08246 267 aa11.4□□□□□ -0.58
ARHGEF40-207ENST00000556399 MRPS12O15235 138 aaKnown RBP11.4□□□□□ -0.58
ARHGEF40-207ENST00000556399 PFN2P35080 140 aa11.4□□□□□ -0.58
ARHGEF40-207ENST00000556399 NSUN5P1Q3KNT7 163 aa11.4□□□□□ -0.58
ARHGEF40-207ENST00000556399 A0A0C4DFX4 3053 aa11.4□□□□□ -0.58
ARHGEF40-207ENST00000556399 EBI3Q14213 229 aa11.4□□□□□ -0.59
ARHGEF40-207ENST00000556399 DEFB112Q30KQ8 113 aa11.4□□□□□ -0.59
ARHGEF40-207ENST00000556399 TNFRSF13BO14836 293 aaPredicted RBP11.39□□□□□ -0.59
ARHGEF40-207ENST00000556399 Q6ZUT4 128 aa11.39□□□□□ -0.59
ARHGEF40-207ENST00000556399 A0A096LNJ9 63 aa11.39□□□□□ -0.59
ARHGEF40-207ENST00000556399 RNF223E7ERA6 249 aa11.39□□□□□ -0.59
ARHGEF40-207ENST00000556399 C20orf203Q8NBC4 194 aa11.39□□□□□ -0.59
ARHGEF40-207ENST00000556399 TMEM243Q9BU79 118 aa11.39□□□□□ -0.59
ARHGEF40-207ENST00000556399 MT-ATP8P03928 68 aa11.39□□□□□ -0.59
ARHGEF40-207ENST00000556399 HHLA3Q9XRX5 114 aa11.38□□□□□ -0.59
ARHGEF40-207ENST00000556399 K7EMT4 169 aa11.38□□□□□ -0.59
ARHGEF40-207ENST00000556399 IGHG2P01859 326 aa11.38□□□□□ -0.59
ARHGEF40-207ENST00000556399 DAND5Q8N907 189 aa11.38□□□□□ -0.59
ARHGEF40-207ENST00000556399 NBL1P41271 181 aa11.38□□□□□ -0.59
ARHGEF40-207ENST00000556399 CNFNQ9BYD5 112 aa11.38□□□□□ -0.59
ARHGEF40-207ENST00000556399 U3KQE9 123 aa11.38□□□□□ -0.59
ARHGEF40-207ENST00000556399 ZFAND2AQ8N6M9 145 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms