RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 KPRPQ5T749 579 aaPredicted RBP9.12□□□□□ -0.95
SMAD3-204ENST00000540846 DEFB125Q8N687 156 aa9.12□□□□□ -0.95
SMAD3-204ENST00000540846 NRACQ8N912 160 aa9.12□□□□□ -0.95
SMAD3-204ENST00000540846 Q8N976 141 aa9.12□□□□□ -0.95
SMAD3-204ENST00000540846 MAP1LC3AQ9H492 121 aa9.12□□□□□ -0.95
SMAD3-204ENST00000540846 LINC01546A6NGU7 62 aa9.11□□□□□ -0.95
SMAD3-204ENST00000540846 POM121L12Q8N7R1 296 aa9.11□□□□□ -0.95
SMAD3-204ENST00000540846 C20orf144Q9BQM9 153 aa9.11□□□□□ -0.95
SMAD3-204ENST00000540846 LOC389332A0A1B0GUA5 103 aa9.1□□□□□ -0.95
SMAD3-204ENST00000540846 PRSS47A8MTI9 375 aa9.1□□□□□ -0.95
SMAD3-204ENST00000540846 GATA1P15976 413 aaPredicted RBP9.1□□□□□ -0.95
SMAD3-204ENST00000540846 TRPT1Q86TN4 253 aaKnown RBP9.1□□□□□ -0.95
SMAD3-204ENST00000540846 LINC00467Q9BRT7 94 aa9.1□□□□□ -0.95
SMAD3-204ENST00000540846 MDFICQ9P1T7 246 aa9.1□□□□□ -0.95
SMAD3-204ENST00000540846 KIF25-AS1Q9Y6Z4 181 aa9.1□□□□□ -0.95
SMAD3-204ENST00000540846 TRAV26-2A0A0B4J265 109 aa9.09□□□□□ -0.95
SMAD3-204ENST00000540846 LEPROTL1O95214 131 aa9.09□□□□□ -0.95
SMAD3-204ENST00000540846 INSP01308 110 aa9.09□□□□□ -0.95
SMAD3-204ENST00000540846 TEX43Q6ZNM6 134 aa9.09□□□□□ -0.95
SMAD3-204ENST00000540846 GTSCR1Q86UQ5 136 aa9.09□□□□□ -0.95
SMAD3-204ENST00000540846 STHQ8IWL8 128 aa9.09□□□□□ -0.95
SMAD3-204ENST00000540846 C14orf178Q8N769 122 aaPredicted RBP9.09□□□□□ -0.95
SMAD3-204ENST00000540846 SYT8Q8NBV8 401 aa9.09□□□□□ -0.95
SMAD3-204ENST00000540846 NXT2Q9NPJ8 142 aaKnown RBP9.09□□□□□ -0.95
SMAD3-204ENST00000540846 A0A096LNJ9 63 aa9.08□□□□□ -0.96
SMAD3-204ENST00000540846 BTF3P20290 206 aaKnown RBP9.08□□□□□ -0.96
SMAD3-204ENST00000540846 LINC00315P59091 139 aa9.08□□□□□ -0.96
SMAD3-204ENST00000540846 IGLV2-18A0A075B6J9 118 aa9.07□□□□□ -0.96
SMAD3-204ENST00000540846 CBY3A6NI87 242 aa9.07□□□□□ -0.96
SMAD3-204ENST00000540846 PKIAP61925 76 aa9.07□□□□□ -0.96
SMAD3-204ENST00000540846 LINC00173Q6ZV60 143 aa9.07□□□□□ -0.96
SMAD3-204ENST00000540846 Q8N8P6 123 aa9.07□□□□□ -0.96
SMAD3-204ENST00000540846 HSPB8Q9UJY1 196 aa9.07□□□□□ -0.96
SMAD3-204ENST00000540846 HBDP02042 147 aa9.07□□□□□ -0.96
SMAD3-204ENST00000540846 RASL10AQ92737 203 aa9.07□□□□□ -0.96
SMAD3-204ENST00000540846 TMEM70Q9BUB7 260 aa9.07□□□□□ -0.96
SMAD3-204ENST00000540846 TSTD3H0UI37 97 aa9.06□□□□□ -0.96
SMAD3-204ENST00000540846 SYS1-DBNDD2H3BUS1 97 aa9.06□□□□□ -0.96
SMAD3-204ENST00000540846 MGPP08493 103 aa9.06□□□□□ -0.96
SMAD3-204ENST00000540846 SMIM17P0DL12 118 aa9.06□□□□□ -0.96
SMAD3-204ENST00000540846 ZNF415Q09FC8 603 aa9.06□□□□□ -0.96
SMAD3-204ENST00000540846 ZNF664Q8N3J9 261 aa9.06□□□□□ -0.96
SMAD3-204ENST00000540846 ZMAT5Q9UDW3 170 aaKnown RBP9.06□□□□□ -0.96
SMAD3-204ENST00000540846 KIR2DL5BA0A0G2JN68 375 aa9.05□□□□□ -0.96
SMAD3-204ENST00000540846 KIR2DL5BA0A0G2JPC4 375 aa9.05□□□□□ -0.96
SMAD3-204ENST00000540846 PPP1R17O96001 155 aa9.05□□□□□ -0.96
SMAD3-204ENST00000540846 GIG44P09565 113 aaPredicted RBP9.05□□□□□ -0.96
SMAD3-204ENST00000540846 CTAG1AP78358 180 aa9.05□□□□□ -0.96
SMAD3-204ENST00000540846 PIK3CD-AS1Q5SR53 167 aa9.05□□□□□ -0.96
SMAD3-204ENST00000540846 KIR2DL5AQ8N109 375 aa9.05□□□□□ -0.96
SMAD3-204ENST00000540846 C20orf78Q9BR46 151 aa9.05□□□□□ -0.96
SMAD3-204ENST00000540846 SMIM2Q9BVW6 85 aa9.05□□□□□ -0.96
SMAD3-204ENST00000540846 JPT2Q9H910 190 aa9.05□□□□□ -0.96
SMAD3-204ENST00000540846 SUMO2P61956 95 aaKnown RBP9.04□□□□□ -0.96
SMAD3-204ENST00000540846 NUTF2P61970 127 aaKnown RBP9.04□□□□□ -0.96
SMAD3-204ENST00000540846 C11orf72Q8NBR9 251 aa9.04□□□□□ -0.96
SMAD3-204ENST00000540846 PTH2Q96A98 100 aa9.04□□□□□ -0.96
SMAD3-204ENST00000540846 MAP1LC3CQ9BXW4 147 aa9.04□□□□□ -0.96
SMAD3-204ENST00000540846 XCL2Q9UBD3 114 aa9.04□□□□□ -0.96
SMAD3-204ENST00000540846 A0A087WWL8 130 aa9.03□□□□□ -0.96
SMAD3-204ENST00000540846 A8MZ25 164 aa9.03□□□□□ -0.96
SMAD3-204ENST00000540846 IGHV4-30-4P0DP06 118 aa9.03□□□□□ -0.96
SMAD3-204ENST00000540846 ZNF876PQ49A33 203 aa9.03□□□□□ -0.96
SMAD3-204ENST00000540846 SUMO4Q6EEV6 95 aa9.03□□□□□ -0.96
SMAD3-204ENST00000540846 PET117Q6UWS5 81 aa9.03□□□□□ -0.96
SMAD3-204ENST00000540846 SPATA12Q7Z6I5 190 aa9.03□□□□□ -0.96
SMAD3-204ENST00000540846 C1orf158Q8N1D5 194 aa9.03□□□□□ -0.96
SMAD3-204ENST00000540846 RPL39LQ96EH5 51 aaKnown RBP9.03□□□□□ -0.96
SMAD3-204ENST00000540846 LINC01587Q99440 93 aa9.03□□□□□ -0.96
SMAD3-204ENST00000540846 VAMP8Q9BV40 100 aa9.03□□□□□ -0.96
SMAD3-204ENST00000540846 PRO1933Q9H354 126 aa9.03□□□□□ -0.96
SMAD3-204ENST00000540846 MEGF8Q7Z7M0 2845 aa9.03□□□□□ -0.96
SMAD3-204ENST00000540846 PRB2P02812 416 aaPredicted RBP9.03□□□□□ -0.96
SMAD3-204ENST00000540846 CRYGDP07320 174 aa9.03□□□□□ -0.96
SMAD3-204ENST00000540846 FCER1GP30273 86 aa9.03□□□□□ -0.96
SMAD3-204ENST00000540846 RPL32P62910 135 aaKnown RBP9.03□□□□□ -0.96
SMAD3-204ENST00000540846 C20orf202A1L168 122 aa9.02□□□□□ -0.97
SMAD3-204ENST00000540846 LINC00587B1AMM8 73 aa9.02□□□□□ -0.97
SMAD3-204ENST00000540846 K7EIL1 84 aa9.02□□□□□ -0.97
SMAD3-204ENST00000540846 K7EMI3 77 aa9.02□□□□□ -0.97
SMAD3-204ENST00000540846 M0R2P5 195 aa9.02□□□□□ -0.97
SMAD3-204ENST00000540846 HTN1P15515 57 aa9.02□□□□□ -0.97
SMAD3-204ENST00000540846 RPL35AP18077 110 aaKnown RBP9.02□□□□□ -0.97
SMAD3-204ENST00000540846 SPXQ9BT56 116 aa9.02□□□□□ -0.97
SMAD3-204ENST00000540846 NACAE9PAV3 2078 aa9.01□□□□□ -0.97
SMAD3-204ENST00000540846 LAGE3Q14657 143 aa9.01□□□□□ -0.97
SMAD3-204ENST00000540846 FAM74A4Q5TZK3 123 aa9.01□□□□□ -0.97
SMAD3-204ENST00000540846 IL17DQ8TAD2 202 aa9.01□□□□□ -0.97
SMAD3-204ENST00000540846 TMEM208Q9BTX3 173 aa9.01□□□□□ -0.97
SMAD3-204ENST00000540846 NBEAL2Q6ZNJ1 2754 aa9□□□□□ -0.97
SMAD3-204ENST00000540846 TRBV6-5A0A0K0K1A5 114 aa9□□□□□ -0.97
SMAD3-204ENST00000540846 PRM2P04554 102 aa9□□□□□ -0.97
SMAD3-204ENST00000540846 DDTP30046 118 aa9□□□□□ -0.97
SMAD3-204ENST00000540846 ZNF56Q15929 161 aa9□□□□□ -0.97
SMAD3-204ENST00000540846 LINC01545Q5VT33 79 aa9□□□□□ -0.97
SMAD3-204ENST00000540846 MORN3Q6PF18 240 aaPredicted RBP9□□□□□ -0.97
SMAD3-204ENST00000540846 CSNK1G2-AS1Q8NCQ2 148 aa9□□□□□ -0.97
SMAD3-204ENST00000540846 NDUFAF3Q9BU61 184 aa9□□□□□ -0.97
SMAD3-204ENST00000540846 C1QTNF4Q9BXJ3 329 aa9□□□□□ -0.97
SMAD3-204ENST00000540846 EDA2RQ9HAV5 297 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms