RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 LAMTOR2Q9Y2Q5 125 aa14.32□□□□□ -0.12
SSH1-209ENST00000551165 IGLV2-18A0A075B6J9 118 aa14.32□□□□□ -0.12
SSH1-209ENST00000551165 LEPROTL1O95214 131 aa14.32□□□□□ -0.12
SSH1-209ENST00000551165 CMC4P56277 68 aaPredicted RBP14.32□□□□□ -0.12
SSH1-209ENST00000551165 C11orf72Q8NBR9 251 aa14.32□□□□□ -0.12
SSH1-209ENST00000551165 FAM110AQ9BQ89 295 aa14.32□□□□□ -0.12
SSH1-209ENST00000551165 CRYGDP07320 174 aa14.31□□□□□ -0.12
SSH1-209ENST00000551165 PRIMA1Q86XR5 153 aa14.31□□□□□ -0.12
SSH1-209ENST00000551165 POM121L12Q8N7R1 296 aa14.31□□□□□ -0.12
SSH1-209ENST00000551165 TMEM208Q9BTX3 173 aa14.31□□□□□ -0.12
SSH1-209ENST00000551165 SMIM17P0DL12 118 aa14.3□□□□□ -0.12
SSH1-209ENST00000551165 C9orf66Q5T8R8 295 aa14.3□□□□□ -0.12
SSH1-209ENST00000551165 SUMO4Q6EEV6 95 aa14.3□□□□□ -0.12
SSH1-209ENST00000551165 SYT8Q8NBV8 401 aa14.3□□□□□ -0.12
SSH1-209ENST00000551165 MCRIP2Q9BUT9 160 aaKnown RBP14.3□□□□□ -0.12
SSH1-209ENST00000551165 PRO1933Q9H354 126 aa14.3□□□□□ -0.12
SSH1-209ENST00000551165 NUTF2P61970 127 aaKnown RBP14.29□□□□□ -0.12
SSH1-209ENST00000551165 TCAPO15273 167 aa14.29□□□□□ -0.12
SSH1-209ENST00000551165 ZNF664Q8N3J9 261 aa14.29□□□□□ -0.12
SSH1-209ENST00000551165 C20orf144Q9BQM9 153 aa14.29□□□□□ -0.12
SSH1-209ENST00000551165 STAB1Q9NY15 2570 aa14.28□□□□□ -0.12
SSH1-209ENST00000551165 MAST4O15021 2626 aa14.28□□□□□ -0.12
SSH1-209ENST00000551165 F5H697 171 aa14.28□□□□□ -0.12
SSH1-209ENST00000551165 IGLL1P15814 213 aa14.28□□□□□ -0.12
SSH1-209ENST00000551165 Q8N8P6 123 aa14.28□□□□□ -0.12
SSH1-209ENST00000551165 LINC00467Q9BRT7 94 aa14.28□□□□□ -0.12
SSH1-209ENST00000551165 DEFB104AQ8WTQ1 72 aa14.27□□□□□ -0.12
SSH1-209ENST00000551165 IGHV3-73A0A0B4J1V6 119 aa14.27□□□□□ -0.13
SSH1-209ENST00000551165 PRSS47A8MTI9 375 aa14.27□□□□□ -0.13
SSH1-209ENST00000551165 BTF3P20290 206 aaKnown RBP14.27□□□□□ -0.13
SSH1-209ENST00000551165 ZNF415Q09FC8 603 aa14.27□□□□□ -0.13
SSH1-209ENST00000551165 ATOH7Q8N100 152 aa14.27□□□□□ -0.13
SSH1-209ENST00000551165 NXT2Q9NPJ8 142 aaKnown RBP14.27□□□□□ -0.13
SSH1-209ENST00000551165 LINC01546A6NGU7 62 aa14.26□□□□□ -0.13
SSH1-209ENST00000551165 INSL3P51460 131 aa14.26□□□□□ -0.13
SSH1-209ENST00000551165 NEGR1Q7Z3B1 354 aa14.26□□□□□ -0.13
SSH1-209ENST00000551165 ZNF747Q9BV97 191 aa14.26□□□□□ -0.13
SSH1-209ENST00000551165 MRPL16Q9NX20 251 aaKnown RBP14.26□□□□□ -0.13
SSH1-209ENST00000551165 H0Y8G0 127 aa14.26□□□□□ -0.13
SSH1-209ENST00000551165 SUMO2P61956 95 aaKnown RBP14.25□□□□□ -0.13
SSH1-209ENST00000551165 CSNK1G2-AS1Q8NCQ2 148 aa14.25□□□□□ -0.13
SSH1-209ENST00000551165 TMEM70Q9BUB7 260 aa14.25□□□□□ -0.13
SSH1-209ENST00000551165 SYS1-DBNDD2H3BUS1 97 aa14.25□□□□□ -0.13
SSH1-209ENST00000551165 M0R2P5 195 aa14.25□□□□□ -0.13
SSH1-209ENST00000551165 ZNF56Q15929 161 aa14.25□□□□□ -0.13
SSH1-209ENST00000551165 TEX43Q6ZNM6 134 aa14.25□□□□□ -0.13
SSH1-209ENST00000551165 SMIM2Q9BVW6 85 aa14.25□□□□□ -0.13
SSH1-209ENST00000551165 S100A12P80511 92 aa14.24□□□□□ -0.13
SSH1-209ENST00000551165 MORN3Q6PF18 240 aaPredicted RBP14.24□□□□□ -0.13
SSH1-209ENST00000551165 WFDC9Q8NEX5 89 aa14.24□□□□□ -0.13
SSH1-209ENST00000551165 NACAE9PAV3 2078 aa14.24□□□□□ -0.13
SSH1-209ENST00000551165 HBDP02042 147 aa14.24□□□□□ -0.13
SSH1-209ENST00000551165 GTSCR1Q86UQ5 136 aa14.24□□□□□ -0.13
SSH1-209ENST00000551165 MAJINQ3KP22 176 aa14.23□□□□□ -0.13
SSH1-209ENST00000551165 RNASE8Q8TDE3 154 aaKnown RBP14.23□□□□□ -0.13
SSH1-209ENST00000551165 TMEM158Q8WZ71 300 aa14.23□□□□□ -0.13
SSH1-209ENST00000551165 PMCHL2Q9BQD1 86 aa14.23□□□□□ -0.13
SSH1-209ENST00000551165 M0QY20 66 aa14.22□□□□□ -0.13
SSH1-209ENST00000551165 C18orf15Q96N68 181 aa14.22□□□□□ -0.13
SSH1-209ENST00000551165 HSPB8Q9UJY1 196 aa14.22□□□□□ -0.13
SSH1-209ENST00000551165 C20orf78Q9BR46 151 aa14.22□□□□□ -0.13
SSH1-209ENST00000551165 CSTL1Q9H114 145 aa14.22□□□□□ -0.13
SSH1-209ENST00000551165 FCER1GP30273 86 aa14.21□□□□□ -0.13
SSH1-209ENST00000551165 Q6ZSN1 163 aa14.21□□□□□ -0.13
SSH1-209ENST00000551165 Q9UF83 564 aa14.21□□□□□ -0.13
SSH1-209ENST00000551165 PAM16Q9Y3D7 125 aa14.21□□□□□ -0.13
SSH1-209ENST00000551165 NBEAL2Q6ZNJ1 2754 aa14.21□□□□□ -0.14
SSH1-209ENST00000551165 UFSP1Q6NVU6 142 aa14.2□□□□□ -0.14
SSH1-209ENST00000551165 IL17DQ8TAD2 202 aa14.2□□□□□ -0.14
SSH1-209ENST00000551165 MAP1LC3CQ9BXW4 147 aa14.2□□□□□ -0.14
SSH1-209ENST00000551165 LINC00587B1AMM8 73 aa14.2□□□□□ -0.14
SSH1-209ENST00000551165 P0DMU3 169 aa14.2□□□□□ -0.14
SSH1-209ENST00000551165 FAM231AP0DMU4 169 aa14.2□□□□□ -0.14
SSH1-209ENST00000551165 FAM231CP0DMU5 169 aa14.2□□□□□ -0.14
SSH1-209ENST00000551165 LAGE3Q14657 143 aa14.2□□□□□ -0.14
SSH1-209ENST00000551165 CFAP126Q5VTH2 177 aa14.2□□□□□ -0.14
SSH1-209ENST00000551165 PKD1L1Q8TDX9 2849 aa14.2□□□□□ -0.14
SSH1-209ENST00000551165 SPXQ9BT56 116 aa14.19□□□□□ -0.14
SSH1-209ENST00000551165 ST20Q9HBF5 79 aa14.19□□□□□ -0.14
SSH1-209ENST00000551165 GOLT1BQ9Y3E0 138 aa14.19□□□□□ -0.14
SSH1-209ENST00000551165 PLAC8L1A1L4L8 177 aa14.18□□□□□ -0.14
SSH1-209ENST00000551165 PKIAP61925 76 aa14.18□□□□□ -0.14
SSH1-209ENST00000551165 C3orf56Q8N813 242 aa14.18□□□□□ -0.14
SSH1-209ENST00000551165 POLR2KP53803 58 aaKnown RBP14.18□□□□□ -0.14
SSH1-209ENST00000551165 ZNF705AQ6ZN79 300 aaPredicted RBP14.18□□□□□ -0.14
SSH1-209ENST00000551165 TMEM263Q8WUH6 116 aaKnown RBP14.18□□□□□ -0.14
SSH1-209ENST00000551165 Q6ZTI0 123 aa14.17□□□□□ -0.14
SSH1-209ENST00000551165 TRGV1A0A0A0MS02 117 aa14.17□□□□□ -0.14
SSH1-209ENST00000551165 A8MWV9 139 aa14.17□□□□□ -0.14
SSH1-209ENST00000551165 PTH2Q96A98 100 aa14.17□□□□□ -0.14
SSH1-209ENST00000551165 VAMP8Q9BV40 100 aa14.17□□□□□ -0.14
SSH1-209ENST00000551165 C1QTNF4Q9BXJ3 329 aa14.17□□□□□ -0.14
SSH1-209ENST00000551165 COL6A5A8TX70 2615 aa14.17□□□□□ -0.14
SSH1-209ENST00000551165 SDHAF1A6NFY7 115 aa14.16□□□□□ -0.14
SSH1-209ENST00000551165 OXLD1Q5BKU9 147 aa14.16□□□□□ -0.14
SSH1-209ENST00000551165 IFI27L1Q96BM0 104 aa14.16□□□□□ -0.14
SSH1-209ENST00000551165 NOP10Q9NPE3 64 aaKnown RBP14.16□□□□□ -0.14
SSH1-209ENST00000551165 NUDT3O95989 172 aa14.16□□□□□ -0.14
SSH1-209ENST00000551165 PPP1R17O96001 155 aa14.16□□□□□ -0.14
SSH1-209ENST00000551165 LINC00469Q8N7U9 141 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms